RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ADGBQ8N7X0 1667 aa13.14□□□□□ -0.31
DEPDC1B-205ENST00000512078 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
DEPDC1B-205ENST00000512078 TNRQ92752 1358 aa13.13□□□□□ -0.31
DEPDC1B-205ENST00000512078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
DEPDC1B-205ENST00000512078 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
DEPDC1B-205ENST00000512078 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
DEPDC1B-205ENST00000512078 GGT6Q6P531 493 aa13.11□□□□□ -0.31
DEPDC1B-205ENST00000512078 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
DEPDC1B-205ENST00000512078 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
DEPDC1B-205ENST00000512078 ATP1B4Q9UN42 357 aaPredicted RBP13.11□□□□□ -0.31
DEPDC1B-205ENST00000512078 PZPP20742 1482 aa13.1□□□□□ -0.31
DEPDC1B-205ENST00000512078 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
DEPDC1B-205ENST00000512078 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
DEPDC1B-205ENST00000512078 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
DEPDC1B-205ENST00000512078 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
DEPDC1B-205ENST00000512078 ROBO1Q9Y6N7 1651 aa13.07□□□□□ -0.32
DEPDC1B-205ENST00000512078 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
DEPDC1B-205ENST00000512078 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
DEPDC1B-205ENST00000512078 EEA1Q15075 1411 aa13.04□□□□□ -0.32
DEPDC1B-205ENST00000512078 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
DEPDC1B-205ENST00000512078 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
DEPDC1B-205ENST00000512078 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
DEPDC1B-205ENST00000512078 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
DEPDC1B-205ENST00000512078 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.32
DEPDC1B-205ENST00000512078 HNRNPMP52272 730 aaKnown RBP eCLIP13.02□□□□□ -0.335e-7■■■■□ 25.4
DEPDC1B-205ENST00000512078 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
DEPDC1B-205ENST00000512078 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
DEPDC1B-205ENST00000512078 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
DEPDC1B-205ENST00000512078 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
DEPDC1B-205ENST00000512078 LRRC9Q6ZRR7 1453 aa12.99□□□□□ -0.33
DEPDC1B-205ENST00000512078 UBR1Q8IWV7 1749 aa12.98□□□□□ -0.33
DEPDC1B-205ENST00000512078 JCADQ9P266 1359 aa12.97□□□□□ -0.33
DEPDC1B-205ENST00000512078 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
DEPDC1B-205ENST00000512078 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
DEPDC1B-205ENST00000512078 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
DEPDC1B-205ENST00000512078 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
DEPDC1B-205ENST00000512078 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
DEPDC1B-205ENST00000512078 RTEL1-TNFRSF6BF6WH68 1400 aa12.95□□□□□ -0.34
DEPDC1B-205ENST00000512078 LRP6O75581 1613 aa12.94□□□□□ -0.34
DEPDC1B-205ENST00000512078 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1B-205ENST00000512078 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1B-205ENST00000512078 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
DEPDC1B-205ENST00000512078 SLIT1O75093 1534 aa12.93□□□□□ -0.34
DEPDC1B-205ENST00000512078 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
DEPDC1B-205ENST00000512078 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
DEPDC1B-205ENST00000512078 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
DEPDC1B-205ENST00000512078 KIF3BO15066 747 aa12.91□□□□□ -0.34
DEPDC1B-205ENST00000512078 SHPRHQ149N8 1683 aa12.91□□□□□ -0.34
DEPDC1B-205ENST00000512078 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
DEPDC1B-205ENST00000512078 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 TIAM1Q13009 1591 aa12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 ERVK-7P63135 1459 aa12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
DEPDC1B-205ENST00000512078 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
DEPDC1B-205ENST00000512078 RXRBP28702 533 aa12.89□□□□□ -0.35
DEPDC1B-205ENST00000512078 ABCC3O15438 1527 aa12.87□□□□□ -0.35
DEPDC1B-205ENST00000512078 PRDM15P57071 1507 aaPredicted RBP12.87□□□□□ -0.35
DEPDC1B-205ENST00000512078 LTKP29376 864 aa12.87□□□□□ -0.35
DEPDC1B-205ENST00000512078 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
DEPDC1B-205ENST00000512078 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
DEPDC1B-205ENST00000512078 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
DEPDC1B-205ENST00000512078 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
DEPDC1B-205ENST00000512078 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
DEPDC1B-205ENST00000512078 TXNDC2Q86VQ3 553 aa12.85□□□□□ -0.35
DEPDC1B-205ENST00000512078 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
DEPDC1B-205ENST00000512078 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
DEPDC1B-205ENST00000512078 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
DEPDC1B-205ENST00000512078 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
DEPDC1B-205ENST00000512078 RGS12O14924 1447 aa12.83□□□□□ -0.35
DEPDC1B-205ENST00000512078 CEP152O94986 1710 aa12.83□□□□□ -0.35
DEPDC1B-205ENST00000512078 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
DEPDC1B-205ENST00000512078 KCNA6P17658 529 aa12.83□□□□□ -0.36
DEPDC1B-205ENST00000512078 MSH6P52701 1360 aa12.83□□□□□ -0.36
DEPDC1B-205ENST00000512078 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
DEPDC1B-205ENST00000512078 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
DEPDC1B-205ENST00000512078 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
DEPDC1B-205ENST00000512078 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
DEPDC1B-205ENST00000512078 TET3O43151 1660 aa12.81□□□□□ -0.36
DEPDC1B-205ENST00000512078 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
DEPDC1B-205ENST00000512078 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
DEPDC1B-205ENST00000512078 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
DEPDC1B-205ENST00000512078 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
DEPDC1B-205ENST00000512078 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
DEPDC1B-205ENST00000512078 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
DEPDC1B-205ENST00000512078 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
DEPDC1B-205ENST00000512078 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
DEPDC1B-205ENST00000512078 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
DEPDC1B-205ENST00000512078 AFF2P51816 1311 aa12.77□□□□□ -0.37
DEPDC1B-205ENST00000512078 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
DEPDC1B-205ENST00000512078 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
DEPDC1B-205ENST00000512078 LRP5O75197 1615 aa12.75□□□□□ -0.37
DEPDC1B-205ENST00000512078 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
DEPDC1B-205ENST00000512078 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
DEPDC1B-205ENST00000512078 NUTM2BA6NNL0 878 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 NUTM2EB1AL46 878 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 ARHGAP31Q2M1Z3 1444 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms