RNA–Protein interactions for RNA: ENST00000522234.5

CDK16-217, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-217ENST00000522234 MYT1LQ9UL68 1186 aa29.6■■■□□ 2.33
CDK16-217ENST00000522234 MLH3Q9UHC1 1453 aa29.6■■■□□ 2.33
CDK16-217ENST00000522234 HECW2Q9P2P5 1572 aa29.6■■■□□ 2.33
CDK16-217ENST00000522234 DHX29Q7Z478 1369 aaKnown RBP29.6■■■□□ 2.33
CDK16-217ENST00000522234 FAM69CQ0P6D2 419 aa29.54■■■□□ 2.32
CDK16-217ENST00000522234 A2MP01023 1474 aa29.51■■■□□ 2.31
CDK16-217ENST00000522234 RICTORQ6R327 1708 aa29.51■■■□□ 2.31
CDK16-217ENST00000522234 VWDEQ8N2E2 1590 aa29.5■■■□□ 2.31
CDK16-217ENST00000522234 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
CDK16-217ENST00000522234 ATP10AO60312 1499 aa29.48■■■□□ 2.31
CDK16-217ENST00000522234 KANK1Q14678 1352 aa29.48■■■□□ 2.31
CDK16-217ENST00000522234 ABCA6Q8N139 1617 aa29.47■■■□□ 2.31
CDK16-217ENST00000522234 PLA2R1Q13018 1463 aa29.46■■■□□ 2.31
CDK16-217ENST00000522234 TET3O43151 1660 aa29.46■■■□□ 2.31
CDK16-217ENST00000522234 CCDC144AA2RUR9 1427 aa29.46■■■□□ 2.31
CDK16-217ENST00000522234 MROH1Q8NDA8 1641 aa29.46■■■□□ 2.31
CDK16-217ENST00000522234 KIF3BO15066 747 aa29.46■■■□□ 2.31
CDK16-217ENST00000522234 PPRC1Q5VV67 1664 aaKnown RBP29.45■■■□□ 2.31
CDK16-217ENST00000522234 RNF17Q9BXT8 1623 aaKnown RBP29.44■■■□□ 2.3
CDK16-217ENST00000522234 FRMPD1Q5SYB0 1578 aa29.44■■■□□ 2.3
CDK16-217ENST00000522234 RAPGEF3O95398 923 aa29.44■■■□□ 2.3
CDK16-217ENST00000522234 E9PCH4 1651 aa29.43■■■□□ 2.3
CDK16-217ENST00000522234 BCORL1Q5H9F3 1711 aa29.43■■■□□ 2.3
CDK16-217ENST00000522234 TSPOAP1O95153 1857 aa29.4■■■□□ 2.3
CDK16-217ENST00000522234 DIP2CQ9Y2E4 1556 aa29.39■■■□□ 2.3
CDK16-217ENST00000522234 NBPF8Q3BBV2 869 aa29.39■■■□□ 2.3
CDK16-217ENST00000522234 KIF13AQ9H1H9 1805 aa29.38■■■□□ 2.29
CDK16-217ENST00000522234 ZMYM4Q5VZL5 1548 aa29.37■■■□□ 2.29
CDK16-217ENST00000522234 UHRF1BP1Q6BDS2 1440 aa29.36■■■□□ 2.29
CDK16-217ENST00000522234 TRPM2O94759 1503 aa29.34■■■□□ 2.29
CDK16-217ENST00000522234 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
CDK16-217ENST00000522234 SPHKAPQ2M3C7 1700 aa29.34■■■□□ 2.29
CDK16-217ENST00000522234 PTPRTO14522 1441 aa29.33■■■□□ 2.29
CDK16-217ENST00000522234 EFCAB6Q5THR3 1501 aa29.31■■■□□ 2.28
CDK16-217ENST00000522234 EIF4G2P78344 907 aaKnown RBP eCLIP29.3■■■□□ 2.284e-7■■■□□ 16.6
CDK16-217ENST00000522234 HIRIP3Q9BW71 556 aaPredicted RBP29.29■■■□□ 2.28
CDK16-217ENST00000522234 CEP152O94986 1710 aa29.27■■■□□ 2.28
CDK16-217ENST00000522234 HSPA5P11021 654 aaKnown RBP29.26■■■□□ 2.27
CDK16-217ENST00000522234 YEATS2Q9ULM3 1422 aa29.26■■■□□ 2.27
CDK16-217ENST00000522234 RALGAPBQ86X10 1494 aa29.25■■■□□ 2.27
CDK16-217ENST00000522234 MIER1Q8N108 512 aa29.25■■■□□ 2.27
CDK16-217ENST00000522234 DCAF11Q8TEB1 546 aa29.23■■■□□ 2.27
CDK16-217ENST00000522234 ZNF326Q5BKZ1 582 aaKnown RBP29.21■■■□□ 2.27
CDK16-217ENST00000522234 CLTCL1P53675 1640 aa29.21■■■□□ 2.27
CDK16-217ENST00000522234 SPATA31E1Q6ZUB1 1445 aa29.2■■■□□ 2.26
CDK16-217ENST00000522234 ABCC3O15438 1527 aa29.19■■■□□ 2.26
CDK16-217ENST00000522234 GGT6Q6P531 493 aa29.18■■■□□ 2.26
CDK16-217ENST00000522234 KDM2AQ9Y2K7 1162 aa29.18■■■□□ 2.26
CDK16-217ENST00000522234 REREQ9P2R6 1566 aa29.17■■■□□ 2.26
CDK16-217ENST00000522234 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
CDK16-217ENST00000522234 RGL3Q3MIN7 710 aa29.16■■■□□ 2.26
CDK16-217ENST00000522234 NEURL4Q96JN8 1562 aa29.16■■■□□ 2.26
CDK16-217ENST00000522234 ZC3H13Q5T200 1668 aaKnown RBP29.15■■■□□ 2.26
CDK16-217ENST00000522234 DDX10Q13206 875 aaKnown RBP29.15■■■□□ 2.26
CDK16-217ENST00000522234 CAMSAP1Q5T5Y3 1602 aa29.13■■■□□ 2.25
CDK16-217ENST00000522234 TRPM1Q7Z4N2 1603 aa29.12■■■□□ 2.25
CDK16-217ENST00000522234 WASHC2CQ9Y4E1 1318 aa29.12■■■□□ 2.25
CDK16-217ENST00000522234 NPATQ14207 1427 aa29.11■■■□□ 2.25
CDK16-217ENST00000522234 USP47Q96K76 1375 aa29.1■■■□□ 2.25
CDK16-217ENST00000522234 COL17A1Q9UMD9 1497 aaPredicted RBP29.08■■■□□ 2.25
CDK16-217ENST00000522234 AGLP35573 1532 aa29.07■■■□□ 2.24
CDK16-217ENST00000522234 ARHGEF40Q8TER5 1519 aa29.06■■■□□ 2.24
CDK16-217ENST00000522234 KIF1BO60333 1816 aa29.06■■■□□ 2.24
CDK16-217ENST00000522234 CNTLNQ9NXG0 1405 aa29.05■■■□□ 2.24
CDK16-217ENST00000522234 POLR1AO95602 1720 aaPredicted RBP29.05■■■□□ 2.24
CDK16-217ENST00000522234 WASHC2AQ641Q2 1341 aa29.05■■■□□ 2.24
CDK16-217ENST00000522234 UGGT1Q9NYU2 1555 aa29.05■■■□□ 2.24
CDK16-217ENST00000522234 STAC3Q96MF2 364 aa29.05■■■□□ 2.24
CDK16-217ENST00000522234 CARD11Q9BXL7 1154 aa29.05■■■□□ 2.24
CDK16-217ENST00000522234 ROCK2O75116 1388 aaKnown RBP29.04■■■□□ 2.24
CDK16-217ENST00000522234 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
CDK16-217ENST00000522234 LAMC1P11047 1609 aa29.03■■■□□ 2.24
CDK16-217ENST00000522234 GPRASP1Q5JY77 1395 aa29.01■■■□□ 2.23
CDK16-217ENST00000522234 MADDQ8WXG6 1647 aa29.01■■■□□ 2.23
CDK16-217ENST00000522234 CCDC7Q96M83 1385 aa29■■■□□ 2.23
CDK16-217ENST00000522234 NOS1P29475 1434 aa28.99■■■□□ 2.23
CDK16-217ENST00000522234 SIGLEC1Q9BZZ2 1709 aa28.97■■■□□ 2.23
CDK16-217ENST00000522234 ADGRB3O60242 1522 aa28.97■■■□□ 2.23
CDK16-217ENST00000522234 MROH2AA6NES4 1674 aa28.95■■■□□ 2.23
CDK16-217ENST00000522234 C11orf95C9JLR9 678 aaPredicted RBP28.94■■■□□ 2.22
CDK16-217ENST00000522234 PPP6R1Q9UPN7 881 aa28.94■■■□□ 2.22
CDK16-217ENST00000522234 CFAP65Q6ZU64 1925 aaKnown RBP28.94■■■□□ 2.22
CDK16-217ENST00000522234 MYOM2P54296 1465 aa28.93■■■□□ 2.22
CDK16-217ENST00000522234 IFT172Q9UG01 1749 aa28.93■■■□□ 2.22
CDK16-217ENST00000522234 PIK3C2BO00750 1634 aa28.92■■■□□ 2.22
CDK16-217ENST00000522234 SYNMO15061 1565 aa28.92■■■□□ 2.22
CDK16-217ENST00000522234 KIF7Q2M1P5 1343 aa28.9■■■□□ 2.22
CDK16-217ENST00000522234 NBPF1Q3BBV0 1214 aa28.89■■■□□ 2.22
CDK16-217ENST00000522234 ARID4BQ4LE39 1312 aaPredicted RBP28.89■■■□□ 2.22
CDK16-217ENST00000522234 KIAA1210Q9ULL0 1709 aa28.88■■■□□ 2.21
CDK16-217ENST00000522234 PREX1Q8TCU6 1659 aa28.87■■■□□ 2.21
CDK16-217ENST00000522234 ANP32CO43423 234 aa28.85■■■□□ 2.21
CDK16-217ENST00000522234 ST20-MTHFSA0A0A6YYL1 179 aa28.84■■■□□ 2.21
CDK16-217ENST00000522234 CLTCQ00610 1675 aaKnown RBP28.83■■■□□ 2.21
CDK16-217ENST00000522234 NRXN1Q9ULB1 1477 aa28.82■■■□□ 2.2
CDK16-217ENST00000522234 PPLO60437 1756 aa28.81■■■□□ 2.2
CDK16-217ENST00000522234 CHGAP10645 457 aaKnown RBP28.8■■■□□ 2.2
CDK16-217ENST00000522234 SLC52A1Q9NWF4 448 aa28.8■■■□□ 2.2
CDK16-217ENST00000522234 RPGRIP1LQ68CZ1 1315 aa28.79■■■□□ 2.2
CDK16-217ENST00000522234 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms