RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 RNF17Q9BXT8 1623 aaKnown RBP31.72■■■□□ 2.67
CSNK1G3-206ENST00000511130 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
CSNK1G3-206ENST00000511130 RAB3GAP2Q9H2M9 1393 aa31.71■■■□□ 2.67
CSNK1G3-206ENST00000511130 DEPDC5O75140 1603 aa31.68■■■□□ 2.66
CSNK1G3-206ENST00000511130 UNC13BO14795 1591 aa31.64■■■□□ 2.66
CSNK1G3-206ENST00000511130 PRDM15P57071 1507 aaPredicted RBP31.63■■■□□ 2.65
CSNK1G3-206ENST00000511130 ADAMTSL3P82987 1691 aa31.63■■■□□ 2.65
CSNK1G3-206ENST00000511130 TRIM52Q96A61 297 aa31.61■■■□□ 2.65
CSNK1G3-206ENST00000511130 NUP155O75694 1391 aa31.61■■■□□ 2.65
CSNK1G3-206ENST00000511130 KDM4FA0A1W2PPD8 638 aa31.6■■■□□ 2.65
CSNK1G3-206ENST00000511130 MADDQ8WXG6 1647 aa31.59■■■□□ 2.65
CSNK1G3-206ENST00000511130 WASHC2CQ9Y4E1 1318 aa31.59■■■□□ 2.65
CSNK1G3-206ENST00000511130 VWDEQ8N2E2 1590 aa31.58■■■□□ 2.65
CSNK1G3-206ENST00000511130 PPP6R1Q9UPN7 881 aa31.57■■■□□ 2.64
CSNK1G3-206ENST00000511130 KANK1Q14678 1352 aa31.57■■■□□ 2.64
CSNK1G3-206ENST00000511130 ABCC3O15438 1527 aa31.56■■■□□ 2.64
CSNK1G3-206ENST00000511130 FER1L4A9Z1Z3 1794 aa31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 CLTCQ00610 1675 aaKnown RBP31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 CEP152O94986 1710 aa31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 HRCP23327 699 aa31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 ESF1Q9H501 851 aaKnown RBP31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 KDM5DQ9BY66 1539 aa31.55■■■□□ 2.64
CSNK1G3-206ENST00000511130 RIMS1Q86UR5 1692 aaKnown RBP31.52■■■□□ 2.64
CSNK1G3-206ENST00000511130 IQGAP3Q86VI3 1631 aa31.51■■■□□ 2.63
CSNK1G3-206ENST00000511130 FAM135AQ9P2D6 1515 aa31.5■■■□□ 2.63
CSNK1G3-206ENST00000511130 PZPP20742 1482 aa31.49■■■□□ 2.63
CSNK1G3-206ENST00000511130 CNTLNQ9NXG0 1405 aa31.49■■■□□ 2.63
CSNK1G3-206ENST00000511130 LMTK2Q8IWU2 1503 aa31.48■■■□□ 2.63
CSNK1G3-206ENST00000511130 ZC3H13Q5T200 1668 aaKnown RBP31.47■■■□□ 2.63
CSNK1G3-206ENST00000511130 CEBPAP49715 358 aaPredicted RBP31.46■■■□□ 2.63
CSNK1G3-206ENST00000511130 ZMYM3Q14202 1370 aa31.46■■■□□ 2.63
CSNK1G3-206ENST00000511130 PLPPR3Q6T4P5 718 aa31.45■■■□□ 2.63
CSNK1G3-206ENST00000511130 CAMSAP1Q5T5Y3 1602 aa31.44■■■□□ 2.62
CSNK1G3-206ENST00000511130 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
CSNK1G3-206ENST00000511130 SLC4A1APQ9BWU0 796 aaKnown RBP31.43■■■□□ 2.62
CSNK1G3-206ENST00000511130 ACIN1Q9UKV3 1341 aaKnown RBP31.42■■■□□ 2.62
CSNK1G3-206ENST00000511130 MROH2AA6NES4 1674 aa31.41■■■□□ 2.62
CSNK1G3-206ENST00000511130 TET3O43151 1660 aa31.41■■■□□ 2.62
CSNK1G3-206ENST00000511130 PTPRMP28827 1452 aa31.4■■■□□ 2.62
CSNK1G3-206ENST00000511130 EFCAB6Q5THR3 1501 aa31.4■■■□□ 2.62
CSNK1G3-206ENST00000511130 C3P01024 1663 aa31.38■■■□□ 2.61
CSNK1G3-206ENST00000511130 FBXO31Q5XUX0 539 aaPredicted RBP31.38■■■□□ 2.61
CSNK1G3-206ENST00000511130 NPATQ14207 1427 aa31.38■■■□□ 2.61
CSNK1G3-206ENST00000511130 PKD2Q13563 968 aa31.37■■■□□ 2.61
CSNK1G3-206ENST00000511130 ARHGAP31Q2M1Z3 1444 aa31.36■■■□□ 2.61
CSNK1G3-206ENST00000511130 FOXD1Q16676 465 aa31.35■■■□□ 2.61
CSNK1G3-206ENST00000511130 E9PCH4 1651 aa31.35■■■□□ 2.61
CSNK1G3-206ENST00000511130 CFAP65Q6ZU64 1925 aaKnown RBP31.31■■■□□ 2.6
CSNK1G3-206ENST00000511130 ERVK-7P63135 1459 aa31.27■■■□□ 2.6
CSNK1G3-206ENST00000511130 RPRD2Q5VT52 1461 aaKnown RBP31.26■■■□□ 2.59
CSNK1G3-206ENST00000511130 DHX57Q6P158 1386 aaKnown RBP31.26■■■□□ 2.59
CSNK1G3-206ENST00000511130 PREX1Q8TCU6 1659 aa31.25■■■□□ 2.59
CSNK1G3-206ENST00000511130 NOS1P29475 1434 aa31.23■■■□□ 2.59
CSNK1G3-206ENST00000511130 SPATA31D1Q6ZQQ2 1576 aa31.23■■■□□ 2.59
CSNK1G3-206ENST00000511130 PLA2R1Q13018 1463 aa31.2■■■□□ 2.59
CSNK1G3-206ENST00000511130 TNRQ92752 1358 aa31.19■■■□□ 2.58
CSNK1G3-206ENST00000511130 PTPRTO14522 1441 aa31.19■■■□□ 2.58
CSNK1G3-206ENST00000511130 SYNMO15061 1565 aa31.18■■■□□ 2.58
CSNK1G3-206ENST00000511130 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
CSNK1G3-206ENST00000511130 UGGT1Q9NYU2 1555 aa31.14■■■□□ 2.58
CSNK1G3-206ENST00000511130 ANKRD30BQ9BXX2 1392 aa31.12■■■□□ 2.57
CSNK1G3-206ENST00000511130 TRPM2O94759 1503 aa31.1■■■□□ 2.57
CSNK1G3-206ENST00000511130 IDI1Q13907 227 aa31.1■■■□□ 2.57
CSNK1G3-206ENST00000511130 MYO3AQ8NEV4 1616 aa31.07■■■□□ 2.56
CSNK1G3-206ENST00000511130 CLTCL1P53675 1640 aa31.05■■■□□ 2.56
CSNK1G3-206ENST00000511130 SETD1BQ9UPS6 1966 aaKnown RBP31.05■■■□□ 2.56
CSNK1G3-206ENST00000511130 SLC52A1Q9NWF4 448 aa31.05■■■□□ 2.56
CSNK1G3-206ENST00000511130 PIK3C2BO00750 1634 aa31.04■■■□□ 2.56
CSNK1G3-206ENST00000511130 NLRP1Q9C000 1473 aa31.02■■■□□ 2.56
CSNK1G3-206ENST00000511130 CCDC144AA2RUR9 1427 aa31■■■□□ 2.55
CSNK1G3-206ENST00000511130 UHRF1BP1Q6BDS2 1440 aa31■■■□□ 2.55
CSNK1G3-206ENST00000511130 A2ML1A8K2U0 1454 aa30.99■■■□□ 2.55
CSNK1G3-206ENST00000511130 CHGAP10645 457 aaKnown RBP30.98■■■□□ 2.55
CSNK1G3-206ENST00000511130 CCER1Q8TC90 406 aaPredicted RBP30.98■■■□□ 2.55
CSNK1G3-206ENST00000511130 SIN3AQ96ST3 1273 aa30.98■■■□□ 2.55
CSNK1G3-206ENST00000511130 CEP170BQ9Y4F5 1589 aaPredicted RBP30.97■■■□□ 2.55
CSNK1G3-206ENST00000511130 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
CSNK1G3-206ENST00000511130 ZNF142P52746 1687 aaPredicted RBP30.93■■■□□ 2.54
CSNK1G3-206ENST00000511130 STAG3Q9UJ98 1225 aa30.92■■■□□ 2.54
CSNK1G3-206ENST00000511130 LMTK3Q96Q04 1460 aa30.92■■■□□ 2.54
CSNK1G3-206ENST00000511130 ADGRB3O60242 1522 aa30.92■■■□□ 2.54
CSNK1G3-206ENST00000511130 TMEM131LA2VDJ0 1609 aa30.91■■■□□ 2.54
CSNK1G3-206ENST00000511130 UBR1Q8IWV7 1749 aa30.91■■■□□ 2.54
CSNK1G3-206ENST00000511130 NEUROD1Q13562 356 aa30.9■■■□□ 2.54
CSNK1G3-206ENST00000511130 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.54
CSNK1G3-206ENST00000511130 HSPA2P54652 639 aa30.88■■■□□ 2.53
CSNK1G3-206ENST00000511130 KIF1BO60333 1816 aa30.88■■■□□ 2.53
CSNK1G3-206ENST00000511130 SPATA31E1Q6ZUB1 1445 aa30.86■■■□□ 2.53
CSNK1G3-206ENST00000511130 RGL3Q3MIN7 710 aa30.85■■■□□ 2.53
CSNK1G3-206ENST00000511130 THEMISQ8N1K5 641 aaPredicted RBP30.85■■■□□ 2.53
CSNK1G3-206ENST00000511130 KDM5AP29375 1690 aaKnown RBP30.83■■■□□ 2.53
CSNK1G3-206ENST00000511130 ZNF326Q5BKZ1 582 aaKnown RBP30.82■■■□□ 2.52
CSNK1G3-206ENST00000511130 CLSPNQ9HAW4 1339 aa30.8■■■□□ 2.52
CSNK1G3-206ENST00000511130 TMEM2Q9UHN6 1383 aa30.78■■■□□ 2.52
CSNK1G3-206ENST00000511130 NUTM2DQ5VT03 806 aaPredicted RBP30.77■■■□□ 2.52
CSNK1G3-206ENST00000511130 ARHGAP23Q9P227 1491 aa30.76■■■□□ 2.52
CSNK1G3-206ENST00000511130 RIMS2Q9UQ26 1411 aa30.76■■■□□ 2.51
CSNK1G3-206ENST00000511130 SLIT1O75093 1534 aa30.75■■■□□ 2.51
CSNK1G3-206ENST00000511130 NEURL4Q96JN8 1562 aa30.75■■■□□ 2.51
CSNK1G3-206ENST00000511130 ZFYVE9O95405 1425 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms