RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
AFP-206ENST00000514279 PTCD2Q8WV60 388 aaKnown RBP10.55□□□□□ -0.72
AFP-206ENST00000514279 FOXK1P85037 733 aa10.54□□□□□ -0.72
AFP-206ENST00000514279 POLA1P09884 1462 aaPredicted RBP10.54□□□□□ -0.72
AFP-206ENST00000514279 KDM4FA0A1W2PPD8 638 aa10.53□□□□□ -0.72
AFP-206ENST00000514279 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
AFP-206ENST00000514279 AQRO60306 1485 aaKnown RBP eCLIP10.52□□□□□ -0.73
AFP-206ENST00000514279 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.73
AFP-206ENST00000514279 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
AFP-206ENST00000514279 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
AFP-206ENST00000514279 DSG2Q14126 1118 aa10.51□□□□□ -0.73
AFP-206ENST00000514279 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
AFP-206ENST00000514279 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
AFP-206ENST00000514279 CUX1P39880 1505 aa10.5□□□□□ -0.73
AFP-206ENST00000514279 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
AFP-206ENST00000514279 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
AFP-206ENST00000514279 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
AFP-206ENST00000514279 TBC1D12O60347 775 aa10.48□□□□□ -0.73
AFP-206ENST00000514279 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
AFP-206ENST00000514279 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
AFP-206ENST00000514279 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
AFP-206ENST00000514279 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
AFP-206ENST00000514279 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
AFP-206ENST00000514279 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
AFP-206ENST00000514279 UPF1Q92900 1129 aaKnown RBP eCLIP10.44□□□□□ -0.74
AFP-206ENST00000514279 WDR97A6NE52 1622 aa10.44□□□□□ -0.74
AFP-206ENST00000514279 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
AFP-206ENST00000514279 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
AFP-206ENST00000514279 ABCA10Q8WWZ4 1543 aa10.42□□□□□ -0.74
AFP-206ENST00000514279 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
AFP-206ENST00000514279 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
AFP-206ENST00000514279 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
AFP-206ENST00000514279 WNT2BQ93097 391 aa10.4□□□□□ -0.74
AFP-206ENST00000514279 MAGI1Q96QZ7 1491 aaPredicted RBP10.39□□□□□ -0.75
AFP-206ENST00000514279 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
AFP-206ENST00000514279 LCE2BO14633 110 aa10.39□□□□□ -0.75
AFP-206ENST00000514279 SNAPC4Q5SXM2 1469 aa10.38□□□□□ -0.75
AFP-206ENST00000514279 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
AFP-206ENST00000514279 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
AFP-206ENST00000514279 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
AFP-206ENST00000514279 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
AFP-206ENST00000514279 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
AFP-206ENST00000514279 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
AFP-206ENST00000514279 BIVM-ERCC5R4GMW8 1640 aa10.36□□□□□ -0.75
AFP-206ENST00000514279 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
AFP-206ENST00000514279 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
AFP-206ENST00000514279 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
AFP-206ENST00000514279 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
AFP-206ENST00000514279 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
AFP-206ENST00000514279 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
AFP-206ENST00000514279 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
AFP-206ENST00000514279 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
AFP-206ENST00000514279 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
AFP-206ENST00000514279 FHAD1B1AJZ9 1412 aa10.32□□□□□ -0.76
AFP-206ENST00000514279 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
AFP-206ENST00000514279 PTPREP23469 700 aa10.3□□□□□ -0.76
AFP-206ENST00000514279 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
AFP-206ENST00000514279 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
AFP-206ENST00000514279 FOSBP53539 338 aa10.29□□□□□ -0.76
AFP-206ENST00000514279 CHD1O14646 1710 aa10.29□□□□□ -0.76
AFP-206ENST00000514279 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
AFP-206ENST00000514279 IGF1RP08069 1367 aa10.28□□□□□ -0.76
AFP-206ENST00000514279 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
AFP-206ENST00000514279 ARHGEF11O15085 1522 aa10.27□□□□□ -0.77
AFP-206ENST00000514279 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 EVI5O60447 810 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 GFRA3O60609 400 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 PDE4AP27815 886 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
AFP-206ENST00000514279 RIMBP3CA6NJZ7 1639 aa10.24□□□□□ -0.77
AFP-206ENST00000514279 RIMBP3BA6NNM3 1639 aa10.24□□□□□ -0.77
AFP-206ENST00000514279 RIMBP3Q9UFD9 1639 aa10.24□□□□□ -0.77
AFP-206ENST00000514279 CARMIL1Q5VZK9 1371 aa10.24□□□□□ -0.77
AFP-206ENST00000514279 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
AFP-206ENST00000514279 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
AFP-206ENST00000514279 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
AFP-206ENST00000514279 NBPF3Q9H094 633 aa10.23□□□□□ -0.77
AFP-206ENST00000514279 NUP160Q12769 1436 aa10.22□□□□□ -0.77
AFP-206ENST00000514279 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
AFP-206ENST00000514279 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
AFP-206ENST00000514279 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
AFP-206ENST00000514279 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
AFP-206ENST00000514279 MAP3K9P80192 1104 aa10.19□□□□□ -0.78
AFP-206ENST00000514279 ZNF787Q6DD87 383 aa10.19□□□□□ -0.78
AFP-206ENST00000514279 KCNC4Q03721 635 aa10.18□□□□□ -0.78
AFP-206ENST00000514279 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
AFP-206ENST00000514279 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
AFP-206ENST00000514279 ZNF775Q96BV0 537 aaPredicted RBP10.17□□□□□ -0.78
AFP-206ENST00000514279 NRG2O14511 850 aaPredicted RBP10.16□□□□□ -0.78
AFP-206ENST00000514279 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
AFP-206ENST00000514279 PRG4Q92954 1404 aaPredicted RBP10.16□□□□□ -0.78
AFP-206ENST00000514279 CEP170Q5SW79 1584 aa10.15□□□□□ -0.78
AFP-206ENST00000514279 KIAA0586Q9BVV6 1533 aa10.15□□□□□ -0.78
AFP-206ENST00000514279 CUL7Q14999 1698 aa10.15□□□□□ -0.79
AFP-206ENST00000514279 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
AFP-206ENST00000514279 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
AFP-206ENST00000514279 NYAP1Q6ZVC0 841 aa10.14□□□□□ -0.79
AFP-206ENST00000514279 FAM9AQ8IZU1 332 aaPredicted RBP10.14□□□□□ -0.79
AFP-206ENST00000514279 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms