RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 SHANK2Q9UPX8 1470 aa25.43■■□□□ 1.66
SERF1A-207ENST00000512649 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
SERF1A-207ENST00000512649 DMRT2Q9Y5R5 561 aa25.42■■□□□ 1.66
SERF1A-207ENST00000512649 DUOX2Q9NRD8 1548 aa25.42■■□□□ 1.66
SERF1A-207ENST00000512649 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
SERF1A-207ENST00000512649 DNMT1P26358 1616 aaKnown RBP25.41■■□□□ 1.66
SERF1A-207ENST00000512649 KDM5DQ9BY66 1539 aa25.4■■□□□ 1.66
SERF1A-207ENST00000512649 ANKRD30AQ9BXX3 1397 aa25.4■■□□□ 1.66
SERF1A-207ENST00000512649 FAM135AQ9P2D6 1515 aa25.38■■□□□ 1.65
SERF1A-207ENST00000512649 CROCC2H7BZ55 1655 aa25.38■■□□□ 1.65
SERF1A-207ENST00000512649 FBXO31Q5XUX0 539 aaPredicted RBP25.36■■□□□ 1.65
SERF1A-207ENST00000512649 EIF2AK4Q9P2K8 1649 aaKnown RBP25.35■■□□□ 1.65
SERF1A-207ENST00000512649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.65
SERF1A-207ENST00000512649 ERBINQ96RT1 1412 aa25.33■■□□□ 1.65
SERF1A-207ENST00000512649 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
SERF1A-207ENST00000512649 PZPP20742 1482 aa25.32■■□□□ 1.64
SERF1A-207ENST00000512649 TNRQ92752 1358 aa25.31■■□□□ 1.64
SERF1A-207ENST00000512649 NCOA1Q15788 1441 aa25.3■■□□□ 1.64
SERF1A-207ENST00000512649 ILDR1Q86SU0 546 aaPredicted RBP25.29■■□□□ 1.64
SERF1A-207ENST00000512649 KANK1Q14678 1352 aa25.28■■□□□ 1.64
SERF1A-207ENST00000512649 ABCC3O15438 1527 aa25.27■■□□□ 1.64
SERF1A-207ENST00000512649 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
SERF1A-207ENST00000512649 CAMSAP1Q5T5Y3 1602 aa25.26■■□□□ 1.63
SERF1A-207ENST00000512649 STRCQ7RTU9 1775 aa25.26■■□□□ 1.63
SERF1A-207ENST00000512649 ITGAEP38570 1179 aa25.26■■□□□ 1.63
SERF1A-207ENST00000512649 CEP170BQ9Y4F5 1589 aaPredicted RBP25.25■■□□□ 1.63
SERF1A-207ENST00000512649 ZC3H13Q5T200 1668 aaKnown RBP25.25■■□□□ 1.63
SERF1A-207ENST00000512649 NCKAP5LQ9HCH0 1330 aa25.24■■□□□ 1.63
SERF1A-207ENST00000512649 A2ML1A8K2U0 1454 aa25.23■■□□□ 1.63
SERF1A-207ENST00000512649 ADGRL2O95490 1459 aa25.23■■□□□ 1.63
SERF1A-207ENST00000512649 PKD2Q13563 968 aa25.23■■□□□ 1.63
SERF1A-207ENST00000512649 PTPRTO14522 1441 aa25.21■■□□□ 1.63
SERF1A-207ENST00000512649 MROH1Q8NDA8 1641 aa25.21■■□□□ 1.63
SERF1A-207ENST00000512649 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.63
SERF1A-207ENST00000512649 THEMISQ8N1K5 641 aaPredicted RBP25.19■■□□□ 1.62
SERF1A-207ENST00000512649 ANKRD50Q9ULJ7 1429 aa25.19■■□□□ 1.62
SERF1A-207ENST00000512649 CEP152O94986 1710 aa25.18■■□□□ 1.62
SERF1A-207ENST00000512649 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
SERF1A-207ENST00000512649 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
SERF1A-207ENST00000512649 CERKQ8TCT0 537 aa25.17■■□□□ 1.62
SERF1A-207ENST00000512649 FBXO41Q8TF61 875 aa25.17■■□□□ 1.62
SERF1A-207ENST00000512649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
SERF1A-207ENST00000512649 PLA2R1Q13018 1463 aa25.16■■□□□ 1.62
SERF1A-207ENST00000512649 CFAP65Q6ZU64 1925 aaKnown RBP25.15■■□□□ 1.62
SERF1A-207ENST00000512649 ERVK-7P63135 1459 aa25.15■■□□□ 1.62
SERF1A-207ENST00000512649 ROCK1Q13464 1354 aa25.14■■□□□ 1.61
SERF1A-207ENST00000512649 ARHGAP31Q2M1Z3 1444 aa25.13■■□□□ 1.61
SERF1A-207ENST00000512649 DEPDC5O75140 1603 aa25.13■■□□□ 1.61
SERF1A-207ENST00000512649 ANKLE2Q86XL3 938 aa25.13■■□□□ 1.61
SERF1A-207ENST00000512649 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
SERF1A-207ENST00000512649 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
SERF1A-207ENST00000512649 STAG3Q9UJ98 1225 aa25.07■■□□□ 1.6
SERF1A-207ENST00000512649 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
SERF1A-207ENST00000512649 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
SERF1A-207ENST00000512649 VWDEQ8N2E2 1590 aa25.04■■□□□ 1.6
SERF1A-207ENST00000512649 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
SERF1A-207ENST00000512649 IDI1Q13907 227 aa24.98■■□□□ 1.59
SERF1A-207ENST00000512649 EFCAB6Q5THR3 1501 aa24.97■■□□□ 1.59
SERF1A-207ENST00000512649 NUP155O75694 1391 aa24.97■■□□□ 1.59
SERF1A-207ENST00000512649 SLC52A1Q9NWF4 448 aa24.97■■□□□ 1.59
SERF1A-207ENST00000512649 EID1Q9Y6B2 187 aa24.97■■□□□ 1.59
SERF1A-207ENST00000512649 POLR1AO95602 1720 aaPredicted RBP24.97■■□□□ 1.59
SERF1A-207ENST00000512649 TXNDC2Q86VQ3 553 aa24.95■■□□□ 1.58
SERF1A-207ENST00000512649 NPHP4O75161 1426 aaPredicted RBP24.95■■□□□ 1.58
SERF1A-207ENST00000512649 RPRD2Q5VT52 1461 aaKnown RBP24.94■■□□□ 1.58
SERF1A-207ENST00000512649 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
SERF1A-207ENST00000512649 UNC13BO14795 1591 aa24.93■■□□□ 1.58
SERF1A-207ENST00000512649 UBR1Q8IWV7 1749 aa24.93■■□□□ 1.58
SERF1A-207ENST00000512649 NOS1P29475 1434 aa24.93■■□□□ 1.58
SERF1A-207ENST00000512649 NEURL4Q96JN8 1562 aa24.92■■□□□ 1.58
SERF1A-207ENST00000512649 TET3O43151 1660 aa24.91■■□□□ 1.58
SERF1A-207ENST00000512649 MED14O60244 1454 aa24.9■■□□□ 1.58
SERF1A-207ENST00000512649 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
SERF1A-207ENST00000512649 LTKP29376 864 aa24.89■■□□□ 1.58
SERF1A-207ENST00000512649 TMEM2Q9UHN6 1383 aa24.87■■□□□ 1.57
SERF1A-207ENST00000512649 SCAF11Q99590 1463 aaKnown RBP24.87■■□□□ 1.57
SERF1A-207ENST00000512649 SYNMO15061 1565 aa24.87■■□□□ 1.57
SERF1A-207ENST00000512649 GCC2Q8IWJ2 1684 aa24.87■■□□□ 1.57
SERF1A-207ENST00000512649 CHGAP10645 457 aaKnown RBP24.86■■□□□ 1.57
SERF1A-207ENST00000512649 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
SERF1A-207ENST00000512649 SLIT1O75093 1534 aa24.85■■□□□ 1.57
SERF1A-207ENST00000512649 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
SERF1A-207ENST00000512649 IQSEC2Q5JU85 1478 aa24.84■■□□□ 1.57
SERF1A-207ENST00000512649 ARHGAP23Q9P227 1491 aa24.84■■□□□ 1.57
SERF1A-207ENST00000512649 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
SERF1A-207ENST00000512649 NAIPQ13075 1403 aa24.84■■□□□ 1.57
SERF1A-207ENST00000512649 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
SERF1A-207ENST00000512649 BCANQ96GW7 911 aa24.82■■□□□ 1.56
SERF1A-207ENST00000512649 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
SERF1A-207ENST00000512649 E9PCH4 1651 aa24.8■■□□□ 1.56
SERF1A-207ENST00000512649 UBAP1LF5GYI3 381 aa24.79■■□□□ 1.56
SERF1A-207ENST00000512649 ADGRB3O60242 1522 aa24.79■■□□□ 1.56
SERF1A-207ENST00000512649 CPS1P31327 1500 aa24.78■■□□□ 1.56
SERF1A-207ENST00000512649 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
SERF1A-207ENST00000512649 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
SERF1A-207ENST00000512649 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
SERF1A-207ENST00000512649 SLC26A8Q96RN1 970 aa24.72■■□□□ 1.55
SERF1A-207ENST00000512649 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
SERF1A-207ENST00000512649 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
SERF1A-207ENST00000512649 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms