RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 LMTK3Q96Q04 1460 aa24.38■■□□□ 1.49
DDX41-214ENST00000512334 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
DDX41-214ENST00000512334 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
DDX41-214ENST00000512334 RNF17Q9BXT8 1623 aaKnown RBP24.35■■□□□ 1.49
DDX41-214ENST00000512334 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
DDX41-214ENST00000512334 ERBINQ96RT1 1412 aa24.35■■□□□ 1.49
DDX41-214ENST00000512334 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
DDX41-214ENST00000512334 ITGAEP38570 1179 aa24.33■■□□□ 1.49
DDX41-214ENST00000512334 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.48
DDX41-214ENST00000512334 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
DDX41-214ENST00000512334 FAM135AQ9P2D6 1515 aa24.32■■□□□ 1.48
DDX41-214ENST00000512334 HSPA2P54652 639 aa24.32■■□□□ 1.48
DDX41-214ENST00000512334 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
DDX41-214ENST00000512334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
DDX41-214ENST00000512334 NPATQ14207 1427 aa24.29■■□□□ 1.48
DDX41-214ENST00000512334 PTPRKQ15262 1439 aa24.29■■□□□ 1.48
DDX41-214ENST00000512334 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
DDX41-214ENST00000512334 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
DDX41-214ENST00000512334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■□□□ 12.9
DDX41-214ENST00000512334 ZC3H13Q5T200 1668 aaKnown RBP24.25■■□□□ 1.47
DDX41-214ENST00000512334 ABCC3O15438 1527 aa24.25■■□□□ 1.47
DDX41-214ENST00000512334 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
DDX41-214ENST00000512334 CEP152O94986 1710 aa24.23■■□□□ 1.47
DDX41-214ENST00000512334 PRDM15P57071 1507 aaPredicted RBP24.22■■□□□ 1.47
DDX41-214ENST00000512334 PZPP20742 1482 aa24.22■■□□□ 1.47
DDX41-214ENST00000512334 ROCK1Q13464 1354 aa24.21■■□□□ 1.47
DDX41-214ENST00000512334 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
DDX41-214ENST00000512334 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
DDX41-214ENST00000512334 KANK1Q14678 1352 aa24.2■■□□□ 1.46
DDX41-214ENST00000512334 MYO3AQ8NEV4 1616 aa24.19■■□□□ 1.46
DDX41-214ENST00000512334 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
DDX41-214ENST00000512334 TNRQ92752 1358 aa24.16■■□□□ 1.46
DDX41-214ENST00000512334 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
DDX41-214ENST00000512334 ZNF142P52746 1687 aaPredicted RBP24.12■■□□□ 1.45
DDX41-214ENST00000512334 CFAP65Q6ZU64 1925 aaKnown RBP24.11■■□□□ 1.45
DDX41-214ENST00000512334 VWDEQ8N2E2 1590 aa24.09■■□□□ 1.45
DDX41-214ENST00000512334 A2ML1A8K2U0 1454 aa24.09■■□□□ 1.45
DDX41-214ENST00000512334 ERVK-7P63135 1459 aa24.09■■□□□ 1.45
DDX41-214ENST00000512334 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.45
DDX41-214ENST00000512334 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
DDX41-214ENST00000512334 SPATA31D1Q6ZQQ2 1576 aa24.08■■□□□ 1.44
DDX41-214ENST00000512334 STRCQ7RTU9 1775 aa24.06■■□□□ 1.44
DDX41-214ENST00000512334 NLRP1Q9C000 1473 aa24.06■■□□□ 1.44
DDX41-214ENST00000512334 UNC13BO14795 1591 aa24.05■■□□□ 1.44
DDX41-214ENST00000512334 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
DDX41-214ENST00000512334 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
DDX41-214ENST00000512334 NAIPQ13075 1403 aa24■■□□□ 1.43
DDX41-214ENST00000512334 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 NUP155O75694 1391 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 PLA2R1Q13018 1463 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 TET3O43151 1660 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
DDX41-214ENST00000512334 IQGAP3Q86VI3 1631 aa23.96■■□□□ 1.43
DDX41-214ENST00000512334 THEMISQ8N1K5 641 aaPredicted RBP23.96■■□□□ 1.43
DDX41-214ENST00000512334 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
DDX41-214ENST00000512334 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
DDX41-214ENST00000512334 PKD2Q13563 968 aa23.94■■□□□ 1.42
DDX41-214ENST00000512334 PTPRTO14522 1441 aa23.93■■□□□ 1.42
DDX41-214ENST00000512334 NOS1P29475 1434 aa23.92■■□□□ 1.42
DDX41-214ENST00000512334 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
DDX41-214ENST00000512334 SYNMO15061 1565 aa23.91■■□□□ 1.42
DDX41-214ENST00000512334 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
DDX41-214ENST00000512334 E9PCH4 1651 aa23.89■■□□□ 1.42
DDX41-214ENST00000512334 PIK3C2BO00750 1634 aa23.89■■□□□ 1.42
DDX41-214ENST00000512334 ANKLE2Q86XL3 938 aa23.89■■□□□ 1.41
DDX41-214ENST00000512334 POLR1AO95602 1720 aaPredicted RBP23.88■■□□□ 1.41
DDX41-214ENST00000512334 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
DDX41-214ENST00000512334 IDI1Q13907 227 aa23.87■■□□□ 1.41
DDX41-214ENST00000512334 SLC52A1Q9NWF4 448 aa23.86■■□□□ 1.41
DDX41-214ENST00000512334 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
DDX41-214ENST00000512334 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
DDX41-214ENST00000512334 ADGRB3O60242 1522 aa23.79■■□□□ 1.4
DDX41-214ENST00000512334 NPHP4O75161 1426 aaPredicted RBP23.78■■□□□ 1.4
DDX41-214ENST00000512334 EID1Q9Y6B2 187 aa23.78■■□□□ 1.4
DDX41-214ENST00000512334 SLIT1O75093 1534 aa23.78■■□□□ 1.4
DDX41-214ENST00000512334 ARHGAP23Q9P227 1491 aa23.77■■□□□ 1.4
DDX41-214ENST00000512334 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
DDX41-214ENST00000512334 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
DDX41-214ENST00000512334 TMEM2Q9UHN6 1383 aa23.77■■□□□ 1.4
DDX41-214ENST00000512334 SCAF11Q99590 1463 aaKnown RBP23.76■■□□□ 1.39
DDX41-214ENST00000512334 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
DDX41-214ENST00000512334 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
DDX41-214ENST00000512334 SPHKAPQ2M3C7 1700 aa23.76■■□□□ 1.39
DDX41-214ENST00000512334 MED14O60244 1454 aa23.75■■□□□ 1.39
DDX41-214ENST00000512334 IQGAP1P46940 1657 aa23.75■■□□□ 1.39
DDX41-214ENST00000512334 ZNF335Q9H4Z2 1342 aaPredicted RBP23.75■■□□□ 1.39
DDX41-214ENST00000512334 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
DDX41-214ENST00000512334 LTKP29376 864 aa23.74■■□□□ 1.39
DDX41-214ENST00000512334 MYO5BQ9ULV0 1848 aa23.72■■□□□ 1.39
DDX41-214ENST00000512334 TMEM131LA2VDJ0 1609 aa23.7■■□□□ 1.39
DDX41-214ENST00000512334 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
DDX41-214ENST00000512334 ILDR1Q86SU0 546 aaPredicted RBP23.68■■□□□ 1.38
DDX41-214ENST00000512334 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
DDX41-214ENST00000512334 TRPM2O94759 1503 aa23.66■■□□□ 1.38
DDX41-214ENST00000512334 RIMS2Q9UQ26 1411 aa23.66■■□□□ 1.38
DDX41-214ENST00000512334 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
DDX41-214ENST00000512334 PPP1R15AO75807 674 aaPredicted RBP23.65■■□□□ 1.38
DDX41-214ENST00000512334 HDGFP51858 240 aaKnown RBP23.65■■□□□ 1.38
DDX41-214ENST00000512334 FBXO41Q8TF61 875 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms