RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 RIMS1Q86UR5 1692 aaKnown RBP31.44■■■□□ 2.62
TRIM41-208ENST00000515499 CNTLNQ9NXG0 1405 aa31.42■■■□□ 2.62
TRIM41-208ENST00000515499 PTPRMP28827 1452 aa31.42■■■□□ 2.62
TRIM41-208ENST00000515499 FAM135AQ9P2D6 1515 aa31.39■■■□□ 2.61
TRIM41-208ENST00000515499 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
TRIM41-208ENST00000515499 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
TRIM41-208ENST00000515499 NAIPQ13075 1403 aa31.36■■■□□ 2.61
TRIM41-208ENST00000515499 WASHC2CQ9Y4E1 1318 aa31.36■■■□□ 2.61
TRIM41-208ENST00000515499 DEPDC5O75140 1603 aa31.35■■■□□ 2.61
TRIM41-208ENST00000515499 HFM1A2PYH4 1435 aa31.35■■■□□ 2.61
TRIM41-208ENST00000515499 CLTCQ00610 1675 aaKnown RBP31.34■■■□□ 2.61
TRIM41-208ENST00000515499 MROH2AA6NES4 1674 aa31.33■■■□□ 2.61
TRIM41-208ENST00000515499 PRDM15P57071 1507 aaPredicted RBP31.33■■■□□ 2.61
TRIM41-208ENST00000515499 KDM5DQ9BY66 1539 aa31.33■■■□□ 2.61
TRIM41-208ENST00000515499 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
TRIM41-208ENST00000515499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.31■■■□□ 2.66e-9■■■■□ 23.1
TRIM41-208ENST00000515499 ZMYM3Q14202 1370 aa31.3■■■□□ 2.6
TRIM41-208ENST00000515499 KANK1Q14678 1352 aa31.3■■■□□ 2.6
TRIM41-208ENST00000515499 CEBPAP49715 358 aaPredicted RBP31.28■■■□□ 2.6
TRIM41-208ENST00000515499 ZC3H13Q5T200 1668 aaKnown RBP31.28■■■□□ 2.6
TRIM41-208ENST00000515499 ABCC3O15438 1527 aa31.28■■■□□ 2.6
TRIM41-208ENST00000515499 PLPPR3Q6T4P5 718 aa31.26■■■□□ 2.59
TRIM41-208ENST00000515499 C3P01024 1663 aa31.25■■■□□ 2.59
TRIM41-208ENST00000515499 UNC13BO14795 1591 aa31.24■■■□□ 2.59
TRIM41-208ENST00000515499 VWDEQ8N2E2 1590 aa31.24■■■□□ 2.59
TRIM41-208ENST00000515499 CEP152O94986 1710 aa31.21■■■□□ 2.59
TRIM41-208ENST00000515499 LMTK2Q8IWU2 1503 aa31.19■■■□□ 2.58
TRIM41-208ENST00000515499 NUP155O75694 1391 aa31.17■■■□□ 2.58
TRIM41-208ENST00000515499 PZPP20742 1482 aa31.16■■■□□ 2.58
TRIM41-208ENST00000515499 CAMSAP1Q5T5Y3 1602 aa31.16■■■□□ 2.58
TRIM41-208ENST00000515499 NPATQ14207 1427 aa31.15■■■□□ 2.58
TRIM41-208ENST00000515499 SETD5Q9C0A6 1442 aa31.15■■■□□ 2.58
TRIM41-208ENST00000515499 ARHGAP31Q2M1Z3 1444 aa31.15■■■□□ 2.58
TRIM41-208ENST00000515499 SETD1BQ9UPS6 1966 aaKnown RBP31.12■■■□□ 2.57
TRIM41-208ENST00000515499 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
TRIM41-208ENST00000515499 IQGAP3Q86VI3 1631 aa31.12■■■□□ 2.57
TRIM41-208ENST00000515499 ACIN1Q9UKV3 1341 aaKnown RBP31.1■■■□□ 2.57
TRIM41-208ENST00000515499 FBXO31Q5XUX0 539 aaPredicted RBP31.09■■■□□ 2.57
TRIM41-208ENST00000515499 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
TRIM41-208ENST00000515499 TET3O43151 1660 aa31.07■■■□□ 2.56
TRIM41-208ENST00000515499 EFCAB6Q5THR3 1501 aa31.07■■■□□ 2.56
TRIM41-208ENST00000515499 RAB3GAP2Q9H2M9 1393 aa31.04■■■□□ 2.56
TRIM41-208ENST00000515499 PREX1Q8TCU6 1659 aa31.02■■■□□ 2.56
TRIM41-208ENST00000515499 TNRQ92752 1358 aa31.02■■■□□ 2.56
TRIM41-208ENST00000515499 ERVK-7P63135 1459 aa31.01■■■□□ 2.56
TRIM41-208ENST00000515499 RPRD2Q5VT52 1461 aaKnown RBP31.01■■■□□ 2.56
TRIM41-208ENST00000515499 SPATA31D1Q6ZQQ2 1576 aa31.01■■■□□ 2.56
TRIM41-208ENST00000515499 HRCP23327 699 aa31.01■■■□□ 2.55
TRIM41-208ENST00000515499 CFAP65Q6ZU64 1925 aaKnown RBP31■■■□□ 2.55
TRIM41-208ENST00000515499 UHRF1BP1Q6BDS2 1440 aa30.99■■■□□ 2.55
TRIM41-208ENST00000515499 LMTK3Q96Q04 1460 aa30.95■■■□□ 2.55
TRIM41-208ENST00000515499 E9PCH4 1651 aa30.95■■■□□ 2.55
TRIM41-208ENST00000515499 SLC4A1APQ9BWU0 796 aaKnown RBP30.94■■■□□ 2.54
TRIM41-208ENST00000515499 NOS1P29475 1434 aa30.93■■■□□ 2.54
TRIM41-208ENST00000515499 MYO3AQ8NEV4 1616 aa30.93■■■□□ 2.54
TRIM41-208ENST00000515499 NLRP1Q9C000 1473 aa30.91■■■□□ 2.54
TRIM41-208ENST00000515499 MPHOSPH9Q99550 1183 aa30.89■■■□□ 2.54
TRIM41-208ENST00000515499 PKD2Q13563 968 aa30.88■■■□□ 2.53
TRIM41-208ENST00000515499 A2ML1A8K2U0 1454 aa30.88■■■□□ 2.53
TRIM41-208ENST00000515499 CEP170BQ9Y4F5 1589 aaPredicted RBP30.86■■■□□ 2.53
TRIM41-208ENST00000515499 ZNF142P52746 1687 aaPredicted RBP30.86■■■□□ 2.53
TRIM41-208ENST00000515499 SYNMO15061 1565 aa30.85■■■□□ 2.53
TRIM41-208ENST00000515499 SLC52A1Q9NWF4 448 aa30.84■■■□□ 2.53
TRIM41-208ENST00000515499 HSPA2P54652 639 aa30.82■■■□□ 2.52
TRIM41-208ENST00000515499 PTPRTO14522 1441 aa30.81■■■□□ 2.52
TRIM41-208ENST00000515499 IDI1Q13907 227 aa30.81■■■□□ 2.52
TRIM41-208ENST00000515499 SPHKAPQ2M3C7 1700 aa30.78■■■□□ 2.52
TRIM41-208ENST00000515499 THEMISQ8N1K5 641 aaPredicted RBP30.77■■■□□ 2.52
TRIM41-208ENST00000515499 UGGT1Q9NYU2 1555 aa30.77■■■□□ 2.52
TRIM41-208ENST00000515499 PIK3C2BO00750 1634 aa30.74■■■□□ 2.51
TRIM41-208ENST00000515499 FOXD1Q16676 465 aa30.73■■■□□ 2.51
TRIM41-208ENST00000515499 PLA2R1Q13018 1463 aa30.72■■■□□ 2.51
TRIM41-208ENST00000515499 TRPM2O94759 1503 aa30.72■■■□□ 2.51
TRIM41-208ENST00000515499 UBR1Q8IWV7 1749 aa30.71■■■□□ 2.51
TRIM41-208ENST00000515499 STAG3Q9UJ98 1225 aa30.71■■■□□ 2.51
TRIM41-208ENST00000515499 KDM5AP29375 1690 aaKnown RBP30.7■■■□□ 2.5
TRIM41-208ENST00000515499 PCGF6Q9BYE7 350 aa30.68■■■□□ 2.5
TRIM41-208ENST00000515499 ADGRB3O60242 1522 aa30.66■■■□□ 2.5
TRIM41-208ENST00000515499 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
TRIM41-208ENST00000515499 CLTCL1P53675 1640 aa30.62■■■□□ 2.49
TRIM41-208ENST00000515499 CHGAP10645 457 aaKnown RBP30.61■■■□□ 2.49
TRIM41-208ENST00000515499 STRCQ7RTU9 1775 aa30.61■■■□□ 2.49
TRIM41-208ENST00000515499 ANKLE2Q86XL3 938 aa30.6■■■□□ 2.49
TRIM41-208ENST00000515499 SLIT1O75093 1534 aa30.59■■■□□ 2.49
TRIM41-208ENST00000515499 ARHGAP23Q9P227 1491 aa30.58■■■□□ 2.49
TRIM41-208ENST00000515499 TMEM2Q9UHN6 1383 aa30.58■■■□□ 2.49
TRIM41-208ENST00000515499 NCKAP5LQ9HCH0 1330 aa30.58■■■□□ 2.49
TRIM41-208ENST00000515499 CCDC144AA2RUR9 1427 aa30.57■■■□□ 2.48
TRIM41-208ENST00000515499 ANKRD30BQ9BXX2 1392 aa30.56■■■□□ 2.48
TRIM41-208ENST00000515499 DMRT2Q9Y5R5 561 aa30.56■■■□□ 2.48
TRIM41-208ENST00000515499 MYO5BQ9ULV0 1848 aa30.56■■■□□ 2.48
TRIM41-208ENST00000515499 KIF1BO60333 1816 aa30.54■■■□□ 2.48
TRIM41-208ENST00000515499 EID1Q9Y6B2 187 aa30.53■■■□□ 2.48
TRIM41-208ENST00000515499 TXNDC2Q86VQ3 553 aa30.52■■■□□ 2.48
TRIM41-208ENST00000515499 POLR1AO95602 1720 aaPredicted RBP30.51■■■□□ 2.47
TRIM41-208ENST00000515499 HDGFP51858 240 aaKnown RBP30.51■■■□□ 2.47
TRIM41-208ENST00000515499 LTKP29376 864 aa30.5■■■□□ 2.47
TRIM41-208ENST00000515499 SCAF11Q99590 1463 aaKnown RBP30.49■■■□□ 2.47
TRIM41-208ENST00000515499 DHX57Q6P158 1386 aaKnown RBP30.48■■■□□ 2.47
TRIM41-208ENST00000515499 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms