RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 HSPA5P11021 654 aaKnown RBP9.39□□□□□ -0.91
SHPRH-210ENST00000523276 PKD2Q13563 968 aa9.38□□□□□ -0.91
SHPRH-210ENST00000523276 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
SHPRH-210ENST00000523276 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHPRH-210ENST00000523276 POLA2Q14181 598 aa9.38□□□□□ -0.91
SHPRH-210ENST00000523276 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
SHPRH-210ENST00000523276 NUP155O75694 1391 aa9.37□□□□□ -0.91
SHPRH-210ENST00000523276 NBPF8Q3BBV2 869 aa9.37□□□□□ -0.91
SHPRH-210ENST00000523276 KCNH8Q96L42 1107 aa9.37□□□□□ -0.91
SHPRH-210ENST00000523276 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
SHPRH-210ENST00000523276 PLEKHH2Q8IVE3 1493 aa9.37□□□□□ -0.91
SHPRH-210ENST00000523276 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
SHPRH-210ENST00000523276 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
SHPRH-210ENST00000523276 ANP32CO43423 234 aa9.36□□□□□ -0.91
SHPRH-210ENST00000523276 ZCCHC11Q5TAX3 1644 aaKnown RBP9.36□□□□□ -0.91
SHPRH-210ENST00000523276 WASHC2AQ641Q2 1341 aa9.35□□□□□ -0.91
SHPRH-210ENST00000523276 PLCH2O75038 1416 aa9.34□□□□□ -0.91
SHPRH-210ENST00000523276 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.91
SHPRH-210ENST00000523276 SPATA31E1Q6ZUB1 1445 aa9.33□□□□□ -0.92
SHPRH-210ENST00000523276 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
SHPRH-210ENST00000523276 ARHGEF12Q9NZN5 1544 aa9.32□□□□□ -0.92
SHPRH-210ENST00000523276 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
SHPRH-210ENST00000523276 UHRF1BP1Q6BDS2 1440 aa9.31□□□□□ -0.92
SHPRH-210ENST00000523276 UNC13BO14795 1591 aa9.31□□□□□ -0.92
SHPRH-210ENST00000523276 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
SHPRH-210ENST00000523276 CCDC7Q96M83 1385 aa9.31□□□□□ -0.92
SHPRH-210ENST00000523276 EFCAB2Q5VUJ9 269 aa9.31□□□□□ -0.92
SHPRH-210ENST00000523276 ABCC1P33527 1531 aa9.3□□□□□ -0.92
SHPRH-210ENST00000523276 ARAP3Q8WWN8 1544 aa9.3□□□□□ -0.92
SHPRH-210ENST00000523276 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
SHPRH-210ENST00000523276 DUOX2Q9NRD8 1548 aa9.29□□□□□ -0.92
SHPRH-210ENST00000523276 ERBINQ96RT1 1412 aa9.28□□□□□ -0.92
SHPRH-210ENST00000523276 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
SHPRH-210ENST00000523276 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
SHPRH-210ENST00000523276 MAGI2Q86UL8 1455 aa9.27□□□□□ -0.92
SHPRH-210ENST00000523276 TRAPPC8Q9Y2L5 1435 aa9.27□□□□□ -0.93
SHPRH-210ENST00000523276 KIF7Q2M1P5 1343 aa9.27□□□□□ -0.93
SHPRH-210ENST00000523276 IQGAP3Q86VI3 1631 aa9.27□□□□□ -0.93
SHPRH-210ENST00000523276 USP47Q96K76 1375 aa9.27□□□□□ -0.93
SHPRH-210ENST00000523276 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
SHPRH-210ENST00000523276 PLA2R1Q13018 1463 aa9.25□□□□□ -0.93
SHPRH-210ENST00000523276 KDM5CP41229 1560 aa9.25□□□□□ -0.93
SHPRH-210ENST00000523276 CCDC144AA2RUR9 1427 aa9.25□□□□□ -0.93
SHPRH-210ENST00000523276 RTEL1-TNFRSF6BF6WH68 1400 aa9.25□□□□□ -0.93
SHPRH-210ENST00000523276 ZFYVE16Q7Z3T8 1539 aa9.24□□□□□ -0.93
SHPRH-210ENST00000523276 POLR1AO95602 1720 aaPredicted RBP9.24□□□□□ -0.93
SHPRH-210ENST00000523276 ATP10AO60312 1499 aa9.24□□□□□ -0.93
SHPRH-210ENST00000523276 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
SHPRH-210ENST00000523276 ARID4BQ4LE39 1312 aaPredicted RBP9.23□□□□□ -0.93
SHPRH-210ENST00000523276 ABCA9Q8IUA7 1624 aa9.23□□□□□ -0.93
SHPRH-210ENST00000523276 POTEHQ6S545 545 aa9.23□□□□□ -0.93
SHPRH-210ENST00000523276 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
SHPRH-210ENST00000523276 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
SHPRH-210ENST00000523276 ASXL2Q76L83 1435 aa9.22□□□□□ -0.93
SHPRH-210ENST00000523276 FANCAO15360 1455 aa9.22□□□□□ -0.93
SHPRH-210ENST00000523276 CARD11Q9BXL7 1154 aa9.22□□□□□ -0.93
SHPRH-210ENST00000523276 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-210ENST00000523276 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
SHPRH-210ENST00000523276 OSCARQ8IYS5 282 aa9.21□□□□□ -0.93
SHPRH-210ENST00000523276 AFAP1Q8N556 730 aa9.21□□□□□ -0.93
SHPRH-210ENST00000523276 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.93
SHPRH-210ENST00000523276 PRAG1Q86YV5 1406 aa9.21□□□□□ -0.93
SHPRH-210ENST00000523276 BCORL1Q5H9F3 1711 aa9.21□□□□□ -0.94
SHPRH-210ENST00000523276 A2MP01023 1474 aa9.2□□□□□ -0.94
SHPRH-210ENST00000523276 INO80Q9ULG1 1556 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-210ENST00000523276 PELP1Q8IZL8 1130 aaKnown RBP9.2□□□□□ -0.94
SHPRH-210ENST00000523276 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-210ENST00000523276 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
SHPRH-210ENST00000523276 ATP7AQ04656 1500 aa9.19□□□□□ -0.94
SHPRH-210ENST00000523276 ROCK2O75116 1388 aaKnown RBP9.19□□□□□ -0.94
SHPRH-210ENST00000523276 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
SHPRH-210ENST00000523276 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
SHPRH-210ENST00000523276 SCAPERQ9BY12 1400 aa9.18□□□□□ -0.94
SHPRH-210ENST00000523276 TRPM1Q7Z4N2 1603 aa9.18□□□□□ -0.94
SHPRH-210ENST00000523276 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
SHPRH-210ENST00000523276 RGL3Q3MIN7 710 aa9.17□□□□□ -0.94
SHPRH-210ENST00000523276 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
SHPRH-210ENST00000523276 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
SHPRH-210ENST00000523276 CCDC184Q52MB2 194 aa9.17□□□□□ -0.94
SHPRH-210ENST00000523276 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHPRH-210ENST00000523276 PTPRTO14522 1441 aa9.16□□□□□ -0.94
SHPRH-210ENST00000523276 TRPM2O94759 1503 aa9.16□□□□□ -0.94
SHPRH-210ENST00000523276 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
SHPRH-210ENST00000523276 LAMC1P11047 1609 aa9.16□□□□□ -0.94
SHPRH-210ENST00000523276 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.94
SHPRH-210ENST00000523276 EIF2AK4Q9P2K8 1649 aaKnown RBP9.15□□□□□ -0.94
SHPRH-210ENST00000523276 E9PCH4 1651 aa9.15□□□□□ -0.94
SHPRH-210ENST00000523276 KANK1Q14678 1352 aa9.15□□□□□ -0.94
SHPRH-210ENST00000523276 POLR3GLQ9BT43 218 aa9.15□□□□□ -0.94
SHPRH-210ENST00000523276 MRS2Q9HD23 443 aa9.15□□□□□ -0.94
SHPRH-210ENST00000523276 PRDM15P57071 1507 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-210ENST00000523276 MKRN4PQ13434 485 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-210ENST00000523276 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
SHPRH-210ENST00000523276 TET3O43151 1660 aa9.14□□□□□ -0.95
SHPRH-210ENST00000523276 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-210ENST00000523276 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
SHPRH-210ENST00000523276 CD109Q6YHK3 1445 aa9.13□□□□□ -0.95
SHPRH-210ENST00000523276 MROH1Q8NDA8 1641 aa9.12□□□□□ -0.95
SHPRH-210ENST00000523276 KIF3BO15066 747 aa9.12□□□□□ -0.95
SHPRH-210ENST00000523276 CFAP74Q9C0B2 1584 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms