RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 HRCP23327 699 aa31.79■■■□□ 2.68
PCM1-210ENST00000518936 KANK1Q14678 1352 aa31.79■■■□□ 2.68
PCM1-210ENST00000518936 DEPDC5O75140 1603 aa31.75■■■□□ 2.67
PCM1-210ENST00000518936 ESF1Q9H501 851 aaKnown RBP31.75■■■□□ 2.67
PCM1-210ENST00000518936 PRDM15P57071 1507 aaPredicted RBP31.72■■■□□ 2.67
PCM1-210ENST00000518936 GGT6Q6P531 493 aa31.71■■■□□ 2.67
PCM1-210ENST00000518936 UNC13BO14795 1591 aa31.71■■■□□ 2.67
PCM1-210ENST00000518936 ZC3H13Q5T200 1668 aaKnown RBP31.7■■■□□ 2.67
PCM1-210ENST00000518936 PCGF6Q9BYE7 350 aa31.7■■■□□ 2.67
PCM1-210ENST00000518936 SIGLEC1Q9BZZ2 1709 aa31.69■■■□□ 2.66
PCM1-210ENST00000518936 CNTLNQ9NXG0 1405 aa31.69■■■□□ 2.66
PCM1-210ENST00000518936 RAB3GAP2Q9H2M9 1393 aa31.68■■■□□ 2.66
PCM1-210ENST00000518936 KDM5DQ9BY66 1539 aa31.65■■■□□ 2.66
PCM1-210ENST00000518936 WASHC2CQ9Y4E1 1318 aa31.64■■■□□ 2.66
PCM1-210ENST00000518936 MLECQ14165 292 aa31.63■■■□□ 2.65
PCM1-210ENST00000518936 FER1L4A9Z1Z3 1794 aa31.61■■■□□ 2.65
PCM1-210ENST00000518936 NUP155O75694 1391 aa31.61■■■□□ 2.65
PCM1-210ENST00000518936 TRIM52Q96A61 297 aa31.61■■■□□ 2.65
PCM1-210ENST00000518936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.61■■■□□ 2.652e-6■□□□□ 8.9
PCM1-210ENST00000518936 MROH1Q8NDA8 1641 aa31.6■■■□□ 2.65
PCM1-210ENST00000518936 IQGAP3Q86VI3 1631 aa31.6■■■□□ 2.65
PCM1-210ENST00000518936 ADAMTSL3P82987 1691 aa31.58■■■□□ 2.65
PCM1-210ENST00000518936 VWDEQ8N2E2 1590 aa31.58■■■□□ 2.65
PCM1-210ENST00000518936 LMTK2Q8IWU2 1503 aa31.58■■■□□ 2.65
PCM1-210ENST00000518936 MROH2AA6NES4 1674 aa31.57■■■□□ 2.65
PCM1-210ENST00000518936 ABCC3O15438 1527 aa31.54■■■□□ 2.64
PCM1-210ENST00000518936 TET3O43151 1660 aa31.52■■■□□ 2.64
PCM1-210ENST00000518936 CLTCQ00610 1675 aaKnown RBP31.52■■■□□ 2.64
PCM1-210ENST00000518936 MADDQ8WXG6 1647 aa31.5■■■□□ 2.63
PCM1-210ENST00000518936 CEP152O94986 1710 aa31.5■■■□□ 2.63
PCM1-210ENST00000518936 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
PCM1-210ENST00000518936 CAMSAP1Q5T5Y3 1602 aa31.48■■■□□ 2.63
PCM1-210ENST00000518936 ARHGAP31Q2M1Z3 1444 aa31.48■■■□□ 2.63
PCM1-210ENST00000518936 SLC4A1APQ9BWU0 796 aaKnown RBP31.47■■■□□ 2.63
PCM1-210ENST00000518936 EFCAB6Q5THR3 1501 aa31.45■■■□□ 2.63
PCM1-210ENST00000518936 RIMS1Q86UR5 1692 aaKnown RBP31.45■■■□□ 2.63
PCM1-210ENST00000518936 ZMYM3Q14202 1370 aa31.43■■■□□ 2.62
PCM1-210ENST00000518936 PZPP20742 1482 aa31.4■■■□□ 2.62
PCM1-210ENST00000518936 MPHOSPH9Q99550 1183 aa31.4■■■□□ 2.62
PCM1-210ENST00000518936 C3P01024 1663 aa31.35■■■□□ 2.61
PCM1-210ENST00000518936 PTPRMP28827 1452 aa31.34■■■□□ 2.61
PCM1-210ENST00000518936 NPATQ14207 1427 aa31.33■■■□□ 2.61
PCM1-210ENST00000518936 E9PCH4 1651 aa31.32■■■□□ 2.6
PCM1-210ENST00000518936 PKD2Q13563 968 aa31.32■■■□□ 2.6
PCM1-210ENST00000518936 KDM4FA0A1W2PPD8 638 aa31.3■■■□□ 2.6
PCM1-210ENST00000518936 PREX1Q8TCU6 1659 aa31.28■■■□□ 2.6
PCM1-210ENST00000518936 SETD1BQ9UPS6 1966 aaKnown RBP31.27■■■□□ 2.6
PCM1-210ENST00000518936 SPATA31D1Q6ZQQ2 1576 aa31.26■■■□□ 2.6
PCM1-210ENST00000518936 ERVK-7P63135 1459 aa31.26■■■□□ 2.59
PCM1-210ENST00000518936 SPHKAPQ2M3C7 1700 aa31.25■■■□□ 2.59
PCM1-210ENST00000518936 NOS1P29475 1434 aa31.22■■■□□ 2.59
PCM1-210ENST00000518936 CFAP65Q6ZU64 1925 aaKnown RBP31.22■■■□□ 2.59
PCM1-210ENST00000518936 SLC52A1Q9NWF4 448 aa31.21■■■□□ 2.59
PCM1-210ENST00000518936 PTPRTO14522 1441 aa31.21■■■□□ 2.59
PCM1-210ENST00000518936 TNRQ92752 1358 aa31.2■■■□□ 2.59
PCM1-210ENST00000518936 DHX57Q6P158 1386 aaKnown RBP31.19■■■□□ 2.58
PCM1-210ENST00000518936 TRPM2O94759 1503 aa31.19■■■□□ 2.58
PCM1-210ENST00000518936 NLRP1Q9C000 1473 aa31.18■■■□□ 2.58
PCM1-210ENST00000518936 CEBPAP49715 358 aaPredicted RBP31.17■■■□□ 2.58
PCM1-210ENST00000518936 CLSPNQ9HAW4 1339 aa31.17■■■□□ 2.58
PCM1-210ENST00000518936 PLPPR3Q6T4P5 718 aa31.14■■■□□ 2.58
PCM1-210ENST00000518936 CCDC144AA2RUR9 1427 aa31.14■■■□□ 2.58
PCM1-210ENST00000518936 FBXO31Q5XUX0 539 aaPredicted RBP31.13■■■□□ 2.57
PCM1-210ENST00000518936 SYNMO15061 1565 aa31.09■■■□□ 2.57
PCM1-210ENST00000518936 UHRF1BP1Q6BDS2 1440 aa31.09■■■□□ 2.57
PCM1-210ENST00000518936 ANKRD30BQ9BXX2 1392 aa31.09■■■□□ 2.57
PCM1-210ENST00000518936 KDM5AP29375 1690 aaKnown RBP31.08■■■□□ 2.57
PCM1-210ENST00000518936 PIK3C2BO00750 1634 aa31.07■■■□□ 2.56
PCM1-210ENST00000518936 MYO3AQ8NEV4 1616 aa31.07■■■□□ 2.56
PCM1-210ENST00000518936 FOXD1Q16676 465 aa31.07■■■□□ 2.56
PCM1-210ENST00000518936 CCER1Q8TC90 406 aaPredicted RBP31.06■■■□□ 2.56
PCM1-210ENST00000518936 KIF1BO60333 1816 aa31.05■■■□□ 2.56
PCM1-210ENST00000518936 STAG3Q9UJ98 1225 aa31.04■■■□□ 2.56
PCM1-210ENST00000518936 ZNF142P52746 1687 aaPredicted RBP31.03■■■□□ 2.56
PCM1-210ENST00000518936 A2ML1A8K2U0 1454 aa31.03■■■□□ 2.56
PCM1-210ENST00000518936 PLA2R1Q13018 1463 aa31.02■■■□□ 2.56
PCM1-210ENST00000518936 CEP170BQ9Y4F5 1589 aaPredicted RBP31■■■□□ 2.55
PCM1-210ENST00000518936 CLTCL1P53675 1640 aa31■■■□□ 2.55
PCM1-210ENST00000518936 NEURL4Q96JN8 1562 aa31■■■□□ 2.55
PCM1-210ENST00000518936 IDI1Q13907 227 aa30.99■■■□□ 2.55
PCM1-210ENST00000518936 UGGT1Q9NYU2 1555 aa30.98■■■□□ 2.55
PCM1-210ENST00000518936 ADGRB3O60242 1522 aa30.98■■■□□ 2.55
PCM1-210ENST00000518936 THEMISQ8N1K5 641 aaPredicted RBP30.97■■■□□ 2.55
PCM1-210ENST00000518936 HDGFP51858 240 aaKnown RBP30.95■■■□□ 2.55
PCM1-210ENST00000518936 UBR1Q8IWV7 1749 aa30.92■■■□□ 2.54
PCM1-210ENST00000518936 CHGAP10645 457 aaKnown RBP30.91■■■□□ 2.54
PCM1-210ENST00000518936 ILDR1Q86SU0 546 aaPredicted RBP30.91■■■□□ 2.54
PCM1-210ENST00000518936 TMEM131LA2VDJ0 1609 aa30.91■■■□□ 2.54
PCM1-210ENST00000518936 RPGRIP1LQ68CZ1 1315 aa30.89■■■□□ 2.54
PCM1-210ENST00000518936 STAC3Q96MF2 364 aa30.88■■■□□ 2.53
PCM1-210ENST00000518936 ZNF326Q5BKZ1 582 aaKnown RBP30.85■■■□□ 2.53
PCM1-210ENST00000518936 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.85■■■□□ 2.53
PCM1-210ENST00000518936 TIMELESSQ9UNS1 1208 aa30.83■■■□□ 2.53
PCM1-210ENST00000518936 SPATA31E1Q6ZUB1 1445 aa30.82■■■□□ 2.52
PCM1-210ENST00000518936 EID1Q9Y6B2 187 aa30.82■■■□□ 2.52
PCM1-210ENST00000518936 LMTK3Q96Q04 1460 aa30.82■■■□□ 2.52
PCM1-210ENST00000518936 MYO5BQ9ULV0 1848 aa30.8■■■□□ 2.52
PCM1-210ENST00000518936 SLIT1O75093 1534 aa30.8■■■□□ 2.52
PCM1-210ENST00000518936 TMEM2Q9UHN6 1383 aa30.79■■■□□ 2.52
PCM1-210ENST00000518936 NEUROD1Q13562 356 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms