RNA–Protein interactions for RNA: ENST00000512744.5

PLXND1-214, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 2,662 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-214ENST00000512744 ABCA8O94911 1581 aa22.38■■□□□ 1.17
PLXND1-214ENST00000512744 CC2D1BQ5T0F9 858 aaKnown RBP22.38■■□□□ 1.17
PLXND1-214ENST00000512744 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
PLXND1-214ENST00000512744 EXOC6Q8TAG9 804 aa22.38■■□□□ 1.17
PLXND1-214ENST00000512744 NBR1Q14596 966 aa22.37■■□□□ 1.17
PLXND1-214ENST00000512744 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
PLXND1-214ENST00000512744 MYBBP1AQ9BQG0 1328 aaKnown RBP22.37■■□□□ 1.17
PLXND1-214ENST00000512744 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
PLXND1-214ENST00000512744 SKAP1Q86WV1 359 aa22.34■■□□□ 1.17
PLXND1-214ENST00000512744 PTPRGP23470 1445 aa22.32■■□□□ 1.16
PLXND1-214ENST00000512744 PLIN1O60240 522 aa22.32■■□□□ 1.16
PLXND1-214ENST00000512744 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
PLXND1-214ENST00000512744 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
PLXND1-214ENST00000512744 PER1O15534 1290 aaPredicted RBP22.31■■□□□ 1.16
PLXND1-214ENST00000512744 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
PLXND1-214ENST00000512744 RALBP1Q15311 655 aa22.3■■□□□ 1.16
PLXND1-214ENST00000512744 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
PLXND1-214ENST00000512744 PLA2R1Q13018 1463 aa22.3■■□□□ 1.16
PLXND1-214ENST00000512744 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
PLXND1-214ENST00000512744 DISP3Q9P2K9 1392 aa22.3■■□□□ 1.16
PLXND1-214ENST00000512744 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
PLXND1-214ENST00000512744 SAMD9LQ8IVG5 1584 aa22.29■■□□□ 1.16
PLXND1-214ENST00000512744 KDM5DQ9BY66 1539 aa22.28■■□□□ 1.16
PLXND1-214ENST00000512744 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
PLXND1-214ENST00000512744 CCDC144AA2RUR9 1427 aa22.27■■□□□ 1.16
PLXND1-214ENST00000512744 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
PLXND1-214ENST00000512744 PANK3Q9H999 370 aa22.26■■□□□ 1.15
PLXND1-214ENST00000512744 TESK2Q96S53 571 aa22.25■■□□□ 1.15
PLXND1-214ENST00000512744 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
PLXND1-214ENST00000512744 NLRP13Q86W25 1043 aa22.25■■□□□ 1.15
PLXND1-214ENST00000512744 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
PLXND1-214ENST00000512744 KTN1Q86UP2 1357 aaKnown RBP22.24■■□□□ 1.15
PLXND1-214ENST00000512744 PARD3Q8TEW0 1356 aa22.23■■□□□ 1.15
PLXND1-214ENST00000512744 SYCP2Q9BX26 1530 aa22.23■■□□□ 1.15
PLXND1-214ENST00000512744 A2MP01023 1474 aa22.23■■□□□ 1.15
PLXND1-214ENST00000512744 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
PLXND1-214ENST00000512744 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
PLXND1-214ENST00000512744 E9PCH4 1651 aa22.2■■□□□ 1.15
PLXND1-214ENST00000512744 DEKP35659 375 aaKnown RBP22.2■■□□□ 1.14
PLXND1-214ENST00000512744 TRPM1Q7Z4N2 1603 aa22.19■■□□□ 1.14
PLXND1-214ENST00000512744 ARHGEF5Q12774 1597 aa22.18■■□□□ 1.14
PLXND1-214ENST00000512744 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
PLXND1-214ENST00000512744 TTC37Q6PGP7 1564 aa22.16■■□□□ 1.14
PLXND1-214ENST00000512744 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
PLXND1-214ENST00000512744 ANP32AP39687 249 aaKnown RBP22.15■■□□□ 1.14
PLXND1-214ENST00000512744 C20orf194Q5TEA3 1177 aa22.15■■□□□ 1.14
PLXND1-214ENST00000512744 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
PLXND1-214ENST00000512744 PREX2Q70Z35 1606 aa22.12■■□□□ 1.13
PLXND1-214ENST00000512744 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
PLXND1-214ENST00000512744 ERBINQ96RT1 1412 aa22.12■■□□□ 1.13
PLXND1-214ENST00000512744 CRBNQ96SW2 442 aa22.12■■□□□ 1.13
PLXND1-214ENST00000512744 COL17A1Q9UMD9 1497 aaPredicted RBP22.11■■□□□ 1.13
PLXND1-214ENST00000512744 ZBTB47Q9UFB7 747 aaPredicted RBP22.1■■□□□ 1.13
PLXND1-214ENST00000512744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
PLXND1-214ENST00000512744 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
PLXND1-214ENST00000512744 PDE4AP27815 886 aa22.09■■□□□ 1.13
PLXND1-214ENST00000512744 TMF1P82094 1093 aa22.07■■□□□ 1.12
PLXND1-214ENST00000512744 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
PLXND1-214ENST00000512744 PRDM15P57071 1507 aaPredicted RBP22.04■■□□□ 1.12
PLXND1-214ENST00000512744 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
PLXND1-214ENST00000512744 MAGI2Q86UL8 1455 aa22.04■■□□□ 1.12
PLXND1-214ENST00000512744 AFAP1Q8N556 730 aa22.03■■□□□ 1.12
PLXND1-214ENST00000512744 PDE3BQ13370 1112 aa22.03■■□□□ 1.12
PLXND1-214ENST00000512744 MYO5CQ9NQX4 1742 aa22.02■■□□□ 1.12
PLXND1-214ENST00000512744 UNC13BO14795 1591 aa22.02■■□□□ 1.12
PLXND1-214ENST00000512744 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
PLXND1-214ENST00000512744 BACH2Q9BYV9 841 aa22.01■■□□□ 1.11
PLXND1-214ENST00000512744 PPP2R1AP30153 589 aa22■■□□□ 1.11
PLXND1-214ENST00000512744 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
PLXND1-214ENST00000512744 BLMP54132 1417 aaPredicted RBP22■■□□□ 1.11
PLXND1-214ENST00000512744 TRAPPC8Q9Y2L5 1435 aa22■■□□□ 1.11
PLXND1-214ENST00000512744 TCERG1O14776 1098 aaKnown RBP21.99■■□□□ 1.11
PLXND1-214ENST00000512744 KNSTRNQ9Y448 316 aa21.97■■□□□ 1.11
PLXND1-214ENST00000512744 WDR7Q9Y4E6 1490 aa21.96■■□□□ 1.11
PLXND1-214ENST00000512744 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
PLXND1-214ENST00000512744 AMER1Q5JTC6 1135 aaPredicted RBP21.96■■□□□ 1.11
PLXND1-214ENST00000512744 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.1
PLXND1-214ENST00000512744 CHD1O14646 1710 aa21.94■■□□□ 1.1
PLXND1-214ENST00000512744 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
PLXND1-214ENST00000512744 DUSP27Q5VZP5 1158 aa21.93■■□□□ 1.1
PLXND1-214ENST00000512744 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
PLXND1-214ENST00000512744 SLC4A3P48751 1232 aa21.93■■□□□ 1.1
PLXND1-214ENST00000512744 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
PLXND1-214ENST00000512744 DUOX2Q9NRD8 1548 aa21.91■■□□□ 1.1
PLXND1-214ENST00000512744 EFCAB2Q5VUJ9 269 aa21.91■■□□□ 1.1
PLXND1-214ENST00000512744 ZMYM4Q5VZL5 1548 aa21.89■■□□□ 1.1
PLXND1-214ENST00000512744 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.1
PLXND1-214ENST00000512744 PLXNC1O60486 1568 aa21.89■■□□□ 1.09
PLXND1-214ENST00000512744 PLCH2O75038 1416 aa21.88■■□□□ 1.09
PLXND1-214ENST00000512744 SPAG9O60271 1321 aaKnown RBP21.87■■□□□ 1.09
PLXND1-214ENST00000512744 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
PLXND1-214ENST00000512744 CFAP70Q5T0N1 1121 aa21.87■■□□□ 1.09
PLXND1-214ENST00000512744 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
PLXND1-214ENST00000512744 ATP10AO60312 1499 aa21.87■■□□□ 1.09
PLXND1-214ENST00000512744 MYT1LQ9UL68 1186 aa21.86■■□□□ 1.09
PLXND1-214ENST00000512744 LAMC1P11047 1609 aa21.86■■□□□ 1.09
PLXND1-214ENST00000512744 APAF1O14727 1248 aa21.85■■□□□ 1.09
PLXND1-214ENST00000512744 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
PLXND1-214ENST00000512744 BCAR3O75815 825 aa21.84■■□□□ 1.09
PLXND1-214ENST00000512744 MS4A1P11836 297 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms