RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 NISCHQ9Y2I1 1504 aa50.32■■■■■ 5.65
PCM1-210ENST00000518936 CCDC180Q9P1Z9 1646 aa44.6■■■■■ 4.73
PCM1-210ENST00000518936 ABCC9O60706 1549 aa42.74■■■■■ 4.43
PCM1-210ENST00000518936 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
PCM1-210ENST00000518936 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
PCM1-210ENST00000518936 MYO15BQ96JP2 1530 aa41.78■■■■■ 4.28
PCM1-210ENST00000518936 NACADO15069 1562 aa41.76■■■■■ 4.28
PCM1-210ENST00000518936 DCAF8L2P0C7V8 631 aa41.7■■■■■ 4.27
PCM1-210ENST00000518936 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
PCM1-210ENST00000518936 SCRIBQ14160 1630 aa40.55■■■■■ 4.08
PCM1-210ENST00000518936 UNC13AQ9UPW8 1703 aa40.53■■■■■ 4.08
PCM1-210ENST00000518936 BICRAQ9NZM4 1560 aa40.13■■■■■ 4.01
PCM1-210ENST00000518936 SHROOM4Q9ULL8 1493 aa40.13■■■■■ 4.01
PCM1-210ENST00000518936 PABPN1Q86U42 306 aaKnown RBP eCLIP39.98■■■■□ 3.99
PCM1-210ENST00000518936 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
PCM1-210ENST00000518936 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
PCM1-210ENST00000518936 CECR2Q9BXF3 1484 aa38.95■■■■□ 3.83
PCM1-210ENST00000518936 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
PCM1-210ENST00000518936 DNAJC5BQ9UF47 199 aa38.86■■■■□ 3.81
PCM1-210ENST00000518936 CC2D2AQ9P2K1 1620 aa38.76■■■■□ 3.8
PCM1-210ENST00000518936 MROH2BQ7Z745 1585 aa38.69■■■■□ 3.78
PCM1-210ENST00000518936 SMARCA2P51531 1590 aa38.65■■■■□ 3.78
PCM1-210ENST00000518936 PEG3Q9GZU2 1588 aa38.59■■■■□ 3.77
PCM1-210ENST00000518936 RSF1Q96T23 1441 aaPredicted RBP38.53■■■■□ 3.76
PCM1-210ENST00000518936 ATAD2BQ9ULI0 1458 aa38.5■■■■□ 3.75
PCM1-210ENST00000518936 NCAPD3P42695 1498 aa38.44■■■■□ 3.74
PCM1-210ENST00000518936 HMGXB3Q12766 1538 aa38.38■■■■□ 3.73
PCM1-210ENST00000518936 WIZO95785 1651 aa38.33■■■■□ 3.73
PCM1-210ENST00000518936 BAZ1BQ9UIG0 1483 aaKnown RBP38.3■■■■□ 3.72
PCM1-210ENST00000518936 TOP2AP11388 1531 aaKnown RBP38.08■■■■□ 3.69
PCM1-210ENST00000518936 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
PCM1-210ENST00000518936 CCDC88BA6NC98 1476 aa37.53■■■■□ 3.6
PCM1-210ENST00000518936 LAMC3Q9Y6N6 1575 aa37.4■■■■□ 3.58
PCM1-210ENST00000518936 CADPSQ9ULU8 1353 aa37.35■■■■□ 3.57
PCM1-210ENST00000518936 CFTRP13569 1480 aa37.26■■■■□ 3.56
PCM1-210ENST00000518936 PRDM2Q13029 1718 aa37.16■■■■□ 3.54
PCM1-210ENST00000518936 PDS5BQ9NTI5 1447 aa37.15■■■■□ 3.54
PCM1-210ENST00000518936 NESP48681 1621 aa37.11■■■■□ 3.53
PCM1-210ENST00000518936 ERCC6Q03468 1493 aa36.97■■■■□ 3.51
PCM1-210ENST00000518936 FANCD2Q9BXW9 1451 aa36.9■■■■□ 3.5
PCM1-210ENST00000518936 CEP164Q9UPV0 1460 aa36.86■■■■□ 3.49
PCM1-210ENST00000518936 KIF21AQ7Z4S6 1674 aa36.82■■■■□ 3.48
PCM1-210ENST00000518936 MRC2Q9UBG0 1479 aa36.64■■■■□ 3.46
PCM1-210ENST00000518936 ABCC8Q09428 1581 aa36.62■■■■□ 3.45
PCM1-210ENST00000518936 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
PCM1-210ENST00000518936 WDR62O43379 1518 aa36.48■■■■□ 3.43
PCM1-210ENST00000518936 DNMBPQ6XZF7 1577 aa36.46■■■■□ 3.43
PCM1-210ENST00000518936 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
PCM1-210ENST00000518936 URB2Q14146 1524 aaKnown RBP36.4■■■■□ 3.42
PCM1-210ENST00000518936 CUX2O14529 1486 aa36.37■■■■□ 3.41
PCM1-210ENST00000518936 TOPBP1Q92547 1522 aa36.37■■■■□ 3.41
PCM1-210ENST00000518936 CUX1P39880 1505 aa36.28■■■■□ 3.4
PCM1-210ENST00000518936 TOP2BQ02880 1626 aa36.26■■■■□ 3.4
PCM1-210ENST00000518936 BIVM-ERCC5R4GMW8 1640 aa36.26■■■■□ 3.39
PCM1-210ENST00000518936 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
PCM1-210ENST00000518936 DNAJC5Q9H3Z4 198 aa36.15■■■■□ 3.38
PCM1-210ENST00000518936 POLA1P09884 1462 aaPredicted RBP36.1■■■■□ 3.37
PCM1-210ENST00000518936 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
PCM1-210ENST00000518936 IFT140Q96RY7 1462 aa36.07■■■■□ 3.37
PCM1-210ENST00000518936 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
PCM1-210ENST00000518936 SOGA1O94964 1423 aa36■■■■□ 3.35
PCM1-210ENST00000518936 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
PCM1-210ENST00000518936 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
PCM1-210ENST00000518936 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
PCM1-210ENST00000518936 ABCA10Q8WWZ4 1543 aa35.85■■■■□ 3.33
PCM1-210ENST00000518936 RAD54L2Q9Y4B4 1467 aa35.83■■■■□ 3.33
PCM1-210ENST00000518936 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
PCM1-210ENST00000518936 EIF4G3O43432 1585 aaKnown RBP35.66■■■■□ 3.3
PCM1-210ENST00000518936 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
PCM1-210ENST00000518936 TDRD9Q8NDG6 1382 aaKnown RBP35.62■■■■□ 3.29
PCM1-210ENST00000518936 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
PCM1-210ENST00000518936 GAPVD1Q14C86 1478 aa35.61■■■■□ 3.29
PCM1-210ENST00000518936 AQRO60306 1485 aaKnown RBP eCLIP35.55■■■■□ 3.282e-8■■■■■ 51.7
PCM1-210ENST00000518936 GRIN2BQ13224 1484 aa35.55■■■■□ 3.28
PCM1-210ENST00000518936 EEA1Q15075 1411 aa35.53■■■■□ 3.28
PCM1-210ENST00000518936 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
PCM1-210ENST00000518936 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
PCM1-210ENST00000518936 MAGI1Q96QZ7 1491 aaPredicted RBP35.43■■■■□ 3.26
PCM1-210ENST00000518936 CUL7Q14999 1698 aa35.35■■■■□ 3.25
PCM1-210ENST00000518936 SNAPC4Q5SXM2 1469 aa35.32■■■■□ 3.24
PCM1-210ENST00000518936 IGF1RP08069 1367 aa35.28■■■■□ 3.24
PCM1-210ENST00000518936 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
PCM1-210ENST00000518936 SYNJ2O15056 1496 aa35.24■■■■□ 3.23
PCM1-210ENST00000518936 ADAMTS12P58397 1594 aa35.23■■■■□ 3.23
PCM1-210ENST00000518936 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
PCM1-210ENST00000518936 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
PCM1-210ENST00000518936 CHMP7Q8WUX9 453 aaPredicted RBP35.18■■■■□ 3.22
PCM1-210ENST00000518936 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
PCM1-210ENST00000518936 FBLN2P98095 1184 aa35.08■■■■□ 3.21
PCM1-210ENST00000518936 FAM9AQ8IZU1 332 aaPredicted RBP35.07■■■■□ 3.2
PCM1-210ENST00000518936 RAPGEF2Q9Y4G8 1499 aa35.07■■■■□ 3.2
PCM1-210ENST00000518936 CHD1O14646 1710 aa35.06■■■■□ 3.2
PCM1-210ENST00000518936 GRIN2AQ12879 1464 aa35.04■■■■□ 3.2
PCM1-210ENST00000518936 PRXQ9BXM0 1461 aa35.04■■■■□ 3.2
PCM1-210ENST00000518936 KIF21BO75037 1637 aa34.98■■■■□ 3.19
PCM1-210ENST00000518936 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
PCM1-210ENST00000518936 NUP160Q12769 1436 aa34.85■■■■□ 3.17
PCM1-210ENST00000518936 GOLGA3Q08378 1498 aa34.84■■■■□ 3.17
PCM1-210ENST00000518936 CEP170Q5SW79 1584 aa34.77■■■■□ 3.16
PCM1-210ENST00000518936 KIAA0586Q9BVV6 1533 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms