RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 PZPP20742 1482 aa31.6■■■□□ 2.65
PTP4A3-203ENST00000520105 EIF2AK4Q9P2K8 1649 aaKnown RBP31.6■■■□□ 2.65
PTP4A3-203ENST00000520105 UNC13BO14795 1591 aa31.59■■■□□ 2.65
PTP4A3-203ENST00000520105 ARHGEF40Q8TER5 1519 aa31.57■■■□□ 2.64
PTP4A3-203ENST00000520105 KDM5DQ9BY66 1539 aa31.55■■■□□ 2.64
PTP4A3-203ENST00000520105 FOXD1Q16676 465 aa31.54■■■□□ 2.64
PTP4A3-203ENST00000520105 GGT6Q6P531 493 aa31.54■■■□□ 2.64
PTP4A3-203ENST00000520105 DEPDC5O75140 1603 aa31.53■■■□□ 2.64
PTP4A3-203ENST00000520105 FAM135AQ9P2D6 1515 aa31.51■■■□□ 2.64
PTP4A3-203ENST00000520105 PKD2Q13563 968 aa31.5■■■□□ 2.63
PTP4A3-203ENST00000520105 REREQ9P2R6 1566 aa31.49■■■□□ 2.63
PTP4A3-203ENST00000520105 MROH1Q8NDA8 1641 aa31.49■■■□□ 2.63
PTP4A3-203ENST00000520105 BCORL1Q5H9F3 1711 aa31.49■■■□□ 2.63
PTP4A3-203ENST00000520105 CLSPNQ9HAW4 1339 aa31.49■■■□□ 2.63
PTP4A3-203ENST00000520105 SIGLEC1Q9BZZ2 1709 aa31.48■■■□□ 2.63
PTP4A3-203ENST00000520105 IQGAP3Q86VI3 1631 aa31.47■■■□□ 2.63
PTP4A3-203ENST00000520105 RNF17Q9BXT8 1623 aaKnown RBP31.47■■■□□ 2.63
PTP4A3-203ENST00000520105 KANK1Q14678 1352 aa31.46■■■□□ 2.63
PTP4A3-203ENST00000520105 PRDM15P57071 1507 aaPredicted RBP31.45■■■□□ 2.63
PTP4A3-203ENST00000520105 AGLP35573 1532 aa31.43■■■□□ 2.62
PTP4A3-203ENST00000520105 VWDEQ8N2E2 1590 aa31.42■■■□□ 2.62
PTP4A3-203ENST00000520105 SIN3AQ96ST3 1273 aa31.41■■■□□ 2.62
PTP4A3-203ENST00000520105 ARID4BQ4LE39 1312 aaPredicted RBP31.39■■■□□ 2.62
PTP4A3-203ENST00000520105 MLECQ14165 292 aa31.38■■■□□ 2.61
PTP4A3-203ENST00000520105 WASHC2CQ9Y4E1 1318 aa31.37■■■□□ 2.61
PTP4A3-203ENST00000520105 ANKRD30BQ9BXX2 1392 aa31.35■■■□□ 2.61
PTP4A3-203ENST00000520105 NEUROD1Q13562 356 aa31.35■■■□□ 2.61
PTP4A3-203ENST00000520105 CEP152O94986 1710 aa31.33■■■□□ 2.61
PTP4A3-203ENST00000520105 ZEB1P37275 1124 aaPredicted RBP31.33■■■□□ 2.61
PTP4A3-203ENST00000520105 TET3O43151 1660 aa31.31■■■□□ 2.6
PTP4A3-203ENST00000520105 ABCC3O15438 1527 aa31.3■■■□□ 2.6
PTP4A3-203ENST00000520105 LMTK2Q8IWU2 1503 aa31.29■■■□□ 2.6
PTP4A3-203ENST00000520105 E9PCH4 1651 aa31.28■■■□□ 2.6
PTP4A3-203ENST00000520105 PPP6R1Q9UPN7 881 aa31.25■■■□□ 2.59
PTP4A3-203ENST00000520105 EFCAB6Q5THR3 1501 aa31.23■■■□□ 2.59
PTP4A3-203ENST00000520105 PLA2R1Q13018 1463 aa31.22■■■□□ 2.59
PTP4A3-203ENST00000520105 ZC3H13Q5T200 1668 aaKnown RBP31.2■■■□□ 2.59
PTP4A3-203ENST00000520105 CAMSAP1Q5T5Y3 1602 aa31.19■■■□□ 2.58
PTP4A3-203ENST00000520105 NPATQ14207 1427 aa31.19■■■□□ 2.58
PTP4A3-203ENST00000520105 CFAP65Q6ZU64 1925 aaKnown RBP31.19■■■□□ 2.58
PTP4A3-203ENST00000520105 ESF1Q9H501 851 aaKnown RBP31.16■■■□□ 2.58
PTP4A3-203ENST00000520105 CLTCQ00610 1675 aaKnown RBP31.16■■■□□ 2.58
PTP4A3-203ENST00000520105 PTPRTO14522 1441 aa31.13■■■□□ 2.57
PTP4A3-203ENST00000520105 RPRD2Q5VT52 1461 aaKnown RBP31.13■■■□□ 2.57
PTP4A3-203ENST00000520105 ARHGAP31Q2M1Z3 1444 aa31.12■■■□□ 2.57
PTP4A3-203ENST00000520105 SPHKAPQ2M3C7 1700 aa31.11■■■□□ 2.57
PTP4A3-203ENST00000520105 CCDC144AA2RUR9 1427 aa31.11■■■□□ 2.57
PTP4A3-203ENST00000520105 TONSLQ96HA7 1378 aa31.08■■■□□ 2.57
PTP4A3-203ENST00000520105 TRPM2O94759 1503 aa31.07■■■□□ 2.56
PTP4A3-203ENST00000520105 FBXO31Q5XUX0 539 aaPredicted RBP31.07■■■□□ 2.56
PTP4A3-203ENST00000520105 ZMYM3Q14202 1370 aa31.06■■■□□ 2.56
PTP4A3-203ENST00000520105 TIMELESSQ9UNS1 1208 aa31.06■■■□□ 2.56
PTP4A3-203ENST00000520105 NOS1P29475 1434 aa31.02■■■□□ 2.56
PTP4A3-203ENST00000520105 CNTLNQ9NXG0 1405 aa31.02■■■□□ 2.56
PTP4A3-203ENST00000520105 L3MBTL2Q969R5 705 aa31.01■■■□□ 2.56
PTP4A3-203ENST00000520105 UGGT1Q9NYU2 1555 aa31.01■■■□□ 2.55
PTP4A3-203ENST00000520105 CLTCL1P53675 1640 aa30.99■■■□□ 2.55
PTP4A3-203ENST00000520105 FER1L4A9Z1Z3 1794 aa30.99■■■□□ 2.55
PTP4A3-203ENST00000520105 PREX1Q8TCU6 1659 aa30.98■■■□□ 2.55
PTP4A3-203ENST00000520105 RGL3Q3MIN7 710 aa30.96■■■□□ 2.55
PTP4A3-203ENST00000520105 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
PTP4A3-203ENST00000520105 ERVK-7P63135 1459 aa30.95■■■□□ 2.55
PTP4A3-203ENST00000520105 SYNMO15061 1565 aa30.95■■■□□ 2.55
PTP4A3-203ENST00000520105 PPP1R15AO75807 674 aaPredicted RBP30.94■■■□□ 2.54
PTP4A3-203ENST00000520105 MROH2AA6NES4 1674 aa30.94■■■□□ 2.54
PTP4A3-203ENST00000520105 MADDQ8WXG6 1647 aa30.92■■■□□ 2.54
PTP4A3-203ENST00000520105 PLPPR3Q6T4P5 718 aa30.91■■■□□ 2.54
PTP4A3-203ENST00000520105 ADAMTSL3P82987 1691 aa30.91■■■□□ 2.54
PTP4A3-203ENST00000520105 IDI1Q13907 227 aa30.91■■■□□ 2.54
PTP4A3-203ENST00000520105 SPATA31E1Q6ZUB1 1445 aa30.89■■■□□ 2.54
PTP4A3-203ENST00000520105 SPATA31D1Q6ZQQ2 1576 aa30.89■■■□□ 2.54
PTP4A3-203ENST00000520105 SLC52A1Q9NWF4 448 aa30.89■■■□□ 2.53
PTP4A3-203ENST00000520105 CHGAP10645 457 aaKnown RBP30.87■■■□□ 2.53
PTP4A3-203ENST00000520105 C3P01024 1663 aa30.87■■■□□ 2.53
PTP4A3-203ENST00000520105 RIMS1Q86UR5 1692 aaKnown RBP30.86■■■□□ 2.53
PTP4A3-203ENST00000520105 PIK3C2BO00750 1634 aa30.86■■■□□ 2.53
PTP4A3-203ENST00000520105 DCAF11Q8TEB1 546 aa30.85■■■□□ 2.53
PTP4A3-203ENST00000520105 KIF1BO60333 1816 aa30.85■■■□□ 2.53
PTP4A3-203ENST00000520105 KDM2AQ9Y2K7 1162 aa30.84■■■□□ 2.53
PTP4A3-203ENST00000520105 TNRQ92752 1358 aa30.8■■■□□ 2.52
PTP4A3-203ENST00000520105 ZNF326Q5BKZ1 582 aaKnown RBP30.77■■■□□ 2.52
PTP4A3-203ENST00000520105 NBPF8Q3BBV2 869 aa30.76■■■□□ 2.52
PTP4A3-203ENST00000520105 ADGRB3O60242 1522 aa30.76■■■□□ 2.52
PTP4A3-203ENST00000520105 NEURL4Q96JN8 1562 aa30.76■■■□□ 2.51
PTP4A3-203ENST00000520105 STAG3Q9UJ98 1225 aa30.73■■■□□ 2.51
PTP4A3-203ENST00000520105 TMEM131LA2VDJ0 1609 aa30.71■■■□□ 2.51
PTP4A3-203ENST00000520105 MYO5BQ9ULV0 1848 aa30.7■■■□□ 2.5
PTP4A3-203ENST00000520105 PTPRMP28827 1452 aa30.67■■■□□ 2.5
PTP4A3-203ENST00000520105 UHRF1BP1Q6BDS2 1440 aa30.66■■■□□ 2.5
PTP4A3-203ENST00000520105 RPGRIP1LQ68CZ1 1315 aa30.64■■■□□ 2.49
PTP4A3-203ENST00000520105 A2ML1A8K2U0 1454 aa30.64■■■□□ 2.49
PTP4A3-203ENST00000520105 KDM4FA0A1W2PPD8 638 aa30.63■■■□□ 2.49
PTP4A3-203ENST00000520105 NUTM2DQ5VT03 806 aaPredicted RBP30.63■■■□□ 2.49
PTP4A3-203ENST00000520105 NLRP1Q9C000 1473 aa30.63■■■□□ 2.49
PTP4A3-203ENST00000520105 PRAG1Q86YV5 1406 aa30.62■■■□□ 2.49
PTP4A3-203ENST00000520105 STAC3Q96MF2 364 aa30.62■■■□□ 2.49
PTP4A3-203ENST00000520105 IFT172Q9UG01 1749 aa30.61■■■□□ 2.49
PTP4A3-203ENST00000520105 ADGRF5Q8IZF2 1346 aa30.61■■■□□ 2.49
PTP4A3-203ENST00000520105 PPLO60437 1756 aa30.59■■■□□ 2.49
PTP4A3-203ENST00000520105 NEXMIFQ5QGS0 1516 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms