RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ROCK1Q13464 1354 aa14.72□□□□□ -0.05
PCDHGB4-201ENST00000519479 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
PCDHGB4-201ENST00000519479 C9orf84Q5VXU9 1444 aa14.7□□□□□ -0.06
PCDHGB4-201ENST00000519479 POGKQ9P215 609 aa14.7□□□□□ -0.06
PCDHGB4-201ENST00000519479 ABCC5O15440 1437 aa14.7□□□□□ -0.06
PCDHGB4-201ENST00000519479 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
PCDHGB4-201ENST00000519479 SAFB2Q14151 953 aaKnown RBP eCLIP14.7□□□□□ -0.06
PCDHGB4-201ENST00000519479 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
PCDHGB4-201ENST00000519479 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
PCDHGB4-201ENST00000519479 ANKRD30BQ9BXX2 1392 aa14.68□□□□□ -0.06
PCDHGB4-201ENST00000519479 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
PCDHGB4-201ENST00000519479 PPM1GO15355 546 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB4-201ENST00000519479 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
PCDHGB4-201ENST00000519479 ATP10BO94823 1461 aa14.68□□□□□ -0.06
PCDHGB4-201ENST00000519479 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB4-201ENST00000519479 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
PCDHGB4-201ENST00000519479 NOP58Q9Y2X3 529 aaKnown RBP14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 RGS3P49796 1198 aa14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 PDE3BQ13370 1112 aa14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 AFAP1Q8N556 730 aa14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
PCDHGB4-201ENST00000519479 ABCC2Q92887 1545 aa14.65□□□□□ -0.06
PCDHGB4-201ENST00000519479 SRPK2P78362 688 aaKnown RBP14.64□□□□□ -0.07
PCDHGB4-201ENST00000519479 STK26Q9P289 416 aa14.64□□□□□ -0.07
PCDHGB4-201ENST00000519479 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
PCDHGB4-201ENST00000519479 U2SURPO15042 1029 aaKnown RBP14.64□□□□□ -0.07
PCDHGB4-201ENST00000519479 DDRGK1Q96HY6 314 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
PCDHGB4-201ENST00000519479 AKNAQ7Z591 1439 aa14.62□□□□□ -0.07
PCDHGB4-201ENST00000519479 ASXL2Q76L83 1435 aa14.62□□□□□ -0.07
PCDHGB4-201ENST00000519479 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 NCOA1Q15788 1441 aa14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 NUTM2DQ5VT03 806 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 FTSJ3Q8IY81 847 aaKnown RBP14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 TRAK1Q9UPV9 953 aa14.61□□□□□ -0.07
PCDHGB4-201ENST00000519479 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
PCDHGB4-201ENST00000519479 STAC3Q96MF2 364 aa14.59□□□□□ -0.07
PCDHGB4-201ENST00000519479 ADGRL1O94910 1474 aa14.58□□□□□ -0.07
PCDHGB4-201ENST00000519479 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.08
PCDHGB4-201ENST00000519479 CHD1O14646 1710 aa14.58□□□□□ -0.08
PCDHGB4-201ENST00000519479 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.08
PCDHGB4-201ENST00000519479 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
PCDHGB4-201ENST00000519479 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
PCDHGB4-201ENST00000519479 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
PCDHGB4-201ENST00000519479 LAS1LQ9Y4W2 734 aaKnown RBP14.57□□□□□ -0.08
PCDHGB4-201ENST00000519479 PLCH2O75038 1416 aa14.57□□□□□ -0.08
PCDHGB4-201ENST00000519479 HSP90AA1P07900 732 aaKnown RBP14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 FANCAO15360 1455 aa14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 PLIN1O60240 522 aa14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCDHGB4-201ENST00000519479 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB4-201ENST00000519479 GPATCH8Q9UKJ3 1502 aaKnown RBP14.55□□□□□ -0.08
PCDHGB4-201ENST00000519479 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
PCDHGB4-201ENST00000519479 DENND4BO75064 1496 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB4-201ENST00000519479 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
PCDHGB4-201ENST00000519479 PNISRQ8TF01 805 aaKnown RBP14.54□□□□□ -0.08
PCDHGB4-201ENST00000519479 RAPGEF3O95398 923 aa14.53□□□□□ -0.08
PCDHGB4-201ENST00000519479 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
PCDHGB4-201ENST00000519479 TCOF1Q13428 1488 aaKnown RBP14.51□□□□□ -0.09
PCDHGB4-201ENST00000519479 BECN1Q14457 450 aa14.51□□□□□ -0.09
PCDHGB4-201ENST00000519479 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB4-201ENST00000519479 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB4-201ENST00000519479 APAF1O14727 1248 aa14.49□□□□□ -0.09
PCDHGB4-201ENST00000519479 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
PCDHGB4-201ENST00000519479 MS4A1P11836 297 aa14.48□□□□□ -0.09
PCDHGB4-201ENST00000519479 CFAP70Q5T0N1 1121 aa14.48□□□□□ -0.09
PCDHGB4-201ENST00000519479 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.48□□□□□ -0.09
PCDHGB4-201ENST00000519479 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
PCDHGB4-201ENST00000519479 RRP7AQ9Y3A4 280 aaKnown RBP14.48□□□□□ -0.09
PCDHGB4-201ENST00000519479 CDCA7LQ96GN5 454 aa14.47□□□□□ -0.09
PCDHGB4-201ENST00000519479 IPO9Q96P70 1041 aaKnown RBP14.47□□□□□ -0.09
PCDHGB4-201ENST00000519479 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
PCDHGB4-201ENST00000519479 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
PCDHGB4-201ENST00000519479 FANCIQ9NVI1 1328 aa14.47□□□□□ -0.09
PCDHGB4-201ENST00000519479 ABCA8O94911 1581 aa14.46□□□□□ -0.09
PCDHGB4-201ENST00000519479 TERF2IPQ9NYB0 399 aa14.45□□□□□ -0.1
PCDHGB4-201ENST00000519479 CENPJQ9HC77 1338 aaPredicted RBP14.45□□□□□ -0.1
PCDHGB4-201ENST00000519479 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 PLEKHG5O94827 1062 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 CLUAP1Q96AJ1 413 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 ARXQ96QS3 562 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 SLC52A1Q9NWF4 448 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
PCDHGB4-201ENST00000519479 E9PSI1 815 aa14.42□□□□□ -0.1
PCDHGB4-201ENST00000519479 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms