RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PDIA6Q15084 440 aa10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 DPYSL4O14531 572 aa10.01□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 SND1Q7KZF4 910 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 CSB-PGBD3P0DP91 1061 aa10□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 HIC1Q14526 733 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PBXIP1Q96AQ6 731 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 FCHSD2O94868 740 aa9.95□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 TSPYL2Q9H2G4 693 aaPredicted RBP9.94□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 GLMNQ92990 594 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 IGSF5Q9NSI5 407 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 FECHP22830 423 aa9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CWC22Q9HCG8 908 aaKnown RBP9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 REPIN1Q9BWE0 567 aaKnown RBP9.91□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CLCN1P35523 988 aa9.89□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TBC1D12O60347 775 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 NCLP19338 710 aaKnown RBP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 RFX1P22670 979 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 CERS3Q8IU89 383 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PSMD1Q99460 953 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 RFC5P40937 340 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 ABL2P42684 1182 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 BCCIPQ9P287 314 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 ANKRD13AQ8IZ07 590 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MRRFQ96E11 262 aaKnown RBP9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 SPATA32Q96LK8 384 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 TMUB1Q9BVT8 246 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CLSTN1O94985 981 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 DRC1Q96MC2 740 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 OSBPP22059 807 aa9.8□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 KIAA1522Q9P206 1035 aaPredicted RBP9.79□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 ERCC3P19447 782 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 ZNF592Q92610 1267 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SRPK2P78362 688 aaKnown RBP9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 PTGDRQ13258 359 aa9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 HDGFL1Q5TGJ6 251 aa9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SREK1Q8WXA9 508 aaKnown RBP9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TCF3P15923 654 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 DSG2Q14126 1118 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CCDC61Q9Y6R9 512 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SOCS7O14512 581 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CHADLQ6NUI6 762 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms