RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PDIA6Q15084 440 aa10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 DPYSL4O14531 572 aa10.01□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 SND1Q7KZF4 910 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 CSB-PGBD3P0DP91 1061 aa10□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 HIC1Q14526 733 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PBXIP1Q96AQ6 731 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
RNU6ATAC39P-201ENST00000516309 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 FCHSD2O94868 740 aa9.95□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 TSPYL2Q9H2G4 693 aaPredicted RBP9.94□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 GLMNQ92990 594 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 IGSF5Q9NSI5 407 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 FECHP22830 423 aa9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CWC22Q9HCG8 908 aaKnown RBP9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 REPIN1Q9BWE0 567 aaKnown RBP9.91□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
RNU6ATAC39P-201ENST00000516309 CLCN1P35523 988 aa9.89□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TBC1D12O60347 775 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 NCLP19338 710 aaKnown RBP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 RFX1P22670 979 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 CERS3Q8IU89 383 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 PSMD1Q99460 953 aa9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 RFC5P40937 340 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 ABL2P42684 1182 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 BCCIPQ9P287 314 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNU6ATAC39P-201ENST00000516309 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 ANKRD13AQ8IZ07 590 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MRRFQ96E11 262 aaKnown RBP9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 SPATA32Q96LK8 384 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 TMUB1Q9BVT8 246 aa9.82□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CLSTN1O94985 981 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 DRC1Q96MC2 740 aa9.81□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 OSBPP22059 807 aa9.8□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 KIAA1522Q9P206 1035 aaPredicted RBP9.79□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 ERCC3P19447 782 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
RNU6ATAC39P-201ENST00000516309 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 ZNF592Q92610 1267 aa9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SRPK2P78362 688 aaKnown RBP9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 PTGDRQ13258 359 aa9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 HDGFL1Q5TGJ6 251 aa9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SREK1Q8WXA9 508 aaKnown RBP9.76□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TCF3P15923 654 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 DSG2Q14126 1118 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CCDC61Q9Y6R9 512 aa9.75□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 SOCS7O14512 581 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 CHADLQ6NUI6 762 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms