RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
DHFR-206ENST00000513048 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
DHFR-206ENST00000513048 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
DHFR-206ENST00000513048 COL17A1Q9UMD9 1497 aaPredicted RBP13.84□□□□□ -0.19
DHFR-206ENST00000513048 CLSPNQ9HAW4 1339 aa13.84□□□□□ -0.19
DHFR-206ENST00000513048 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
DHFR-206ENST00000513048 UNC13BO14795 1591 aa13.83□□□□□ -0.19
DHFR-206ENST00000513048 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
DHFR-206ENST00000513048 PZPP20742 1482 aa13.83□□□□□ -0.2
DHFR-206ENST00000513048 MAGI2Q86UL8 1455 aa13.81□□□□□ -0.2
DHFR-206ENST00000513048 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
DHFR-206ENST00000513048 CACNB1Q02641 598 aaPredicted RBP13.81□□□□□ -0.2
DHFR-206ENST00000513048 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
DHFR-206ENST00000513048 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
DHFR-206ENST00000513048 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
DHFR-206ENST00000513048 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
DHFR-206ENST00000513048 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
DHFR-206ENST00000513048 A2MP01023 1474 aa13.79□□□□□ -0.2
DHFR-206ENST00000513048 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
DHFR-206ENST00000513048 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
DHFR-206ENST00000513048 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
DHFR-206ENST00000513048 MROH1Q8NDA8 1641 aa13.77□□□□□ -0.21
DHFR-206ENST00000513048 IQGAP3Q86VI3 1631 aa13.76□□□□□ -0.21
DHFR-206ENST00000513048 NUP155O75694 1391 aa13.76□□□□□ -0.21
DHFR-206ENST00000513048 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
DHFR-206ENST00000513048 FAM135AQ9P2D6 1515 aa13.75□□□□□ -0.21
DHFR-206ENST00000513048 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
DHFR-206ENST00000513048 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
DHFR-206ENST00000513048 REREQ9P2R6 1566 aa13.74□□□□□ -0.21
DHFR-206ENST00000513048 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
DHFR-206ENST00000513048 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
DHFR-206ENST00000513048 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
DHFR-206ENST00000513048 ARHGEF40Q8TER5 1519 aa13.72□□□□□ -0.21
DHFR-206ENST00000513048 ATP10AO60312 1499 aa13.72□□□□□ -0.21
DHFR-206ENST00000513048 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.21
DHFR-206ENST00000513048 KIF3BO15066 747 aa13.7□□□□□ -0.22
DHFR-206ENST00000513048 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
DHFR-206ENST00000513048 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
DHFR-206ENST00000513048 AGLP35573 1532 aa13.69□□□□□ -0.22
DHFR-206ENST00000513048 PKD2Q13563 968 aa13.69□□□□□ -0.22
DHFR-206ENST00000513048 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
DHFR-206ENST00000513048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.224e-9■□□□□ 9.5
DHFR-206ENST00000513048 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
DHFR-206ENST00000513048 TET3O43151 1660 aa13.67□□□□□ -0.22
DHFR-206ENST00000513048 E9PCH4 1651 aa13.66□□□□□ -0.22
DHFR-206ENST00000513048 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
DHFR-206ENST00000513048 CEP152O94986 1710 aa13.64□□□□□ -0.23
DHFR-206ENST00000513048 ABCC3O15438 1527 aa13.64□□□□□ -0.23
DHFR-206ENST00000513048 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
DHFR-206ENST00000513048 KANK1Q14678 1352 aa13.63□□□□□ -0.23
DHFR-206ENST00000513048 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
DHFR-206ENST00000513048 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
DHFR-206ENST00000513048 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
DHFR-206ENST00000513048 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
DHFR-206ENST00000513048 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
DHFR-206ENST00000513048 PTPRTO14522 1441 aa13.61□□□□□ -0.23
DHFR-206ENST00000513048 GGT6Q6P531 493 aa13.6□□□□□ -0.23
DHFR-206ENST00000513048 CAMSAP1Q5T5Y3 1602 aa13.59□□□□□ -0.23
DHFR-206ENST00000513048 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
DHFR-206ENST00000513048 TRPM2O94759 1503 aa13.58□□□□□ -0.24
DHFR-206ENST00000513048 NPATQ14207 1427 aa13.56□□□□□ -0.24
DHFR-206ENST00000513048 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
DHFR-206ENST00000513048 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
DHFR-206ENST00000513048 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
DHFR-206ENST00000513048 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
DHFR-206ENST00000513048 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
DHFR-206ENST00000513048 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
DHFR-206ENST00000513048 CCDC144AA2RUR9 1427 aa13.53□□□□□ -0.24
DHFR-206ENST00000513048 NOS1P29475 1434 aa13.53□□□□□ -0.24
DHFR-206ENST00000513048 CLTCQ00610 1675 aaKnown RBP13.53□□□□□ -0.24
DHFR-206ENST00000513048 L3MBTL2Q969R5 705 aa13.52□□□□□ -0.25
DHFR-206ENST00000513048 SYNMO15061 1565 aa13.5□□□□□ -0.25
DHFR-206ENST00000513048 SPATA31E1Q6ZUB1 1445 aa13.5□□□□□ -0.25
DHFR-206ENST00000513048 CNTLNQ9NXG0 1405 aa13.5□□□□□ -0.25
DHFR-206ENST00000513048 NEURL4Q96JN8 1562 aa13.49□□□□□ -0.25
DHFR-206ENST00000513048 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
DHFR-206ENST00000513048 CFAP65Q6ZU64 1925 aaKnown RBP13.49□□□□□ -0.25
DHFR-206ENST00000513048 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
DHFR-206ENST00000513048 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
DHFR-206ENST00000513048 MLECQ14165 292 aa13.48□□□□□ -0.25
DHFR-206ENST00000513048 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
DHFR-206ENST00000513048 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
DHFR-206ENST00000513048 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
DHFR-206ENST00000513048 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
DHFR-206ENST00000513048 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
DHFR-206ENST00000513048 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
DHFR-206ENST00000513048 KIF1BO60333 1816 aa13.44□□□□□ -0.26
DHFR-206ENST00000513048 NBPF8Q3BBV2 869 aa13.44□□□□□ -0.26
DHFR-206ENST00000513048 ZMYM3Q14202 1370 aa13.44□□□□□ -0.26
DHFR-206ENST00000513048 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
DHFR-206ENST00000513048 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
DHFR-206ENST00000513048 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
DHFR-206ENST00000513048 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
DHFR-206ENST00000513048 IDI1Q13907 227 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 SLC52A1Q9NWF4 448 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 C3P01024 1663 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms