RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 ABCC1P33527 1531 aa11.7□□□□□ -0.54
HMGCR-211ENST00000512053 ILDR2Q71H61 639 aa11.69□□□□□ -0.54
HMGCR-211ENST00000512053 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
HMGCR-211ENST00000512053 NPATQ14207 1427 aa11.69□□□□□ -0.54
HMGCR-211ENST00000512053 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
HMGCR-211ENST00000512053 PKD2Q13563 968 aa11.68□□□□□ -0.54
HMGCR-211ENST00000512053 GGT6Q6P531 493 aa11.68□□□□□ -0.54
HMGCR-211ENST00000512053 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
HMGCR-211ENST00000512053 STRCQ7RTU9 1775 aa11.67□□□□□ -0.54
HMGCR-211ENST00000512053 NCKAP5LQ9HCH0 1330 aa11.67□□□□□ -0.54
HMGCR-211ENST00000512053 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
HMGCR-211ENST00000512053 PREX2Q70Z35 1606 aa11.67□□□□□ -0.54
HMGCR-211ENST00000512053 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
HMGCR-211ENST00000512053 C3P01024 1663 aa11.66□□□□□ -0.54
HMGCR-211ENST00000512053 CDC42BPBQ9Y5S2 1711 aa11.66□□□□□ -0.54
HMGCR-211ENST00000512053 IQSEC2Q5JU85 1478 aa11.65□□□□□ -0.54
HMGCR-211ENST00000512053 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
HMGCR-211ENST00000512053 UBAP1LF5GYI3 381 aa11.65□□□□□ -0.54
HMGCR-211ENST00000512053 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.55
HMGCR-211ENST00000512053 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
HMGCR-211ENST00000512053 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
HMGCR-211ENST00000512053 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
HMGCR-211ENST00000512053 CAMSAP1Q5T5Y3 1602 aa11.64□□□□□ -0.55
HMGCR-211ENST00000512053 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
HMGCR-211ENST00000512053 SAMD9LQ8IVG5 1584 aa11.63□□□□□ -0.55
HMGCR-211ENST00000512053 KIAA1107Q9UPP5 1409 aa11.63□□□□□ -0.55
HMGCR-211ENST00000512053 GPATCH8Q9UKJ3 1502 aaKnown RBP11.63□□□□□ -0.55
HMGCR-211ENST00000512053 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
HMGCR-211ENST00000512053 A2MP01023 1474 aa11.63□□□□□ -0.55
HMGCR-211ENST00000512053 KIDINS220Q9ULH0 1771 aa11.62□□□□□ -0.55
HMGCR-211ENST00000512053 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
HMGCR-211ENST00000512053 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
HMGCR-211ENST00000512053 GABBR2O75899 941 aa11.62□□□□□ -0.55
HMGCR-211ENST00000512053 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
HMGCR-211ENST00000512053 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
HMGCR-211ENST00000512053 SPATA31D1Q6ZQQ2 1576 aa11.6□□□□□ -0.55
HMGCR-211ENST00000512053 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
HMGCR-211ENST00000512053 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
HMGCR-211ENST00000512053 MROH2AA6NES4 1674 aa11.59□□□□□ -0.55
HMGCR-211ENST00000512053 CDC42BPAQ5VT25 1732 aa11.58□□□□□ -0.56
HMGCR-211ENST00000512053 KIF3BO15066 747 aa11.57□□□□□ -0.56
HMGCR-211ENST00000512053 TOM1O60784 492 aa11.57□□□□□ -0.56
HMGCR-211ENST00000512053 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
HMGCR-211ENST00000512053 ZNF692Q9BU19 519 aaPredicted RBP11.57□□□□□ -0.56
HMGCR-211ENST00000512053 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
HMGCR-211ENST00000512053 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
HMGCR-211ENST00000512053 PIP4K2BP78356 416 aa11.56□□□□□ -0.56
HMGCR-211ENST00000512053 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
HMGCR-211ENST00000512053 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
HMGCR-211ENST00000512053 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
HMGCR-211ENST00000512053 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
HMGCR-211ENST00000512053 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
HMGCR-211ENST00000512053 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
HMGCR-211ENST00000512053 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-211ENST00000512053 TSPY4P0CV99 314 aa11.54□□□□□ -0.56
HMGCR-211ENST00000512053 TSPY10P0CW01 314 aa11.54□□□□□ -0.56
HMGCR-211ENST00000512053 A2ML1A8K2U0 1454 aa11.54□□□□□ -0.56
HMGCR-211ENST00000512053 TCOF1Q13428 1488 aaKnown RBP11.54□□□□□ -0.56
HMGCR-211ENST00000512053 PLXNC1O60486 1568 aa11.54□□□□□ -0.56
HMGCR-211ENST00000512053 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-211ENST00000512053 FBXO31Q5XUX0 539 aaPredicted RBP11.53□□□□□ -0.56
HMGCR-211ENST00000512053 LHX8Q68G74 356 aa11.53□□□□□ -0.56
HMGCR-211ENST00000512053 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
HMGCR-211ENST00000512053 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
HMGCR-211ENST00000512053 TNRQ92752 1358 aa11.53□□□□□ -0.56
HMGCR-211ENST00000512053 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
HMGCR-211ENST00000512053 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-211ENST00000512053 ADGBQ8N7X0 1667 aa11.5□□□□□ -0.57
HMGCR-211ENST00000512053 HSPA1LP34931 641 aa11.5□□□□□ -0.57
HMGCR-211ENST00000512053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
HMGCR-211ENST00000512053 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
HMGCR-211ENST00000512053 CPS1P31327 1500 aa11.49□□□□□ -0.57
HMGCR-211ENST00000512053 EHBP1L1Q8N3D4 1523 aa11.49□□□□□ -0.57
HMGCR-211ENST00000512053 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
HMGCR-211ENST00000512053 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
HMGCR-211ENST00000512053 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
HMGCR-211ENST00000512053 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
HMGCR-211ENST00000512053 FAM135AQ9P2D6 1515 aa11.47□□□□□ -0.57
HMGCR-211ENST00000512053 PZPP20742 1482 aa11.47□□□□□ -0.57
HMGCR-211ENST00000512053 SHANK2Q9UPX8 1470 aa11.47□□□□□ -0.57
HMGCR-211ENST00000512053 KDM5DQ9BY66 1539 aa11.46□□□□□ -0.57
HMGCR-211ENST00000512053 NLRP1Q9C000 1473 aa11.45□□□□□ -0.58
HMGCR-211ENST00000512053 NPHP4O75161 1426 aaPredicted RBP11.44□□□□□ -0.58
HMGCR-211ENST00000512053 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
HMGCR-211ENST00000512053 UGGT1Q9NYU2 1555 aa11.44□□□□□ -0.58
HMGCR-211ENST00000512053 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
HMGCR-211ENST00000512053 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
HMGCR-211ENST00000512053 MED14O60244 1454 aa11.4□□□□□ -0.58
HMGCR-211ENST00000512053 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
HMGCR-211ENST00000512053 EID1Q9Y6B2 187 aa11.4□□□□□ -0.58
HMGCR-211ENST00000512053 MED1Q15648 1581 aaPredicted RBP11.39□□□□□ -0.59
HMGCR-211ENST00000512053 NEURL4Q96JN8 1562 aa11.39□□□□□ -0.59
HMGCR-211ENST00000512053 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
HMGCR-211ENST00000512053 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
HMGCR-211ENST00000512053 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-211ENST00000512053 ARHGEF5Q12774 1597 aa11.37□□□□□ -0.59
HMGCR-211ENST00000512053 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
HMGCR-211ENST00000512053 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
HMGCR-211ENST00000512053 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
HMGCR-211ENST00000512053 ERVK-7P63135 1459 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms