RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 PTPRKQ15262 1439 aa20.26■□□□□ 0.83
CDK7-212ENST00000515180 NPATQ14207 1427 aa20.25■□□□□ 0.83
CDK7-212ENST00000515180 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
CDK7-212ENST00000515180 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
CDK7-212ENST00000515180 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
CDK7-212ENST00000515180 KIF15Q9NS87 1388 aa20.22■□□□□ 0.83
CDK7-212ENST00000515180 KDM5DQ9BY66 1539 aa20.22■□□□□ 0.83
CDK7-212ENST00000515180 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
CDK7-212ENST00000515180 STRCQ7RTU9 1775 aa20.21■□□□□ 0.83
CDK7-212ENST00000515180 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
CDK7-212ENST00000515180 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
CDK7-212ENST00000515180 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
CDK7-212ENST00000515180 MROH1Q8NDA8 1641 aa20.17■□□□□ 0.82
CDK7-212ENST00000515180 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
CDK7-212ENST00000515180 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
CDK7-212ENST00000515180 PZPP20742 1482 aa20.15■□□□□ 0.82
CDK7-212ENST00000515180 ABCC3O15438 1527 aa20.15■□□□□ 0.82
CDK7-212ENST00000515180 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
CDK7-212ENST00000515180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
CDK7-212ENST00000515180 CEP152O94986 1710 aa20.13■□□□□ 0.81
CDK7-212ENST00000515180 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CDK7-212ENST00000515180 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
CDK7-212ENST00000515180 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
CDK7-212ENST00000515180 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
CDK7-212ENST00000515180 TNRQ92752 1358 aa20.13■□□□□ 0.81
CDK7-212ENST00000515180 ZNF142P52746 1687 aaPredicted RBP20.12■□□□□ 0.81
CDK7-212ENST00000515180 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
CDK7-212ENST00000515180 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
CDK7-212ENST00000515180 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
CDK7-212ENST00000515180 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
CDK7-212ENST00000515180 ITGAEP38570 1179 aa20.09■□□□□ 0.81
CDK7-212ENST00000515180 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
CDK7-212ENST00000515180 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
CDK7-212ENST00000515180 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CDK7-212ENST00000515180 PTPRTO14522 1441 aa20.06■□□□□ 0.8
CDK7-212ENST00000515180 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
CDK7-212ENST00000515180 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
CDK7-212ENST00000515180 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
CDK7-212ENST00000515180 KANK1Q14678 1352 aa20.03■□□□□ 0.8
CDK7-212ENST00000515180 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
CDK7-212ENST00000515180 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
CDK7-212ENST00000515180 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
CDK7-212ENST00000515180 FBXO41Q8TF61 875 aa20.01■□□□□ 0.79
CDK7-212ENST00000515180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
CDK7-212ENST00000515180 PKD2Q13563 968 aa20■□□□□ 0.79
CDK7-212ENST00000515180 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
CDK7-212ENST00000515180 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
CDK7-212ENST00000515180 ARHGAP31Q2M1Z3 1444 aa19.98■□□□□ 0.79
CDK7-212ENST00000515180 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
CDK7-212ENST00000515180 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
CDK7-212ENST00000515180 ROCK1Q13464 1354 aa19.95■□□□□ 0.79
CDK7-212ENST00000515180 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
CDK7-212ENST00000515180 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
CDK7-212ENST00000515180 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
CDK7-212ENST00000515180 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
CDK7-212ENST00000515180 LTBP4Q8N2S1 1624 aa19.93■□□□□ 0.78
CDK7-212ENST00000515180 NEURL4Q96JN8 1562 aa19.92■□□□□ 0.78
CDK7-212ENST00000515180 POLR1AO95602 1720 aaPredicted RBP19.92■□□□□ 0.78
CDK7-212ENST00000515180 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
CDK7-212ENST00000515180 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
CDK7-212ENST00000515180 UNC13BO14795 1591 aa19.89■□□□□ 0.77
CDK7-212ENST00000515180 IDI1Q13907 227 aa19.88■□□□□ 0.77
CDK7-212ENST00000515180 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
CDK7-212ENST00000515180 SYNMO15061 1565 aa19.87■□□□□ 0.77
CDK7-212ENST00000515180 NOS1P29475 1434 aa19.86■□□□□ 0.77
CDK7-212ENST00000515180 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
CDK7-212ENST00000515180 TET3O43151 1660 aa19.85■□□□□ 0.77
CDK7-212ENST00000515180 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
CDK7-212ENST00000515180 LTKP29376 864 aa19.84■□□□□ 0.77
CDK7-212ENST00000515180 NUP155O75694 1391 aa19.83■□□□□ 0.77
CDK7-212ENST00000515180 MED14O60244 1454 aa19.83■□□□□ 0.76
CDK7-212ENST00000515180 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
CDK7-212ENST00000515180 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
CDK7-212ENST00000515180 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
CDK7-212ENST00000515180 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
CDK7-212ENST00000515180 ARHGAP23Q9P227 1491 aa19.8■□□□□ 0.76
CDK7-212ENST00000515180 E9PCH4 1651 aa19.8■□□□□ 0.76
CDK7-212ENST00000515180 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
CDK7-212ENST00000515180 SLIT1O75093 1534 aa19.79■□□□□ 0.76
CDK7-212ENST00000515180 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
CDK7-212ENST00000515180 NAIPQ13075 1403 aa19.78■□□□□ 0.76
CDK7-212ENST00000515180 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
CDK7-212ENST00000515180 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
CDK7-212ENST00000515180 EID1Q9Y6B2 187 aa19.76■□□□□ 0.75
CDK7-212ENST00000515180 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
CDK7-212ENST00000515180 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
CDK7-212ENST00000515180 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
CDK7-212ENST00000515180 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
CDK7-212ENST00000515180 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
CDK7-212ENST00000515180 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
CDK7-212ENST00000515180 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
CDK7-212ENST00000515180 HFM1A2PYH4 1435 aa19.7■□□□□ 0.74
CDK7-212ENST00000515180 UBAP1LF5GYI3 381 aa19.7■□□□□ 0.74
CDK7-212ENST00000515180 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
CDK7-212ENST00000515180 CPS1P31327 1500 aa19.7■□□□□ 0.74
CDK7-212ENST00000515180 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
CDK7-212ENST00000515180 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
CDK7-212ENST00000515180 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
CDK7-212ENST00000515180 BCANQ96GW7 911 aa19.66■□□□□ 0.74
CDK7-212ENST00000515180 RIMS2Q9UQ26 1411 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms