RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 PTPRMP28827 1452 aa34.32■■■■□ 3.08
SKP1-206ENST00000519321 CNTLNQ9NXG0 1405 aa34.3■■■■□ 3.08
SKP1-206ENST00000519321 FAM135AQ9P2D6 1515 aa34.25■■■■□ 3.07
SKP1-206ENST00000519321 RNF17Q9BXT8 1623 aaKnown RBP34.24■■■■□ 3.07
SKP1-206ENST00000519321 ANKRD50Q9ULJ7 1429 aa34.21■■■■□ 3.07
SKP1-206ENST00000519321 MROH2AA6NES4 1674 aa34.19■■■■□ 3.06
SKP1-206ENST00000519321 CLTCQ00610 1675 aaKnown RBP34.15■■■■□ 3.06
SKP1-206ENST00000519321 KDM5DQ9BY66 1539 aa34.15■■■■□ 3.06
SKP1-206ENST00000519321 WASHC2CQ9Y4E1 1318 aa34.14■■■■□ 3.06
SKP1-206ENST00000519321 DEPDC5O75140 1603 aa34.12■■■■□ 3.05
SKP1-206ENST00000519321 ZMYM3Q14202 1370 aa34.11■■■■□ 3.05
SKP1-206ENST00000519321 PRDM15P57071 1507 aaPredicted RBP34.11■■■■□ 3.05
SKP1-206ENST00000519321 MROH1Q8NDA8 1641 aa34.11■■■■□ 3.05
SKP1-206ENST00000519321 C3P01024 1663 aa34.1■■■■□ 3.05
SKP1-206ENST00000519321 ZC3H13Q5T200 1668 aaKnown RBP34.1■■■■□ 3.05
SKP1-206ENST00000519321 KANK1Q14678 1352 aa34.1■■■■□ 3.05
SKP1-206ENST00000519321 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
SKP1-206ENST00000519321 CEBPAP49715 358 aaPredicted RBP34.07■■■■□ 3.04
SKP1-206ENST00000519321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.05■■■■□ 3.041e-7■■■□□ 17.9
SKP1-206ENST00000519321 ABCC3O15438 1527 aa34.04■■■■□ 3.04
SKP1-206ENST00000519321 HFM1A2PYH4 1435 aa34.03■■■■□ 3.04
SKP1-206ENST00000519321 GCC2Q8IWJ2 1684 aa34.03■■■■□ 3.04
SKP1-206ENST00000519321 NAIPQ13075 1403 aa34.02■■■■□ 3.04
SKP1-206ENST00000519321 NPATQ14207 1427 aa34■■■■□ 3.03
SKP1-206ENST00000519321 UNC13BO14795 1591 aa33.98■■■■□ 3.03
SKP1-206ENST00000519321 VWDEQ8N2E2 1590 aa33.98■■■■□ 3.03
SKP1-206ENST00000519321 CEP152O94986 1710 aa33.97■■■■□ 3.03
SKP1-206ENST00000519321 SETD1BQ9UPS6 1966 aaKnown RBP33.96■■■■□ 3.03
SKP1-206ENST00000519321 PZPP20742 1482 aa33.95■■■■□ 3.03
SKP1-206ENST00000519321 LMTK2Q8IWU2 1503 aa33.94■■■■□ 3.02
SKP1-206ENST00000519321 CAMSAP1Q5T5Y3 1602 aa33.94■■■■□ 3.02
SKP1-206ENST00000519321 ARHGAP31Q2M1Z3 1444 aa33.9■■■■□ 3.02
SKP1-206ENST00000519321 PREX1Q8TCU6 1659 aa33.9■■■■□ 3.02
SKP1-206ENST00000519321 NUP155O75694 1391 aa33.86■■■■□ 3.01
SKP1-206ENST00000519321 UHRF1BP1Q6BDS2 1440 aa33.86■■■■□ 3.01
SKP1-206ENST00000519321 IQGAP3Q86VI3 1631 aa33.85■■■■□ 3.01
SKP1-206ENST00000519321 ACIN1Q9UKV3 1341 aaKnown RBP33.82■■■■□ 3.01
SKP1-206ENST00000519321 FBXO31Q5XUX0 539 aaPredicted RBP33.82■■■■□ 3
SKP1-206ENST00000519321 TET3O43151 1660 aa33.82■■■■□ 3
SKP1-206ENST00000519321 EFCAB6Q5THR3 1501 aa33.82■■■■□ 3
SKP1-206ENST00000519321 LMTK3Q96Q04 1460 aa33.82■■■■□ 3
SKP1-206ENST00000519321 TNRQ92752 1358 aa33.8■■■■□ 3
SKP1-206ENST00000519321 SPATA31D1Q6ZQQ2 1576 aa33.79■■■■□ 3
SKP1-206ENST00000519321 SETD5Q9C0A6 1442 aa33.79■■■■□ 3
SKP1-206ENST00000519321 ERVK-7P63135 1459 aa33.78■■■■□ 3
SKP1-206ENST00000519321 RPRD2Q5VT52 1461 aaKnown RBP33.77■■■■□ 3
SKP1-206ENST00000519321 MYO3AQ8NEV4 1616 aa33.75■■■□□ 2.99
SKP1-206ENST00000519321 TRIM52Q96A61 297 aa33.74■■■□□ 2.99
SKP1-206ENST00000519321 NLRP1Q9C000 1473 aa33.71■■■□□ 2.99
SKP1-206ENST00000519321 CFAP65Q6ZU64 1925 aaKnown RBP33.71■■■□□ 2.99
SKP1-206ENST00000519321 ZNF142P52746 1687 aaPredicted RBP33.7■■■□□ 2.99
SKP1-206ENST00000519321 CEP170BQ9Y4F5 1589 aaPredicted RBP33.68■■■□□ 2.98
SKP1-206ENST00000519321 A2ML1A8K2U0 1454 aa33.67■■■□□ 2.98
SKP1-206ENST00000519321 E9PCH4 1651 aa33.66■■■□□ 2.98
SKP1-206ENST00000519321 NOS1P29475 1434 aa33.65■■■□□ 2.98
SKP1-206ENST00000519321 RAB3GAP2Q9H2M9 1393 aa33.64■■■□□ 2.98
SKP1-206ENST00000519321 HSPA2P54652 639 aa33.63■■■□□ 2.97
SKP1-206ENST00000519321 TRIM26Q12899 539 aaPredicted RBP33.62■■■□□ 2.97
SKP1-206ENST00000519321 HRCP23327 699 aa33.61■■■□□ 2.97
SKP1-206ENST00000519321 SLC4A1APQ9BWU0 796 aaKnown RBP33.6■■■□□ 2.97
SKP1-206ENST00000519321 SLC52A1Q9NWF4 448 aa33.58■■■□□ 2.97
SKP1-206ENST00000519321 SYNMO15061 1565 aa33.57■■■□□ 2.96
SKP1-206ENST00000519321 UGGT1Q9NYU2 1555 aa33.55■■■□□ 2.96
SKP1-206ENST00000519321 THEMISQ8N1K5 641 aaPredicted RBP33.55■■■□□ 2.96
SKP1-206ENST00000519321 PKD2Q13563 968 aa33.53■■■□□ 2.96
SKP1-206ENST00000519321 PLA2R1Q13018 1463 aa33.5■■■□□ 2.95
SKP1-206ENST00000519321 IDI1Q13907 227 aa33.5■■■□□ 2.95
SKP1-206ENST00000519321 MPHOSPH9Q99550 1183 aa33.5■■■□□ 2.95
SKP1-206ENST00000519321 SPHKAPQ2M3C7 1700 aa33.48■■■□□ 2.95
SKP1-206ENST00000519321 PTPRTO14522 1441 aa33.48■■■□□ 2.95
SKP1-206ENST00000519321 STAG3Q9UJ98 1225 aa33.48■■■□□ 2.95
SKP1-206ENST00000519321 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
SKP1-206ENST00000519321 KDM5AP29375 1690 aaKnown RBP33.47■■■□□ 2.95
SKP1-206ENST00000519321 UBR1Q8IWV7 1749 aa33.46■■■□□ 2.95
SKP1-206ENST00000519321 DMRT2Q9Y5R5 561 aa33.42■■■□□ 2.94
SKP1-206ENST00000519321 ADGRB3O60242 1522 aa33.41■■■□□ 2.94
SKP1-206ENST00000519321 TRPM2O94759 1503 aa33.41■■■□□ 2.94
SKP1-206ENST00000519321 STRCQ7RTU9 1775 aa33.4■■■□□ 2.94
SKP1-206ENST00000519321 ANKLE2Q86XL3 938 aa33.37■■■□□ 2.93
SKP1-206ENST00000519321 SLIT1O75093 1534 aa33.34■■■□□ 2.93
SKP1-206ENST00000519321 NCKAP5LQ9HCH0 1330 aa33.32■■■□□ 2.93
SKP1-206ENST00000519321 ARHGAP23Q9P227 1491 aa33.32■■■□□ 2.92
SKP1-206ENST00000519321 TMEM131LA2VDJ0 1609 aa33.32■■■□□ 2.92
SKP1-206ENST00000519321 FOXD1Q16676 465 aa33.32■■■□□ 2.92
SKP1-206ENST00000519321 TMEM2Q9UHN6 1383 aa33.32■■■□□ 2.92
SKP1-206ENST00000519321 POLR1AO95602 1720 aaPredicted RBP33.31■■■□□ 2.92
SKP1-206ENST00000519321 CHGAP10645 457 aaKnown RBP33.31■■■□□ 2.92
SKP1-206ENST00000519321 EID1Q9Y6B2 187 aa33.3■■■□□ 2.92
SKP1-206ENST00000519321 CLTCL1P53675 1640 aa33.29■■■□□ 2.92
SKP1-206ENST00000519321 HDGFP51858 240 aaKnown RBP33.26■■■□□ 2.91
SKP1-206ENST00000519321 TXNDC2Q86VQ3 553 aa33.25■■■□□ 2.91
SKP1-206ENST00000519321 CCDC144AA2RUR9 1427 aa33.25■■■□□ 2.91
SKP1-206ENST00000519321 SCAF11Q99590 1463 aaKnown RBP33.25■■■□□ 2.91
SKP1-206ENST00000519321 MED14O60244 1454 aa33.24■■■□□ 2.91
SKP1-206ENST00000519321 KIF1BO60333 1816 aa33.23■■■□□ 2.91
SKP1-206ENST00000519321 MYO5BQ9ULV0 1848 aa33.23■■■□□ 2.91
SKP1-206ENST00000519321 NEURL4Q96JN8 1562 aa33.21■■■□□ 2.91
SKP1-206ENST00000519321 NPHP4O75161 1426 aaPredicted RBP33.19■■■□□ 2.9
SKP1-206ENST00000519321 LTKP29376 864 aa33.19■■■□□ 2.9
SKP1-206ENST00000519321 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms