RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 MBD5Q9P267 1494 aa9.28□□□□□ -0.92
RNF4-217ENST00000511892 PLXNC1O60486 1568 aa9.28□□□□□ -0.92
RNF4-217ENST00000511892 SPAG9O60271 1321 aaKnown RBP9.28□□□□□ -0.92
RNF4-217ENST00000511892 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
RNF4-217ENST00000511892 CEBPAP49715 358 aaPredicted RBP9.26□□□□□ -0.93
RNF4-217ENST00000511892 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
RNF4-217ENST00000511892 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
RNF4-217ENST00000511892 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
RNF4-217ENST00000511892 KANK4Q5T7N3 995 aaPredicted RBP9.25□□□□□ -0.93
RNF4-217ENST00000511892 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
RNF4-217ENST00000511892 A2MP01023 1474 aa9.25□□□□□ -0.93
RNF4-217ENST00000511892 ZBTB22O15209 634 aa9.24□□□□□ -0.93
RNF4-217ENST00000511892 HSPA2P54652 639 aa9.24□□□□□ -0.93
RNF4-217ENST00000511892 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
RNF4-217ENST00000511892 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
RNF4-217ENST00000511892 REM2Q8IYK8 340 aaPredicted RBP9.23□□□□□ -0.93
RNF4-217ENST00000511892 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
RNF4-217ENST00000511892 RTEL1-TNFRSF6BF6WH68 1400 aa9.22□□□□□ -0.93
RNF4-217ENST00000511892 CCDC141Q6ZP82 1450 aa9.22□□□□□ -0.93
RNF4-217ENST00000511892 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
RNF4-217ENST00000511892 ILDR1Q86SU0 546 aaPredicted RBP9.2□□□□□ -0.94
RNF4-217ENST00000511892 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
RNF4-217ENST00000511892 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
RNF4-217ENST00000511892 ESF1Q9H501 851 aaKnown RBP9.19□□□□□ -0.94
RNF4-217ENST00000511892 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
RNF4-217ENST00000511892 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
RNF4-217ENST00000511892 MYOM3Q5VTT5 1437 aa9.19□□□□□ -0.94
RNF4-217ENST00000511892 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
RNF4-217ENST00000511892 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
RNF4-217ENST00000511892 MIA2Q96PC5 1412 aa9.18□□□□□ -0.94
RNF4-217ENST00000511892 PTPN23Q9H3S7 1636 aa9.17□□□□□ -0.94
RNF4-217ENST00000511892 GGT6Q6P531 493 aa9.17□□□□□ -0.94
RNF4-217ENST00000511892 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
RNF4-217ENST00000511892 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
RNF4-217ENST00000511892 ZNF142P52746 1687 aaPredicted RBP9.16□□□□□ -0.94
RNF4-217ENST00000511892 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
RNF4-217ENST00000511892 NPATQ14207 1427 aa9.16□□□□□ -0.94
RNF4-217ENST00000511892 RNF17Q9BXT8 1623 aaKnown RBP9.16□□□□□ -0.94
RNF4-217ENST00000511892 PTPRKQ15262 1439 aa9.15□□□□□ -0.94
RNF4-217ENST00000511892 TSPY4P0CV99 314 aa9.15□□□□□ -0.94
RNF4-217ENST00000511892 TSPY10P0CW01 314 aa9.15□□□□□ -0.94
RNF4-217ENST00000511892 EIF2AK4Q9P2K8 1649 aaKnown RBP9.15□□□□□ -0.94
RNF4-217ENST00000511892 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
RNF4-217ENST00000511892 KIF3BO15066 747 aa9.14□□□□□ -0.95
RNF4-217ENST00000511892 CEP152O94986 1710 aa9.14□□□□□ -0.95
RNF4-217ENST00000511892 DNMT1P26358 1616 aaKnown RBP9.13□□□□□ -0.95
RNF4-217ENST00000511892 CAMSAP1Q5T5Y3 1602 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
RNF4-217ENST00000511892 KDM5DQ9BY66 1539 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 FAM135AQ9P2D6 1515 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 TCOF1Q13428 1488 aaKnown RBP9.13□□□□□ -0.95
RNF4-217ENST00000511892 ABCC5O15440 1437 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 FGD6Q6ZV73 1430 aa9.13□□□□□ -0.95
RNF4-217ENST00000511892 CEP170BQ9Y4F5 1589 aaPredicted RBP9.12□□□□□ -0.95
RNF4-217ENST00000511892 HAX1O00165 279 aa9.12□□□□□ -0.95
RNF4-217ENST00000511892 ZC3H13Q5T200 1668 aaKnown RBP9.12□□□□□ -0.95
RNF4-217ENST00000511892 NCOA1Q15788 1441 aa9.12□□□□□ -0.95
RNF4-217ENST00000511892 PZPP20742 1482 aa9.11□□□□□ -0.95
RNF4-217ENST00000511892 SHANK2Q9UPX8 1470 aa9.11□□□□□ -0.95
RNF4-217ENST00000511892 DAPK1P53355 1430 aa9.11□□□□□ -0.95
RNF4-217ENST00000511892 ABCC3O15438 1527 aa9.1□□□□□ -0.95
RNF4-217ENST00000511892 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
RNF4-217ENST00000511892 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
RNF4-217ENST00000511892 PTPRTO14522 1441 aa9.1□□□□□ -0.95
RNF4-217ENST00000511892 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
RNF4-217ENST00000511892 WASHC2CQ9Y4E1 1318 aa9.09□□□□□ -0.95
RNF4-217ENST00000511892 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
RNF4-217ENST00000511892 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
RNF4-217ENST00000511892 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
RNF4-217ENST00000511892 LTBP4Q8N2S1 1624 aa9.08□□□□□ -0.96
RNF4-217ENST00000511892 KIF15Q9NS87 1388 aa9.08□□□□□ -0.96
RNF4-217ENST00000511892 PLA2R1Q13018 1463 aa9.08□□□□□ -0.96
RNF4-217ENST00000511892 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
RNF4-217ENST00000511892 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
RNF4-217ENST00000511892 CERKQ8TCT0 537 aa9.07□□□□□ -0.96
RNF4-217ENST00000511892 RRP7BPQ9NSQ0 103 aa9.07□□□□□ -0.96
RNF4-217ENST00000511892 TNRQ92752 1358 aa9.07□□□□□ -0.96
RNF4-217ENST00000511892 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
RNF4-217ENST00000511892 ERBINQ96RT1 1412 aa9.06□□□□□ -0.96
RNF4-217ENST00000511892 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
RNF4-217ENST00000511892 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
RNF4-217ENST00000511892 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
RNF4-217ENST00000511892 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 ERVK-7P63135 1459 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 NLRP1Q9C000 1473 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 ANKRD30AQ9BXX3 1397 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 PKD2Q13563 968 aa9.04□□□□□ -0.96
RNF4-217ENST00000511892 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
RNF4-217ENST00000511892 UGGT1Q9NYU2 1555 aa9.03□□□□□ -0.96
RNF4-217ENST00000511892 FAM50AQ14320 339 aaKnown RBP9.02□□□□□ -0.97
RNF4-217ENST00000511892 ARHGAP31Q2M1Z3 1444 aa9.02□□□□□ -0.97
RNF4-217ENST00000511892 LMTK2Q8IWU2 1503 aa9.01□□□□□ -0.97
RNF4-217ENST00000511892 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
RNF4-217ENST00000511892 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
RNF4-217ENST00000511892 PIK3C2BO00750 1634 aa9.01□□□□□ -0.97
RNF4-217ENST00000511892 ZNF335Q9H4Z2 1342 aaPredicted RBP9.01□□□□□ -0.97
RNF4-217ENST00000511892 IQGAP1P46940 1657 aa9□□□□□ -0.97
RNF4-217ENST00000511892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms