RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
COPB2-208ENST00000512153 WASHC2CQ9Y4E1 1318 aa17.33■□□□□ 0.36
COPB2-208ENST00000512153 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
COPB2-208ENST00000512153 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
COPB2-208ENST00000512153 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
COPB2-208ENST00000512153 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
COPB2-208ENST00000512153 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
COPB2-208ENST00000512153 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
COPB2-208ENST00000512153 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
COPB2-208ENST00000512153 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
COPB2-208ENST00000512153 FYCO1Q9BQS8 1478 aa17.26■□□□□ 0.35
COPB2-208ENST00000512153 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
COPB2-208ENST00000512153 POLR1AO95602 1720 aaPredicted RBP17.26■□□□□ 0.35
COPB2-208ENST00000512153 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
COPB2-208ENST00000512153 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
COPB2-208ENST00000512153 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
COPB2-208ENST00000512153 PZPP20742 1482 aa17.23■□□□□ 0.35
COPB2-208ENST00000512153 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
COPB2-208ENST00000512153 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
COPB2-208ENST00000512153 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
COPB2-208ENST00000512153 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
COPB2-208ENST00000512153 MED14O60244 1454 aa17.2■□□□□ 0.34
COPB2-208ENST00000512153 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
COPB2-208ENST00000512153 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
COPB2-208ENST00000512153 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
COPB2-208ENST00000512153 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
COPB2-208ENST00000512153 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
COPB2-208ENST00000512153 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
COPB2-208ENST00000512153 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
COPB2-208ENST00000512153 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
COPB2-208ENST00000512153 POTEAQ6S8J7 498 aa17.15■□□□□ 0.34
COPB2-208ENST00000512153 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
COPB2-208ENST00000512153 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
COPB2-208ENST00000512153 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
COPB2-208ENST00000512153 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
COPB2-208ENST00000512153 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
COPB2-208ENST00000512153 SYNMO15061 1565 aa17.08■□□□□ 0.32
COPB2-208ENST00000512153 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
COPB2-208ENST00000512153 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
COPB2-208ENST00000512153 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
COPB2-208ENST00000512153 LTKP29376 864 aa17.07■□□□□ 0.32
COPB2-208ENST00000512153 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
COPB2-208ENST00000512153 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
COPB2-208ENST00000512153 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
COPB2-208ENST00000512153 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
COPB2-208ENST00000512153 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
COPB2-208ENST00000512153 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
COPB2-208ENST00000512153 ERVK-7P63135 1459 aa17.02■□□□□ 0.32
COPB2-208ENST00000512153 TMEM94Q12767 1356 aa17.02■□□□□ 0.31
COPB2-208ENST00000512153 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
COPB2-208ENST00000512153 BCANQ96GW7 911 aa17.01■□□□□ 0.31
COPB2-208ENST00000512153 ABCC3O15438 1527 aa17■□□□□ 0.31
COPB2-208ENST00000512153 KCNA6P17658 529 aa16.99■□□□□ 0.31
COPB2-208ENST00000512153 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
COPB2-208ENST00000512153 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
COPB2-208ENST00000512153 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
COPB2-208ENST00000512153 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
COPB2-208ENST00000512153 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
COPB2-208ENST00000512153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
COPB2-208ENST00000512153 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
COPB2-208ENST00000512153 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
COPB2-208ENST00000512153 MSH6P52701 1360 aa16.94■□□□□ 0.3
COPB2-208ENST00000512153 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
COPB2-208ENST00000512153 UBR1Q8IWV7 1749 aa16.94■□□□□ 0.3
COPB2-208ENST00000512153 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
COPB2-208ENST00000512153 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
COPB2-208ENST00000512153 JCADQ9P266 1359 aa16.93■□□□□ 0.3
COPB2-208ENST00000512153 SLIT1O75093 1534 aa16.93■□□□□ 0.3
COPB2-208ENST00000512153 ZNF772Q68DY9 489 aaPredicted RBP16.93■□□□□ 0.3
COPB2-208ENST00000512153 ARHGEF5Q12774 1597 aa16.92■□□□□ 0.3
COPB2-208ENST00000512153 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
COPB2-208ENST00000512153 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
COPB2-208ENST00000512153 LRRC9Q6ZRR7 1453 aa16.9■□□□□ 0.3
COPB2-208ENST00000512153 SETD1AO15047 1707 aaKnown RBP16.9■□□□□ 0.3
COPB2-208ENST00000512153 IDI1Q13907 227 aa16.89■□□□□ 0.29
COPB2-208ENST00000512153 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
COPB2-208ENST00000512153 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
COPB2-208ENST00000512153 KANK1Q14678 1352 aa16.88■□□□□ 0.29
COPB2-208ENST00000512153 RXRBP28702 533 aa16.87■□□□□ 0.29
COPB2-208ENST00000512153 CEP152O94986 1710 aa16.87■□□□□ 0.29
COPB2-208ENST00000512153 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
COPB2-208ENST00000512153 EIF2AK4Q9P2K8 1649 aaKnown RBP16.86■□□□□ 0.29
COPB2-208ENST00000512153 SPATA31A6Q5VVP1 1343 aa16.86■□□□□ 0.29
COPB2-208ENST00000512153 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
COPB2-208ENST00000512153 PRDM15P57071 1507 aaPredicted RBP16.84■□□□□ 0.29
COPB2-208ENST00000512153 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
COPB2-208ENST00000512153 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
COPB2-208ENST00000512153 EFCAB6Q5THR3 1501 aa16.83■□□□□ 0.28
COPB2-208ENST00000512153 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
COPB2-208ENST00000512153 MAST1Q9Y2H9 1570 aa16.83■□□□□ 0.28
COPB2-208ENST00000512153 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
COPB2-208ENST00000512153 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
COPB2-208ENST00000512153 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
COPB2-208ENST00000512153 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
COPB2-208ENST00000512153 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
COPB2-208ENST00000512153 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
COPB2-208ENST00000512153 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
COPB2-208ENST00000512153 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
COPB2-208ENST00000512153 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
COPB2-208ENST00000512153 ATF3P18847 181 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms