RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
AFP-206ENST00000514279 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
AFP-206ENST00000514279 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
AFP-206ENST00000514279 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
AFP-206ENST00000514279 FOXD1Q16676 465 aa21.38■■□□□ 1.01
AFP-206ENST00000514279 POTEDQ86YR6 584 aa21.29■■□□□ 1
AFP-206ENST00000514279 MSH5O43196 834 aa20.35■□□□□ 0.85
AFP-206ENST00000514279 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
AFP-206ENST00000514279 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
AFP-206ENST00000514279 ADRA2BP18089 450 aa19.23■□□□□ 0.67
AFP-206ENST00000514279 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
AFP-206ENST00000514279 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
AFP-206ENST00000514279 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
AFP-206ENST00000514279 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
AFP-206ENST00000514279 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
AFP-206ENST00000514279 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
AFP-206ENST00000514279 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
AFP-206ENST00000514279 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
AFP-206ENST00000514279 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
AFP-206ENST00000514279 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
AFP-206ENST00000514279 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
AFP-206ENST00000514279 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
AFP-206ENST00000514279 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
AFP-206ENST00000514279 POTEHQ6S545 545 aa16.52■□□□□ 0.24
AFP-206ENST00000514279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
AFP-206ENST00000514279 DSG3P32926 999 aa15.9■□□□□ 0.14
AFP-206ENST00000514279 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
AFP-206ENST00000514279 CAPN15O75808 1086 aa15.79■□□□□ 0.12
AFP-206ENST00000514279 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
AFP-206ENST00000514279 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
AFP-206ENST00000514279 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
AFP-206ENST00000514279 ABCB7O75027 752 aa15.35■□□□□ 0.05
AFP-206ENST00000514279 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
AFP-206ENST00000514279 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
AFP-206ENST00000514279 KCNA4P22459 653 aa15.24■□□□□ 0.03
AFP-206ENST00000514279 APLP2Q06481 763 aa15.23■□□□□ 0.03
AFP-206ENST00000514279 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
AFP-206ENST00000514279 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
AFP-206ENST00000514279 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
AFP-206ENST00000514279 SLC4A2P04920 1241 aa15.07■□□□□ 0
AFP-206ENST00000514279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
AFP-206ENST00000514279 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
AFP-206ENST00000514279 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
AFP-206ENST00000514279 POLA2Q14181 598 aa14.73□□□□□ -0.05
AFP-206ENST00000514279 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
AFP-206ENST00000514279 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
AFP-206ENST00000514279 HAX1O00165 279 aa14.62□□□□□ -0.07
AFP-206ENST00000514279 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
AFP-206ENST00000514279 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
AFP-206ENST00000514279 MYCNP04198 464 aaPredicted RBP14.51□□□□□ -0.09
AFP-206ENST00000514279 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
AFP-206ENST00000514279 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
AFP-206ENST00000514279 EVX2Q03828 476 aa14.37□□□□□ -0.11
AFP-206ENST00000514279 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
AFP-206ENST00000514279 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
AFP-206ENST00000514279 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
AFP-206ENST00000514279 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
AFP-206ENST00000514279 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
AFP-206ENST00000514279 LHX8Q68G74 356 aa14.15□□□□□ -0.14
AFP-206ENST00000514279 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
AFP-206ENST00000514279 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
AFP-206ENST00000514279 ZBTB22O15209 634 aa14□□□□□ -0.17
AFP-206ENST00000514279 GABBR2O75899 941 aa14□□□□□ -0.17
AFP-206ENST00000514279 PLSCR2Q9NRY7 297 aa13.94□□□□□ -0.18
AFP-206ENST00000514279 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
AFP-206ENST00000514279 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
AFP-206ENST00000514279 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
AFP-206ENST00000514279 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
AFP-206ENST00000514279 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
AFP-206ENST00000514279 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
AFP-206ENST00000514279 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
AFP-206ENST00000514279 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
AFP-206ENST00000514279 FBLN2P98095 1184 aa13.66□□□□□ -0.22
AFP-206ENST00000514279 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
AFP-206ENST00000514279 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
AFP-206ENST00000514279 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
AFP-206ENST00000514279 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
AFP-206ENST00000514279 CLCN6P51797 869 aa13.51□□□□□ -0.25
AFP-206ENST00000514279 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
AFP-206ENST00000514279 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
AFP-206ENST00000514279 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
AFP-206ENST00000514279 POTEMA6NI47 508 aa13.36□□□□□ -0.27
AFP-206ENST00000514279 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
AFP-206ENST00000514279 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
AFP-206ENST00000514279 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
AFP-206ENST00000514279 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
AFP-206ENST00000514279 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
AFP-206ENST00000514279 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
AFP-206ENST00000514279 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
AFP-206ENST00000514279 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
AFP-206ENST00000514279 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
AFP-206ENST00000514279 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
AFP-206ENST00000514279 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
AFP-206ENST00000514279 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
AFP-206ENST00000514279 LCE2DQ5TA82 110 aaPredicted RBP12.92□□□□□ -0.34
AFP-206ENST00000514279 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
AFP-206ENST00000514279 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
AFP-206ENST00000514279 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
AFP-206ENST00000514279 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
AFP-206ENST00000514279 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms