RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 ZMYM3Q14202 1370 aa13.3□□□□□ -0.28
ABCC3-215ENST00000515070 ITGAEP38570 1179 aa13.28□□□□□ -0.28
ABCC3-215ENST00000515070 KANK1Q14678 1352 aa13.28□□□□□ -0.28
ABCC3-215ENST00000515070 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
ABCC3-215ENST00000515070 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.28
ABCC3-215ENST00000515070 NPATQ14207 1427 aa13.27□□□□□ -0.29
ABCC3-215ENST00000515070 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
ABCC3-215ENST00000515070 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
ABCC3-215ENST00000515070 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
ABCC3-215ENST00000515070 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
ABCC3-215ENST00000515070 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
ABCC3-215ENST00000515070 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
ABCC3-215ENST00000515070 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
ABCC3-215ENST00000515070 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
ABCC3-215ENST00000515070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
ABCC3-215ENST00000515070 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
ABCC3-215ENST00000515070 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
ABCC3-215ENST00000515070 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.3
ABCC3-215ENST00000515070 PZPP20742 1482 aa13.2□□□□□ -0.3
ABCC3-215ENST00000515070 ZC3H13Q5T200 1668 aaKnown RBP13.2□□□□□ -0.3
ABCC3-215ENST00000515070 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
ABCC3-215ENST00000515070 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
ABCC3-215ENST00000515070 ABCC3O15438 1527 aa13.19□□□□□ -0.3
ABCC3-215ENST00000515070 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
ABCC3-215ENST00000515070 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
ABCC3-215ENST00000515070 C3P01024 1663 aa13.18□□□□□ -0.3
ABCC3-215ENST00000515070 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
ABCC3-215ENST00000515070 NAIPQ13075 1403 aa13.17□□□□□ -0.3
ABCC3-215ENST00000515070 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
ABCC3-215ENST00000515070 TNRQ92752 1358 aa13.16□□□□□ -0.3
ABCC3-215ENST00000515070 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
ABCC3-215ENST00000515070 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
ABCC3-215ENST00000515070 NUP155O75694 1391 aa13.15□□□□□ -0.3
ABCC3-215ENST00000515070 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
ABCC3-215ENST00000515070 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
ABCC3-215ENST00000515070 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
ABCC3-215ENST00000515070 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
ABCC3-215ENST00000515070 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
ABCC3-215ENST00000515070 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
ABCC3-215ENST00000515070 SLC52A1Q9NWF4 448 aa13.12□□□□□ -0.31
ABCC3-215ENST00000515070 UNC13BO14795 1591 aa13.11□□□□□ -0.31
ABCC3-215ENST00000515070 HRCP23327 699 aa13.11□□□□□ -0.31
ABCC3-215ENST00000515070 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
ABCC3-215ENST00000515070 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
ABCC3-215ENST00000515070 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
ABCC3-215ENST00000515070 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
ABCC3-215ENST00000515070 EFCAB6Q5THR3 1501 aa13.09□□□□□ -0.31
ABCC3-215ENST00000515070 HSPA2P54652 639 aa13.09□□□□□ -0.31
ABCC3-215ENST00000515070 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
ABCC3-215ENST00000515070 PKD2Q13563 968 aa13.08□□□□□ -0.32
ABCC3-215ENST00000515070 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
ABCC3-215ENST00000515070 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
ABCC3-215ENST00000515070 NOS1P29475 1434 aa13.07□□□□□ -0.32
ABCC3-215ENST00000515070 IQGAP3Q86VI3 1631 aa13.06□□□□□ -0.32
ABCC3-215ENST00000515070 TET3O43151 1660 aa13.06□□□□□ -0.32
ABCC3-215ENST00000515070 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
ABCC3-215ENST00000515070 CEP152O94986 1710 aa13.06□□□□□ -0.32
ABCC3-215ENST00000515070 CEP170BQ9Y4F5 1589 aaPredicted RBP13.06□□□□□ -0.32
ABCC3-215ENST00000515070 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
ABCC3-215ENST00000515070 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
ABCC3-215ENST00000515070 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
ABCC3-215ENST00000515070 IDI1Q13907 227 aa13.04□□□□□ -0.32
ABCC3-215ENST00000515070 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
ABCC3-215ENST00000515070 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
ABCC3-215ENST00000515070 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
ABCC3-215ENST00000515070 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
ABCC3-215ENST00000515070 PTPRTO14522 1441 aa13.02□□□□□ -0.33
ABCC3-215ENST00000515070 EID1Q9Y6B2 187 aa13.01□□□□□ -0.33
ABCC3-215ENST00000515070 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
ABCC3-215ENST00000515070 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
ABCC3-215ENST00000515070 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
ABCC3-215ENST00000515070 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
ABCC3-215ENST00000515070 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
ABCC3-215ENST00000515070 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
ABCC3-215ENST00000515070 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
ABCC3-215ENST00000515070 SYNMO15061 1565 aa12.97□□□□□ -0.33
ABCC3-215ENST00000515070 E9PCH4 1651 aa12.96□□□□□ -0.33
ABCC3-215ENST00000515070 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
ABCC3-215ENST00000515070 SLIT1O75093 1534 aa12.96□□□□□ -0.33
ABCC3-215ENST00000515070 ARHGAP23Q9P227 1491 aa12.96□□□□□ -0.34
ABCC3-215ENST00000515070 MED14O60244 1454 aa12.95□□□□□ -0.34
ABCC3-215ENST00000515070 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
ABCC3-215ENST00000515070 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
ABCC3-215ENST00000515070 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
ABCC3-215ENST00000515070 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
ABCC3-215ENST00000515070 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
ABCC3-215ENST00000515070 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
ABCC3-215ENST00000515070 UBR1Q8IWV7 1749 aa12.93□□□□□ -0.34
ABCC3-215ENST00000515070 TRPM2O94759 1503 aa12.93□□□□□ -0.34
ABCC3-215ENST00000515070 NPHP4O75161 1426 aaPredicted RBP12.92□□□□□ -0.34
ABCC3-215ENST00000515070 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
ABCC3-215ENST00000515070 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
ABCC3-215ENST00000515070 LTKP29376 864 aa12.91□□□□□ -0.34
ABCC3-215ENST00000515070 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
ABCC3-215ENST00000515070 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
ABCC3-215ENST00000515070 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
ABCC3-215ENST00000515070 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
ABCC3-215ENST00000515070 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
ABCC3-215ENST00000515070 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
ABCC3-215ENST00000515070 FOXD1Q16676 465 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms