RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCDHGA11-202ENST00000518882 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
PCDHGA11-202ENST00000518882 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
PCDHGA11-202ENST00000518882 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
PCDHGA11-202ENST00000518882 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.17
PCDHGA11-202ENST00000518882 BRD4O60885 1362 aaPredicted RBP22.33■■□□□ 1.17
PCDHGA11-202ENST00000518882 CDC42BPBQ9Y5S2 1711 aa22.32■■□□□ 1.16
PCDHGA11-202ENST00000518882 TRPM1Q7Z4N2 1603 aa22.32■■□□□ 1.16
PCDHGA11-202ENST00000518882 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
PCDHGA11-202ENST00000518882 SAMD9LQ8IVG5 1584 aa22.31■■□□□ 1.16
PCDHGA11-202ENST00000518882 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
PCDHGA11-202ENST00000518882 RALBP1Q15311 655 aa22.29■■□□□ 1.16
PCDHGA11-202ENST00000518882 CCDC141Q6ZP82 1450 aa22.27■■□□□ 1.15
PCDHGA11-202ENST00000518882 PRAG1Q86YV5 1406 aa22.26■■□□□ 1.15
PCDHGA11-202ENST00000518882 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
PCDHGA11-202ENST00000518882 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
PCDHGA11-202ENST00000518882 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
PCDHGA11-202ENST00000518882 PARD3Q8TEW0 1356 aa22.22■■□□□ 1.15
PCDHGA11-202ENST00000518882 NBPF1Q3BBV0 1214 aa22.22■■□□□ 1.15
PCDHGA11-202ENST00000518882 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
PCDHGA11-202ENST00000518882 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.15
PCDHGA11-202ENST00000518882 PLA2R1Q13018 1463 aa22.2■■□□□ 1.14
PCDHGA11-202ENST00000518882 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
PCDHGA11-202ENST00000518882 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 UNC13BO14795 1591 aa22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 PER1O15534 1290 aaPredicted RBP22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 SYCP2Q9BX26 1530 aa22.19■■□□□ 1.14
PCDHGA11-202ENST00000518882 A2MP01023 1474 aa22.18■■□□□ 1.14
PCDHGA11-202ENST00000518882 EXOC6Q8TAG9 804 aa22.17■■□□□ 1.14
PCDHGA11-202ENST00000518882 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 GPRASP1Q5JY77 1395 aa22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 LAMC1P11047 1609 aa22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 PRDM15P57071 1507 aaPredicted RBP22.15■■□□□ 1.14
PCDHGA11-202ENST00000518882 DISP3Q9P2K9 1392 aa22.14■■□□□ 1.14
PCDHGA11-202ENST00000518882 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
PCDHGA11-202ENST00000518882 IPO9Q96P70 1041 aaKnown RBP22.13■■□□□ 1.13
PCDHGA11-202ENST00000518882 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
PCDHGA11-202ENST00000518882 RSPH4AQ5TD94 716 aa22.12■■□□□ 1.13
PCDHGA11-202ENST00000518882 TESK2Q96S53 571 aa22.12■■□□□ 1.13
PCDHGA11-202ENST00000518882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.12■■□□□ 1.13
PCDHGA11-202ENST00000518882 IQGAP3Q86VI3 1631 aa22.12■■□□□ 1.13
PCDHGA11-202ENST00000518882 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
PCDHGA11-202ENST00000518882 NBR1Q14596 966 aa22.11■■□□□ 1.13
PCDHGA11-202ENST00000518882 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
PCDHGA11-202ENST00000518882 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
PCDHGA11-202ENST00000518882 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
PCDHGA11-202ENST00000518882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
PCDHGA11-202ENST00000518882 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
PCDHGA11-202ENST00000518882 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
PCDHGA11-202ENST00000518882 PLEKHH2Q8IVE3 1493 aa22.08■■□□□ 1.13
PCDHGA11-202ENST00000518882 PLXNC1O60486 1568 aa22.08■■□□□ 1.12
PCDHGA11-202ENST00000518882 EIF2AK4Q9P2K8 1649 aaKnown RBP22.07■■□□□ 1.12
PCDHGA11-202ENST00000518882 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
PCDHGA11-202ENST00000518882 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
PCDHGA11-202ENST00000518882 PANK3Q9H999 370 aa22.05■■□□□ 1.12
PCDHGA11-202ENST00000518882 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
PCDHGA11-202ENST00000518882 RNF17Q9BXT8 1623 aaKnown RBP22.03■■□□□ 1.12
PCDHGA11-202ENST00000518882 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.12
PCDHGA11-202ENST00000518882 PLIN1O60240 522 aa22.01■■□□□ 1.11
PCDHGA11-202ENST00000518882 MAGI2Q86UL8 1455 aa22.01■■□□□ 1.11
PCDHGA11-202ENST00000518882 CHD1O14646 1710 aa22■■□□□ 1.11
PCDHGA11-202ENST00000518882 ZMYM4Q5VZL5 1548 aa22■■□□□ 1.11
PCDHGA11-202ENST00000518882 ATP10AO60312 1499 aa22■■□□□ 1.11
PCDHGA11-202ENST00000518882 TCERG1O14776 1098 aaKnown RBP22■■□□□ 1.11
PCDHGA11-202ENST00000518882 DUOX2Q9NRD8 1548 aa21.99■■□□□ 1.11
PCDHGA11-202ENST00000518882 INSRP06213 1382 aa21.99■■□□□ 1.11
PCDHGA11-202ENST00000518882 TMF1P82094 1093 aa21.98■■□□□ 1.11
PCDHGA11-202ENST00000518882 PDE4AP27815 886 aa21.97■■□□□ 1.11
PCDHGA11-202ENST00000518882 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
PCDHGA11-202ENST00000518882 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
PCDHGA11-202ENST00000518882 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
PCDHGA11-202ENST00000518882 WDR7Q9Y4E6 1490 aa21.94■■□□□ 1.1
PCDHGA11-202ENST00000518882 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
PCDHGA11-202ENST00000518882 IQGAP1P46940 1657 aa21.93■■□□□ 1.1
PCDHGA11-202ENST00000518882 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
PCDHGA11-202ENST00000518882 MADDQ8WXG6 1647 aa21.92■■□□□ 1.1
PCDHGA11-202ENST00000518882 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
PCDHGA11-202ENST00000518882 ABCC2Q92887 1545 aa21.91■■□□□ 1.1
PCDHGA11-202ENST00000518882 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
PCDHGA11-202ENST00000518882 MS4A1P11836 297 aa21.91■■□□□ 1.1
PCDHGA11-202ENST00000518882 C20orf194Q5TEA3 1177 aa21.88■■□□□ 1.09
PCDHGA11-202ENST00000518882 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
PCDHGA11-202ENST00000518882 PLEKHH1Q9ULM0 1364 aa21.86■■□□□ 1.09
PCDHGA11-202ENST00000518882 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
PCDHGA11-202ENST00000518882 ABCC1P33527 1531 aa21.85■■□□□ 1.09
PCDHGA11-202ENST00000518882 PLCH2O75038 1416 aa21.85■■□□□ 1.09
PCDHGA11-202ENST00000518882 TRAPPC8Q9Y2L5 1435 aa21.85■■□□□ 1.09
PCDHGA11-202ENST00000518882 CEP152O94986 1710 aa21.85■■□□□ 1.09
PCDHGA11-202ENST00000518882 AMER1Q5JTC6 1135 aaPredicted RBP21.84■■□□□ 1.09
PCDHGA11-202ENST00000518882 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.09
PCDHGA11-202ENST00000518882 MYOM1P52179 1685 aa21.83■■□□□ 1.09
PCDHGA11-202ENST00000518882 SYNMO15061 1565 aa21.83■■□□□ 1.09
PCDHGA11-202ENST00000518882 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
PCDHGA11-202ENST00000518882 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
PCDHGA11-202ENST00000518882 TRPM2O94759 1503 aa21.82■■□□□ 1.08
PCDHGA11-202ENST00000518882 DUSP27Q5VZP5 1158 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms