RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 PREX1Q8TCU6 1659 aa12.95□□□□□ -0.34
COPG1-209ENST00000514478 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
COPG1-209ENST00000514478 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
COPG1-209ENST00000514478 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
COPG1-209ENST00000514478 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
COPG1-209ENST00000514478 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
COPG1-209ENST00000514478 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
COPG1-209ENST00000514478 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
COPG1-209ENST00000514478 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
COPG1-209ENST00000514478 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
COPG1-209ENST00000514478 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
COPG1-209ENST00000514478 ABCA6Q8N139 1617 aa12.92□□□□□ -0.34
COPG1-209ENST00000514478 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
COPG1-209ENST00000514478 NUP155O75694 1391 aa12.92□□□□□ -0.34
COPG1-209ENST00000514478 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
COPG1-209ENST00000514478 PZPP20742 1482 aa12.91□□□□□ -0.34
COPG1-209ENST00000514478 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
COPG1-209ENST00000514478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.341e-10■■□□□ 13.4
COPG1-209ENST00000514478 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
COPG1-209ENST00000514478 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
COPG1-209ENST00000514478 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
COPG1-209ENST00000514478 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
COPG1-209ENST00000514478 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
COPG1-209ENST00000514478 CEP152O94986 1710 aa12.88□□□□□ -0.35
COPG1-209ENST00000514478 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
COPG1-209ENST00000514478 A2MP01023 1474 aa12.87□□□□□ -0.35
COPG1-209ENST00000514478 FOXD1Q16676 465 aa12.87□□□□□ -0.35
COPG1-209ENST00000514478 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
COPG1-209ENST00000514478 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
COPG1-209ENST00000514478 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
COPG1-209ENST00000514478 KANK1Q14678 1352 aa12.85□□□□□ -0.35
COPG1-209ENST00000514478 PKD2Q13563 968 aa12.85□□□□□ -0.35
COPG1-209ENST00000514478 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
COPG1-209ENST00000514478 CFAP65Q6ZU64 1925 aaKnown RBP12.84□□□□□ -0.35
COPG1-209ENST00000514478 TET3O43151 1660 aa12.84□□□□□ -0.35
COPG1-209ENST00000514478 KIF3BO15066 747 aa12.84□□□□□ -0.35
COPG1-209ENST00000514478 E9PCH4 1651 aa12.83□□□□□ -0.35
COPG1-209ENST00000514478 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
COPG1-209ENST00000514478 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
COPG1-209ENST00000514478 MLECQ14165 292 aa12.82□□□□□ -0.36
COPG1-209ENST00000514478 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
COPG1-209ENST00000514478 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
COPG1-209ENST00000514478 ATP10AO60312 1499 aa12.81□□□□□ -0.36
COPG1-209ENST00000514478 HSPA2P54652 639 aa12.81□□□□□ -0.36
COPG1-209ENST00000514478 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
COPG1-209ENST00000514478 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
COPG1-209ENST00000514478 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
COPG1-209ENST00000514478 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
COPG1-209ENST00000514478 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
COPG1-209ENST00000514478 ZC3H13Q5T200 1668 aaKnown RBP12.78□□□□□ -0.36
COPG1-209ENST00000514478 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
COPG1-209ENST00000514478 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.37
COPG1-209ENST00000514478 KIF1BO60333 1816 aa12.76□□□□□ -0.37
COPG1-209ENST00000514478 GGT6Q6P531 493 aa12.76□□□□□ -0.37
COPG1-209ENST00000514478 REREQ9P2R6 1566 aa12.76□□□□□ -0.37
COPG1-209ENST00000514478 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
COPG1-209ENST00000514478 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
COPG1-209ENST00000514478 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
COPG1-209ENST00000514478 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
COPG1-209ENST00000514478 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
COPG1-209ENST00000514478 C3P01024 1663 aa12.73□□□□□ -0.37
COPG1-209ENST00000514478 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
COPG1-209ENST00000514478 SOCS7O14512 581 aa12.73□□□□□ -0.37
COPG1-209ENST00000514478 LMTK2Q8IWU2 1503 aa12.72□□□□□ -0.37
COPG1-209ENST00000514478 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
COPG1-209ENST00000514478 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
COPG1-209ENST00000514478 PTPRTO14522 1441 aa12.71□□□□□ -0.37
COPG1-209ENST00000514478 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
COPG1-209ENST00000514478 ABCC3O15438 1527 aa12.71□□□□□ -0.38
COPG1-209ENST00000514478 TRPM2O94759 1503 aa12.71□□□□□ -0.38
COPG1-209ENST00000514478 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
COPG1-209ENST00000514478 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
COPG1-209ENST00000514478 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
COPG1-209ENST00000514478 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
COPG1-209ENST00000514478 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
COPG1-209ENST00000514478 AGLP35573 1532 aa12.7□□□□□ -0.38
COPG1-209ENST00000514478 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
COPG1-209ENST00000514478 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
COPG1-209ENST00000514478 ZNF326Q5BKZ1 582 aaKnown RBP12.65□□□□□ -0.38
COPG1-209ENST00000514478 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
COPG1-209ENST00000514478 MYO5BQ9ULV0 1848 aa12.64□□□□□ -0.39
COPG1-209ENST00000514478 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
COPG1-209ENST00000514478 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
COPG1-209ENST00000514478 NPATQ14207 1427 aa12.62□□□□□ -0.39
COPG1-209ENST00000514478 DCAF11Q8TEB1 546 aa12.62□□□□□ -0.39
COPG1-209ENST00000514478 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
COPG1-209ENST00000514478 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
COPG1-209ENST00000514478 TRPM1Q7Z4N2 1603 aa12.6□□□□□ -0.39
COPG1-209ENST00000514478 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
COPG1-209ENST00000514478 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
COPG1-209ENST00000514478 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
COPG1-209ENST00000514478 SYNMO15061 1565 aa12.6□□□□□ -0.39
COPG1-209ENST00000514478 PIK3C2BO00750 1634 aa12.59□□□□□ -0.39
COPG1-209ENST00000514478 PPLO60437 1756 aa12.59□□□□□ -0.39
COPG1-209ENST00000514478 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
COPG1-209ENST00000514478 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
COPG1-209ENST00000514478 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
COPG1-209ENST00000514478 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
COPG1-209ENST00000514478 NOS1P29475 1434 aa12.56□□□□□ -0.4
COPG1-209ENST00000514478 LTBP4Q8N2S1 1624 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms