RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 EIF2AK4Q9P2K8 1649 aaKnown RBP10.47□□□□□ -0.73
SPIDR-218ENST00000522222 KIF15Q9NS87 1388 aa10.46□□□□□ -0.74
SPIDR-218ENST00000522222 DUOX2Q9NRD8 1548 aa10.46□□□□□ -0.74
SPIDR-218ENST00000522222 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.74
SPIDR-218ENST00000522222 MROH1Q8NDA8 1641 aa10.45□□□□□ -0.74
SPIDR-218ENST00000522222 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
SPIDR-218ENST00000522222 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
SPIDR-218ENST00000522222 PREX1Q8TCU6 1659 aa10.44□□□□□ -0.74
SPIDR-218ENST00000522222 ADGRL2O95490 1459 aa10.44□□□□□ -0.74
SPIDR-218ENST00000522222 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
SPIDR-218ENST00000522222 FAM50AQ14320 339 aaKnown RBP10.44□□□□□ -0.74
SPIDR-218ENST00000522222 ERBINQ96RT1 1412 aa10.43□□□□□ -0.74
SPIDR-218ENST00000522222 KIF3BO15066 747 aa10.43□□□□□ -0.74
SPIDR-218ENST00000522222 GGT6Q6P531 493 aa10.43□□□□□ -0.74
SPIDR-218ENST00000522222 ESF1Q9H501 851 aaKnown RBP10.43□□□□□ -0.74
SPIDR-218ENST00000522222 ABCC3O15438 1527 aa10.42□□□□□ -0.74
SPIDR-218ENST00000522222 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
SPIDR-218ENST00000522222 NPATQ14207 1427 aa10.41□□□□□ -0.74
SPIDR-218ENST00000522222 ANKRD30AQ9BXX3 1397 aa10.41□□□□□ -0.74
SPIDR-218ENST00000522222 ZC3H13Q5T200 1668 aaKnown RBP10.41□□□□□ -0.74
SPIDR-218ENST00000522222 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
SPIDR-218ENST00000522222 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
SPIDR-218ENST00000522222 UHRF1BP1Q6BDS2 1440 aa10.41□□□□□ -0.74
SPIDR-218ENST00000522222 DEPDC5O75140 1603 aa10.4□□□□□ -0.74
SPIDR-218ENST00000522222 ZMYM3Q14202 1370 aa10.4□□□□□ -0.74
SPIDR-218ENST00000522222 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.74
SPIDR-218ENST00000522222 RRP7BPQ9NSQ0 103 aa10.4□□□□□ -0.74
SPIDR-218ENST00000522222 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
SPIDR-218ENST00000522222 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.75
SPIDR-218ENST00000522222 CEP152O94986 1710 aa10.39□□□□□ -0.75
SPIDR-218ENST00000522222 PZPP20742 1482 aa10.39□□□□□ -0.75
SPIDR-218ENST00000522222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPIDR-218ENST00000522222 ZNF142P52746 1687 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-218ENST00000522222 CAMSAP1Q5T5Y3 1602 aa10.38□□□□□ -0.75
SPIDR-218ENST00000522222 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-218ENST00000522222 PCGF6Q9BYE7 350 aa10.38□□□□□ -0.75
SPIDR-218ENST00000522222 HSPA2P54652 639 aa10.37□□□□□ -0.75
SPIDR-218ENST00000522222 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
SPIDR-218ENST00000522222 VWDEQ8N2E2 1590 aa10.36□□□□□ -0.75
SPIDR-218ENST00000522222 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-218ENST00000522222 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-218ENST00000522222 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
SPIDR-218ENST00000522222 WASHC2CQ9Y4E1 1318 aa10.35□□□□□ -0.75
SPIDR-218ENST00000522222 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
SPIDR-218ENST00000522222 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
SPIDR-218ENST00000522222 UNC13BO14795 1591 aa10.35□□□□□ -0.75
SPIDR-218ENST00000522222 TNRQ92752 1358 aa10.34□□□□□ -0.75
SPIDR-218ENST00000522222 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
SPIDR-218ENST00000522222 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
SPIDR-218ENST00000522222 LMTK2Q8IWU2 1503 aa10.33□□□□□ -0.76
SPIDR-218ENST00000522222 ITGAEP38570 1179 aa10.33□□□□□ -0.76
SPIDR-218ENST00000522222 EFCAB6Q5THR3 1501 aa10.33□□□□□ -0.76
SPIDR-218ENST00000522222 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
SPIDR-218ENST00000522222 KANK1Q14678 1352 aa10.32□□□□□ -0.76
SPIDR-218ENST00000522222 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-218ENST00000522222 FBXO31Q5XUX0 539 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-218ENST00000522222 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
SPIDR-218ENST00000522222 GCC2Q8IWJ2 1684 aa10.31□□□□□ -0.76
SPIDR-218ENST00000522222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.764e-6■■■□□ 16.3
SPIDR-218ENST00000522222 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
SPIDR-218ENST00000522222 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
SPIDR-218ENST00000522222 TET3O43151 1660 aa10.29□□□□□ -0.76
SPIDR-218ENST00000522222 PLA2R1Q13018 1463 aa10.29□□□□□ -0.76
SPIDR-218ENST00000522222 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
SPIDR-218ENST00000522222 SYNMO15061 1565 aa10.27□□□□□ -0.76
SPIDR-218ENST00000522222 NAIPQ13075 1403 aa10.27□□□□□ -0.77
SPIDR-218ENST00000522222 UGGT1Q9NYU2 1555 aa10.26□□□□□ -0.77
SPIDR-218ENST00000522222 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
SPIDR-218ENST00000522222 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
SPIDR-218ENST00000522222 RPRD2Q5VT52 1461 aaKnown RBP10.25□□□□□ -0.77
SPIDR-218ENST00000522222 POLR1AO95602 1720 aaPredicted RBP10.25□□□□□ -0.77
SPIDR-218ENST00000522222 NEURL4Q96JN8 1562 aa10.25□□□□□ -0.77
SPIDR-218ENST00000522222 E9PCH4 1651 aa10.25□□□□□ -0.77
SPIDR-218ENST00000522222 PTPRTO14522 1441 aa10.24□□□□□ -0.77
SPIDR-218ENST00000522222 NOS1P29475 1434 aa10.24□□□□□ -0.77
SPIDR-218ENST00000522222 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
SPIDR-218ENST00000522222 PIK3C2BO00750 1634 aa10.24□□□□□ -0.77
SPIDR-218ENST00000522222 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
SPIDR-218ENST00000522222 NUP155O75694 1391 aa10.23□□□□□ -0.77
SPIDR-218ENST00000522222 ADGRB3O60242 1522 aa10.23□□□□□ -0.77
SPIDR-218ENST00000522222 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
SPIDR-218ENST00000522222 KCNA4P22459 653 aa10.21□□□□□ -0.77
SPIDR-218ENST00000522222 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
SPIDR-218ENST00000522222 SLIT1O75093 1534 aa10.2□□□□□ -0.78
SPIDR-218ENST00000522222 PKD2Q13563 968 aa10.2□□□□□ -0.78
SPIDR-218ENST00000522222 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
SPIDR-218ENST00000522222 SPHKAPQ2M3C7 1700 aa10.19□□□□□ -0.78
SPIDR-218ENST00000522222 IQGAP1P46940 1657 aa10.18□□□□□ -0.78
SPIDR-218ENST00000522222 MED14O60244 1454 aa10.18□□□□□ -0.78
SPIDR-218ENST00000522222 SCAF11Q99590 1463 aaKnown RBP10.18□□□□□ -0.78
SPIDR-218ENST00000522222 THEMISQ8N1K5 641 aaPredicted RBP10.18□□□□□ -0.78
SPIDR-218ENST00000522222 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
SPIDR-218ENST00000522222 NPHP4O75161 1426 aaPredicted RBP10.17□□□□□ -0.78
SPIDR-218ENST00000522222 IDI1Q13907 227 aa10.17□□□□□ -0.78
SPIDR-218ENST00000522222 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
SPIDR-218ENST00000522222 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
SPIDR-218ENST00000522222 TMEM131LA2VDJ0 1609 aa10.16□□□□□ -0.78
SPIDR-218ENST00000522222 TRPM2O94759 1503 aa10.16□□□□□ -0.78
SPIDR-218ENST00000522222 ANKLE2Q86XL3 938 aa10.15□□□□□ -0.78
SPIDR-218ENST00000522222 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms