RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
LMNA-225ENST00000515824 NCOA1Q15788 1441 aa29.68■■■□□ 2.34
LMNA-225ENST00000515824 SETD1BQ9UPS6 1966 aaKnown RBP29.68■■■□□ 2.34
LMNA-225ENST00000515824 HSPA2P54652 639 aa29.66■■■□□ 2.34
LMNA-225ENST00000515824 NPATQ14207 1427 aa29.65■■■□□ 2.34
LMNA-225ENST00000515824 UHRF1BP1Q6BDS2 1440 aa29.65■■■□□ 2.34
LMNA-225ENST00000515824 ERBINQ96RT1 1412 aa29.65■■■□□ 2.34
LMNA-225ENST00000515824 EIF2AK4Q9P2K8 1649 aaKnown RBP29.65■■■□□ 2.34
LMNA-225ENST00000515824 FAM135AQ9P2D6 1515 aa29.65■■■□□ 2.34
LMNA-225ENST00000515824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.33
LMNA-225ENST00000515824 ADGRL2O95490 1459 aa29.62■■■□□ 2.33
LMNA-225ENST00000515824 KDM5DQ9BY66 1539 aa29.62■■■□□ 2.33
LMNA-225ENST00000515824 PREX1Q8TCU6 1659 aa29.62■■■□□ 2.33
LMNA-225ENST00000515824 PTPRKQ15262 1439 aa29.6■■■□□ 2.33
LMNA-225ENST00000515824 RNF17Q9BXT8 1623 aaKnown RBP29.6■■■□□ 2.33
LMNA-225ENST00000515824 ITGAEP38570 1179 aa29.59■■■□□ 2.33
LMNA-225ENST00000515824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.56■■■□□ 2.322e-8■■■□□ 16.9
LMNA-225ENST00000515824 RRBP1Q9P2E9 1410 aaKnown RBP29.54■■■□□ 2.32
LMNA-225ENST00000515824 FBXO31Q5XUX0 539 aaPredicted RBP29.53■■■□□ 2.32
LMNA-225ENST00000515824 ROCK1Q13464 1354 aa29.52■■■□□ 2.32
LMNA-225ENST00000515824 KANK1Q14678 1352 aa29.52■■■□□ 2.32
LMNA-225ENST00000515824 PZPP20742 1482 aa29.51■■■□□ 2.31
LMNA-225ENST00000515824 ANKRD50Q9ULJ7 1429 aa29.51■■■□□ 2.31
LMNA-225ENST00000515824 ABCC3O15438 1527 aa29.5■■■□□ 2.31
LMNA-225ENST00000515824 MROH1Q8NDA8 1641 aa29.49■■■□□ 2.31
LMNA-225ENST00000515824 ZC3H13Q5T200 1668 aaKnown RBP29.47■■■□□ 2.31
LMNA-225ENST00000515824 PRDM15P57071 1507 aaPredicted RBP29.46■■■□□ 2.31
LMNA-225ENST00000515824 TNRQ92752 1358 aa29.46■■■□□ 2.31
LMNA-225ENST00000515824 DEPDC5O75140 1603 aa29.42■■■□□ 2.3
LMNA-225ENST00000515824 DMRT2Q9Y5R5 561 aa29.4■■■□□ 2.3
LMNA-225ENST00000515824 CEP152O94986 1710 aa29.39■■■□□ 2.3
LMNA-225ENST00000515824 MYO3AQ8NEV4 1616 aa29.38■■■□□ 2.29
LMNA-225ENST00000515824 ARHGAP31Q2M1Z3 1444 aa29.38■■■□□ 2.29
LMNA-225ENST00000515824 CAMSAP1Q5T5Y3 1602 aa29.37■■■□□ 2.29
LMNA-225ENST00000515824 CEP170BQ9Y4F5 1589 aaPredicted RBP29.36■■■□□ 2.29
LMNA-225ENST00000515824 A2ML1A8K2U0 1454 aa29.36■■■□□ 2.29
LMNA-225ENST00000515824 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
LMNA-225ENST00000515824 ERVK-7P63135 1459 aa29.33■■■□□ 2.29
LMNA-225ENST00000515824 NLRP1Q9C000 1473 aa29.33■■■□□ 2.29
LMNA-225ENST00000515824 VWDEQ8N2E2 1590 aa29.33■■■□□ 2.29
LMNA-225ENST00000515824 ZNF142P52746 1687 aaPredicted RBP29.32■■■□□ 2.28
LMNA-225ENST00000515824 SPATA31D1Q6ZQQ2 1576 aa29.32■■■□□ 2.28
LMNA-225ENST00000515824 THEMISQ8N1K5 641 aaPredicted RBP29.3■■■□□ 2.28
LMNA-225ENST00000515824 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
LMNA-225ENST00000515824 PKD2Q13563 968 aa29.27■■■□□ 2.28
LMNA-225ENST00000515824 PLA2R1Q13018 1463 aa29.26■■■□□ 2.27
LMNA-225ENST00000515824 CFAP65Q6ZU64 1925 aaKnown RBP29.26■■■□□ 2.27
LMNA-225ENST00000515824 NCKAP5LQ9HCH0 1330 aa29.25■■■□□ 2.27
LMNA-225ENST00000515824 PTPRTO14522 1441 aa29.24■■■□□ 2.27
LMNA-225ENST00000515824 NUP155O75694 1391 aa29.24■■■□□ 2.27
LMNA-225ENST00000515824 UNC13BO14795 1591 aa29.23■■■□□ 2.27
LMNA-225ENST00000515824 UGGT1Q9NYU2 1555 aa29.22■■■□□ 2.27
LMNA-225ENST00000515824 EFCAB6Q5THR3 1501 aa29.21■■■□□ 2.27
LMNA-225ENST00000515824 NAIPQ13075 1403 aa29.2■■■□□ 2.27
LMNA-225ENST00000515824 ANKLE2Q86XL3 938 aa29.18■■■□□ 2.26
LMNA-225ENST00000515824 RPRD2Q5VT52 1461 aaKnown RBP29.17■■■□□ 2.26
LMNA-225ENST00000515824 HFM1A2PYH4 1435 aa29.16■■■□□ 2.26
LMNA-225ENST00000515824 NOS1P29475 1434 aa29.16■■■□□ 2.26
LMNA-225ENST00000515824 IDI1Q13907 227 aa29.15■■■□□ 2.26
LMNA-225ENST00000515824 SLC52A1Q9NWF4 448 aa29.15■■■□□ 2.26
LMNA-225ENST00000515824 STAG3Q9UJ98 1225 aa29.15■■■□□ 2.26
LMNA-225ENST00000515824 TET3O43151 1660 aa29.15■■■□□ 2.26
LMNA-225ENST00000515824 IQGAP3Q86VI3 1631 aa29.12■■■□□ 2.25
LMNA-225ENST00000515824 GCC2Q8IWJ2 1684 aa29.09■■■□□ 2.25
LMNA-225ENST00000515824 TRIM52Q96A61 297 aa29.08■■■□□ 2.25
LMNA-225ENST00000515824 SYNMO15061 1565 aa29.06■■■□□ 2.24
LMNA-225ENST00000515824 CERKQ8TCT0 537 aa29.05■■■□□ 2.24
LMNA-225ENST00000515824 UBR1Q8IWV7 1749 aa29.05■■■□□ 2.24
LMNA-225ENST00000515824 PIK3C2BO00750 1634 aa29.03■■■□□ 2.24
LMNA-225ENST00000515824 EID1Q9Y6B2 187 aa29.03■■■□□ 2.24
LMNA-225ENST00000515824 TXNDC2Q86VQ3 553 aa29.02■■■□□ 2.24
LMNA-225ENST00000515824 E9PCH4 1651 aa29.02■■■□□ 2.24
LMNA-225ENST00000515824 NPHP4O75161 1426 aaPredicted RBP29■■■□□ 2.23
LMNA-225ENST00000515824 POLR1AO95602 1720 aaPredicted RBP29■■■□□ 2.23
LMNA-225ENST00000515824 TMEM2Q9UHN6 1383 aa29■■■□□ 2.23
LMNA-225ENST00000515824 MED14O60244 1454 aa28.99■■■□□ 2.23
LMNA-225ENST00000515824 ARHGAP23Q9P227 1491 aa28.98■■■□□ 2.23
LMNA-225ENST00000515824 NEURL4Q96JN8 1562 aa28.98■■■□□ 2.23
LMNA-225ENST00000515824 LTKP29376 864 aa28.98■■■□□ 2.23
LMNA-225ENST00000515824 SLIT1O75093 1534 aa28.98■■■□□ 2.23
LMNA-225ENST00000515824 ILDR1Q86SU0 546 aaPredicted RBP28.96■■■□□ 2.23
LMNA-225ENST00000515824 SCAF11Q99590 1463 aaKnown RBP28.96■■■□□ 2.23
LMNA-225ENST00000515824 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
LMNA-225ENST00000515824 ZNF335Q9H4Z2 1342 aaPredicted RBP28.95■■■□□ 2.23
LMNA-225ENST00000515824 CHGAP10645 457 aaKnown RBP28.95■■■□□ 2.22
LMNA-225ENST00000515824 FBXO41Q8TF61 875 aa28.95■■■□□ 2.22
LMNA-225ENST00000515824 SLC4A1APQ9BWU0 796 aaKnown RBP28.95■■■□□ 2.22
LMNA-225ENST00000515824 ADGRB3O60242 1522 aa28.94■■■□□ 2.22
LMNA-225ENST00000515824 ACIN1Q9UKV3 1341 aaKnown RBP28.94■■■□□ 2.22
LMNA-225ENST00000515824 HDGFP51858 240 aaKnown RBP28.91■■■□□ 2.22
LMNA-225ENST00000515824 SETD5Q9C0A6 1442 aa28.91■■■□□ 2.22
LMNA-225ENST00000515824 LTBP4Q8N2S1 1624 aa28.91■■■□□ 2.22
LMNA-225ENST00000515824 IQGAP1P46940 1657 aa28.87■■■□□ 2.21
LMNA-225ENST00000515824 TMEM131LA2VDJ0 1609 aa28.84■■■□□ 2.21
LMNA-225ENST00000515824 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.83■■■□□ 2.215e-9■□□□□ 8
LMNA-225ENST00000515824 MPHOSPH9Q99550 1183 aa28.83■■■□□ 2.21
LMNA-225ENST00000515824 SPHKAPQ2M3C7 1700 aa28.83■■■□□ 2.21
LMNA-225ENST00000515824 PPP1R15AO75807 674 aaPredicted RBP28.82■■■□□ 2.2
LMNA-225ENST00000515824 BCANQ96GW7 911 aa28.82■■■□□ 2.2
LMNA-225ENST00000515824 RIMS2Q9UQ26 1411 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms