RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ABCA6Q8N139 1617 aa16.07■□□□□ 0.16
PFDN1-204ENST00000512707 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
PFDN1-204ENST00000512707 ARHGEF40Q8TER5 1519 aa16.05■□□□□ 0.16
PFDN1-204ENST00000512707 ATP10AO60312 1499 aa16.05■□□□□ 0.16
PFDN1-204ENST00000512707 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
PFDN1-204ENST00000512707 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
PFDN1-204ENST00000512707 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
PFDN1-204ENST00000512707 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
PFDN1-204ENST00000512707 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
PFDN1-204ENST00000512707 PTPRMP28827 1452 aa16.01■□□□□ 0.15
PFDN1-204ENST00000512707 KANK1Q14678 1352 aa16■□□□□ 0.15
PFDN1-204ENST00000512707 BCORL1Q5H9F3 1711 aa16■□□□□ 0.15
PFDN1-204ENST00000512707 KIF3BO15066 747 aa16■□□□□ 0.15
PFDN1-204ENST00000512707 UNC13BO14795 1591 aa15.98■□□□□ 0.15
PFDN1-204ENST00000512707 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
PFDN1-204ENST00000512707 NUP155O75694 1391 aa15.98■□□□□ 0.15
PFDN1-204ENST00000512707 AGLP35573 1532 aa15.97■□□□□ 0.15
PFDN1-204ENST00000512707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
PFDN1-204ENST00000512707 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
PFDN1-204ENST00000512707 KDM5DQ9BY66 1539 aa15.95■□□□□ 0.14
PFDN1-204ENST00000512707 DEPDC5O75140 1603 aa15.95■□□□□ 0.14
PFDN1-204ENST00000512707 RNF17Q9BXT8 1623 aaKnown RBP15.95■□□□□ 0.14
PFDN1-204ENST00000512707 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
PFDN1-204ENST00000512707 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
PFDN1-204ENST00000512707 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
PFDN1-204ENST00000512707 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
PFDN1-204ENST00000512707 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
PFDN1-204ENST00000512707 GGT6Q6P531 493 aa15.92■□□□□ 0.14
PFDN1-204ENST00000512707 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
PFDN1-204ENST00000512707 FAM135AQ9P2D6 1515 aa15.92■□□□□ 0.14
PFDN1-204ENST00000512707 MPHOSPH9Q99550 1183 aa15.91■□□□□ 0.14
PFDN1-204ENST00000512707 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
PFDN1-204ENST00000512707 LMTK3Q96Q04 1460 aa15.91■□□□□ 0.14
PFDN1-204ENST00000512707 PZPP20742 1482 aa15.9■□□□□ 0.14
PFDN1-204ENST00000512707 RIMS1Q86UR5 1692 aaKnown RBP15.89■□□□□ 0.13
PFDN1-204ENST00000512707 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
PFDN1-204ENST00000512707 WASHC2CQ9Y4E1 1318 aa15.89■□□□□ 0.13
PFDN1-204ENST00000512707 MROH1Q8NDA8 1641 aa15.88■□□□□ 0.13
PFDN1-204ENST00000512707 VWDEQ8N2E2 1590 aa15.87■□□□□ 0.13
PFDN1-204ENST00000512707 ZC3H13Q5T200 1668 aaKnown RBP15.87■□□□□ 0.13
PFDN1-204ENST00000512707 LMTK2Q8IWU2 1503 aa15.86■□□□□ 0.13
PFDN1-204ENST00000512707 PKD2Q13563 968 aa15.86■□□□□ 0.13
PFDN1-204ENST00000512707 TET3O43151 1660 aa15.86■□□□□ 0.13
PFDN1-204ENST00000512707 MLECQ14165 292 aa15.85■□□□□ 0.13
PFDN1-204ENST00000512707 SIGLEC1Q9BZZ2 1709 aa15.84■□□□□ 0.13
PFDN1-204ENST00000512707 ABCC3O15438 1527 aa15.84■□□□□ 0.13
PFDN1-204ENST00000512707 CNTLNQ9NXG0 1405 aa15.82■□□□□ 0.12
PFDN1-204ENST00000512707 EFCAB6Q5THR3 1501 aa15.82■□□□□ 0.12
PFDN1-204ENST00000512707 CEP152O94986 1710 aa15.81■□□□□ 0.12
PFDN1-204ENST00000512707 RPRD2Q5VT52 1461 aaKnown RBP15.81■□□□□ 0.12
PFDN1-204ENST00000512707 CAMSAP1Q5T5Y3 1602 aa15.8■□□□□ 0.12
PFDN1-204ENST00000512707 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
PFDN1-204ENST00000512707 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
PFDN1-204ENST00000512707 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
PFDN1-204ENST00000512707 ARHGAP31Q2M1Z3 1444 aa15.77■□□□□ 0.12
PFDN1-204ENST00000512707 E9PCH4 1651 aa15.77■□□□□ 0.12
PFDN1-204ENST00000512707 CLTCQ00610 1675 aaKnown RBP15.76■□□□□ 0.11
PFDN1-204ENST00000512707 ANKRD30BQ9BXX2 1392 aa15.76■□□□□ 0.11
PFDN1-204ENST00000512707 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
PFDN1-204ENST00000512707 NPATQ14207 1427 aa15.75■□□□□ 0.11
PFDN1-204ENST00000512707 MROH2AA6NES4 1674 aa15.73■□□□□ 0.11
PFDN1-204ENST00000512707 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
PFDN1-204ENST00000512707 TRPM2O94759 1503 aa15.73■□□□□ 0.11
PFDN1-204ENST00000512707 PTPRTO14522 1441 aa15.72■□□□□ 0.11
PFDN1-204ENST00000512707 HSPA2P54652 639 aa15.72■□□□□ 0.11
PFDN1-204ENST00000512707 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
PFDN1-204ENST00000512707 PREX1Q8TCU6 1659 aa15.71■□□□□ 0.11
PFDN1-204ENST00000512707 ZMYM3Q14202 1370 aa15.71■□□□□ 0.11
PFDN1-204ENST00000512707 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
PFDN1-204ENST00000512707 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
PFDN1-204ENST00000512707 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
PFDN1-204ENST00000512707 ERVK-7P63135 1459 aa15.68■□□□□ 0.1
PFDN1-204ENST00000512707 NOS1P29475 1434 aa15.68■□□□□ 0.1
PFDN1-204ENST00000512707 PLA2R1Q13018 1463 aa15.67■□□□□ 0.1
PFDN1-204ENST00000512707 MSH5O43196 834 aa15.67■□□□□ 0.1
PFDN1-204ENST00000512707 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
PFDN1-204ENST00000512707 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
PFDN1-204ENST00000512707 SPATA31D1Q6ZQQ2 1576 aa15.65■□□□□ 0.1
PFDN1-204ENST00000512707 CERKQ8TCT0 537 aa15.64■□□□□ 0.09
PFDN1-204ENST00000512707 STRCQ7RTU9 1775 aa15.63■□□□□ 0.09
PFDN1-204ENST00000512707 FBXO31Q5XUX0 539 aaPredicted RBP15.63■□□□□ 0.09
PFDN1-204ENST00000512707 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
PFDN1-204ENST00000512707 C3P01024 1663 aa15.63■□□□□ 0.09
PFDN1-204ENST00000512707 TNRQ92752 1358 aa15.62■□□□□ 0.09
PFDN1-204ENST00000512707 SYNMO15061 1565 aa15.62■□□□□ 0.09
PFDN1-204ENST00000512707 CFAP65Q6ZU64 1925 aaKnown RBP15.6■□□□□ 0.09
PFDN1-204ENST00000512707 CHGAP10645 457 aaKnown RBP15.6■□□□□ 0.09
PFDN1-204ENST00000512707 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PFDN1-204ENST00000512707 PIK3C2BO00750 1634 aa15.6■□□□□ 0.09
PFDN1-204ENST00000512707 KIF1BO60333 1816 aa15.59■□□□□ 0.09
PFDN1-204ENST00000512707 NEURL4Q96JN8 1562 aa15.59■□□□□ 0.09
PFDN1-204ENST00000512707 UGGT1Q9NYU2 1555 aa15.59■□□□□ 0.09
PFDN1-204ENST00000512707 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
PFDN1-204ENST00000512707 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
PFDN1-204ENST00000512707 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
PFDN1-204ENST00000512707 IDI1Q13907 227 aa15.57■□□□□ 0.08
PFDN1-204ENST00000512707 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
PFDN1-204ENST00000512707 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
PFDN1-204ENST00000512707 UHRF1BP1Q6BDS2 1440 aa15.57■□□□□ 0.08
PFDN1-204ENST00000512707 SPATA31E1Q6ZUB1 1445 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms