RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
CASC9-204ENST00000523313 MED14O60244 1454 aa13.98□□□□□ -0.17
CASC9-204ENST00000523313 ATP7AQ04656 1500 aa13.97□□□□□ -0.17
CASC9-204ENST00000523313 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
CASC9-204ENST00000523313 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
CASC9-204ENST00000523313 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
CASC9-204ENST00000523313 SYNMO15061 1565 aa13.95□□□□□ -0.18
CASC9-204ENST00000523313 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
CASC9-204ENST00000523313 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
CASC9-204ENST00000523313 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
CASC9-204ENST00000523313 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
CASC9-204ENST00000523313 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
CASC9-204ENST00000523313 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
CASC9-204ENST00000523313 PZPP20742 1482 aa13.91□□□□□ -0.18
CASC9-204ENST00000523313 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
CASC9-204ENST00000523313 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
CASC9-204ENST00000523313 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
CASC9-204ENST00000523313 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
CASC9-204ENST00000523313 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
CASC9-204ENST00000523313 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
CASC9-204ENST00000523313 SRCAPQ6ZRS2 3230 aa13.87□□□□□ -0.19
CASC9-204ENST00000523313 GPATCH8Q9UKJ3 1502 aaKnown RBP13.86□□□□□ -0.19
CASC9-204ENST00000523313 EEA1Q15075 1411 aa13.86□□□□□ -0.19
CASC9-204ENST00000523313 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
CASC9-204ENST00000523313 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
CASC9-204ENST00000523313 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
CASC9-204ENST00000523313 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
CASC9-204ENST00000523313 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
CASC9-204ENST00000523313 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
CASC9-204ENST00000523313 KIF3BO15066 747 aa13.83□□□□□ -0.2
CASC9-204ENST00000523313 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
CASC9-204ENST00000523313 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
CASC9-204ENST00000523313 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
CASC9-204ENST00000523313 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
CASC9-204ENST00000523313 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
CASC9-204ENST00000523313 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
CASC9-204ENST00000523313 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
CASC9-204ENST00000523313 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
CASC9-204ENST00000523313 LRP6O75581 1613 aa13.79□□□□□ -0.2
CASC9-204ENST00000523313 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
CASC9-204ENST00000523313 JCADQ9P266 1359 aa13.78□□□□□ -0.2
CASC9-204ENST00000523313 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
CASC9-204ENST00000523313 LTKP29376 864 aa13.77□□□□□ -0.21
CASC9-204ENST00000523313 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.21
CASC9-204ENST00000523313 ZNF772Q68DY9 489 aaPredicted RBP13.76□□□□□ -0.21
CASC9-204ENST00000523313 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
CASC9-204ENST00000523313 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
CASC9-204ENST00000523313 TXNDC2Q86VQ3 553 aa13.75□□□□□ -0.21
CASC9-204ENST00000523313 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
CASC9-204ENST00000523313 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
CASC9-204ENST00000523313 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
CASC9-204ENST00000523313 RXRBP28702 533 aa13.74□□□□□ -0.21
CASC9-204ENST00000523313 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
CASC9-204ENST00000523313 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
CASC9-204ENST00000523313 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
CASC9-204ENST00000523313 LRRC9Q6ZRR7 1453 aa13.73□□□□□ -0.21
CASC9-204ENST00000523313 UBR1Q8IWV7 1749 aa13.72□□□□□ -0.21
CASC9-204ENST00000523313 ERVK-7P63135 1459 aa13.72□□□□□ -0.21
CASC9-204ENST00000523313 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
CASC9-204ENST00000523313 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
CASC9-204ENST00000523313 COL16A1Q07092 1604 aaPredicted RBP13.7□□□□□ -0.22
CASC9-204ENST00000523313 SLIT1O75093 1534 aa13.69□□□□□ -0.22
CASC9-204ENST00000523313 SPATA31A6Q5VVP1 1343 aa13.69□□□□□ -0.22
CASC9-204ENST00000523313 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
CASC9-204ENST00000523313 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
CASC9-204ENST00000523313 KCNA6P17658 529 aa13.68□□□□□ -0.22
CASC9-204ENST00000523313 ABCC3O15438 1527 aa13.68□□□□□ -0.22
CASC9-204ENST00000523313 FYCO1Q9BQS8 1478 aa13.67□□□□□ -0.22
CASC9-204ENST00000523313 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
CASC9-204ENST00000523313 MSH6P52701 1360 aa13.66□□□□□ -0.22
CASC9-204ENST00000523313 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
CASC9-204ENST00000523313 RGS12O14924 1447 aa13.65□□□□□ -0.22
CASC9-204ENST00000523313 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.22
CASC9-204ENST00000523313 PRDM15P57071 1507 aaPredicted RBP13.65□□□□□ -0.22
CASC9-204ENST00000523313 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
CASC9-204ENST00000523313 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
CASC9-204ENST00000523313 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
CASC9-204ENST00000523313 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
CASC9-204ENST00000523313 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
CASC9-204ENST00000523313 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
CASC9-204ENST00000523313 AFF2P51816 1311 aa13.63□□□□□ -0.23
CASC9-204ENST00000523313 TMEM2Q9UHN6 1383 aa13.62□□□□□ -0.23
CASC9-204ENST00000523313 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
CASC9-204ENST00000523313 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
CASC9-204ENST00000523313 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
CASC9-204ENST00000523313 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CASC9-204ENST00000523313 SHPRHQ149N8 1683 aa13.6□□□□□ -0.23
CASC9-204ENST00000523313 TET3O43151 1660 aa13.59□□□□□ -0.23
CASC9-204ENST00000523313 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
CASC9-204ENST00000523313 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.23
CASC9-204ENST00000523313 MROH1Q8NDA8 1641 aa13.58□□□□□ -0.24
CASC9-204ENST00000523313 CEP152O94986 1710 aa13.58□□□□□ -0.24
CASC9-204ENST00000523313 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
CASC9-204ENST00000523313 RBM6P78332 1123 aaKnown RBP13.57□□□□□ -0.24
CASC9-204ENST00000523313 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CASC9-204ENST00000523313 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
CASC9-204ENST00000523313 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
CASC9-204ENST00000523313 QTRT2Q9H974 415 aaKnown RBP13.56□□□□□ -0.24
CASC9-204ENST00000523313 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
CASC9-204ENST00000523313 DIP2AQ14689 1571 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms