RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
DDX41-212ENST00000511040 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
DDX41-212ENST00000511040 HSPA2P54652 639 aa21.42■■□□□ 1.02
DDX41-212ENST00000511040 PTPRKQ15262 1439 aa21.42■■□□□ 1.02
DDX41-212ENST00000511040 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
DDX41-212ENST00000511040 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
DDX41-212ENST00000511040 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
DDX41-212ENST00000511040 RNF17Q9BXT8 1623 aaKnown RBP21.4■■□□□ 1.02
DDX41-212ENST00000511040 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.01
DDX41-212ENST00000511040 ADGRL2O95490 1459 aa21.39■■□□□ 1.01
DDX41-212ENST00000511040 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
DDX41-212ENST00000511040 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
DDX41-212ENST00000511040 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
DDX41-212ENST00000511040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.36■■□□□ 1.017e-7■■■■□ 22.3
DDX41-212ENST00000511040 UHRF1BP1Q6BDS2 1440 aa21.35■■□□□ 1.01
DDX41-212ENST00000511040 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
DDX41-212ENST00000511040 NPATQ14207 1427 aa21.34■■□□□ 1.01
DDX41-212ENST00000511040 RRBP1Q9P2E9 1410 aaKnown RBP21.34■■□□□ 1.01
DDX41-212ENST00000511040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.01
DDX41-212ENST00000511040 ABCC3O15438 1527 aa21.34■■□□□ 1.01
DDX41-212ENST00000511040 FBXO31Q5XUX0 539 aaPredicted RBP21.33■■□□□ 1.01
DDX41-212ENST00000511040 FAM135AQ9P2D6 1515 aa21.33■■□□□ 1
DDX41-212ENST00000511040 CEP152O94986 1710 aa21.31■■□□□ 1
DDX41-212ENST00000511040 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
DDX41-212ENST00000511040 PZPP20742 1482 aa21.29■■□□□ 1
DDX41-212ENST00000511040 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
DDX41-212ENST00000511040 ROCK1Q13464 1354 aa21.28■■□□□ 1
DDX41-212ENST00000511040 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
DDX41-212ENST00000511040 DEPDC5O75140 1603 aa21.27■■□□□ 1
DDX41-212ENST00000511040 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
DDX41-212ENST00000511040 KANK1Q14678 1352 aa21.25■□□□□ 0.99
DDX41-212ENST00000511040 TNRQ92752 1358 aa21.25■□□□□ 0.99
DDX41-212ENST00000511040 CAMSAP1Q5T5Y3 1602 aa21.25■□□□□ 0.99
DDX41-212ENST00000511040 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
DDX41-212ENST00000511040 CEP170BQ9Y4F5 1589 aaPredicted RBP21.2■□□□□ 0.98
DDX41-212ENST00000511040 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
DDX41-212ENST00000511040 ERVK-7P63135 1459 aa21.19■□□□□ 0.98
DDX41-212ENST00000511040 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
DDX41-212ENST00000511040 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
DDX41-212ENST00000511040 STRCQ7RTU9 1775 aa21.17■□□□□ 0.98
DDX41-212ENST00000511040 SPATA31D1Q6ZQQ2 1576 aa21.16■□□□□ 0.98
DDX41-212ENST00000511040 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
DDX41-212ENST00000511040 UNC13BO14795 1591 aa21.15■□□□□ 0.98
DDX41-212ENST00000511040 ARHGAP31Q2M1Z3 1444 aa21.15■□□□□ 0.98
DDX41-212ENST00000511040 NCKAP5LQ9HCH0 1330 aa21.12■□□□□ 0.97
DDX41-212ENST00000511040 EFCAB6Q5THR3 1501 aa21.12■□□□□ 0.97
DDX41-212ENST00000511040 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
DDX41-212ENST00000511040 NAIPQ13075 1403 aa21.12■□□□□ 0.97
DDX41-212ENST00000511040 NUP155O75694 1391 aa21.1■□□□□ 0.97
DDX41-212ENST00000511040 TET3O43151 1660 aa21.08■□□□□ 0.96
DDX41-212ENST00000511040 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
DDX41-212ENST00000511040 UGGT1Q9NYU2 1555 aa21.07■□□□□ 0.96
DDX41-212ENST00000511040 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
DDX41-212ENST00000511040 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
DDX41-212ENST00000511040 IQGAP3Q86VI3 1631 aa21.06■□□□□ 0.96
DDX41-212ENST00000511040 PLA2R1Q13018 1463 aa21.06■□□□□ 0.96
DDX41-212ENST00000511040 THEMISQ8N1K5 641 aaPredicted RBP21.05■□□□□ 0.96
DDX41-212ENST00000511040 SYNMO15061 1565 aa21.04■□□□□ 0.96
DDX41-212ENST00000511040 NOS1P29475 1434 aa21.04■□□□□ 0.96
DDX41-212ENST00000511040 PKD2Q13563 968 aa21.03■□□□□ 0.96
DDX41-212ENST00000511040 PTPRTO14522 1441 aa21.03■□□□□ 0.96
DDX41-212ENST00000511040 E9PCH4 1651 aa21.02■□□□□ 0.95
DDX41-212ENST00000511040 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
DDX41-212ENST00000511040 IDI1Q13907 227 aa21.01■□□□□ 0.95
DDX41-212ENST00000511040 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
DDX41-212ENST00000511040 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
DDX41-212ENST00000511040 PIK3C2BO00750 1634 aa21■□□□□ 0.95
DDX41-212ENST00000511040 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
DDX41-212ENST00000511040 ANKLE2Q86XL3 938 aa20.98■□□□□ 0.95
DDX41-212ENST00000511040 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
DDX41-212ENST00000511040 NEURL4Q96JN8 1562 aa20.96■□□□□ 0.95
DDX41-212ENST00000511040 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
DDX41-212ENST00000511040 ADGRB3O60242 1522 aa20.92■□□□□ 0.94
DDX41-212ENST00000511040 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
DDX41-212ENST00000511040 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
DDX41-212ENST00000511040 LTKP29376 864 aa20.91■□□□□ 0.94
DDX41-212ENST00000511040 TXNDC2Q86VQ3 553 aa20.91■□□□□ 0.94
DDX41-212ENST00000511040 TMEM2Q9UHN6 1383 aa20.9■□□□□ 0.94
DDX41-212ENST00000511040 ZNF335Q9H4Z2 1342 aaPredicted RBP20.9■□□□□ 0.94
DDX41-212ENST00000511040 SLIT1O75093 1534 aa20.89■□□□□ 0.94
DDX41-212ENST00000511040 SCAF11Q99590 1463 aaKnown RBP20.89■□□□□ 0.94
DDX41-212ENST00000511040 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.94
DDX41-212ENST00000511040 CERKQ8TCT0 537 aa20.89■□□□□ 0.93
DDX41-212ENST00000511040 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
DDX41-212ENST00000511040 SETD5Q9C0A6 1442 aa20.88■□□□□ 0.93
DDX41-212ENST00000511040 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
DDX41-212ENST00000511040 KDM5AP29375 1690 aaKnown RBP20.87■□□□□ 0.93
DDX41-212ENST00000511040 EID1Q9Y6B2 187 aa20.87■□□□□ 0.93
DDX41-212ENST00000511040 MED14O60244 1454 aa20.87■□□□□ 0.93
DDX41-212ENST00000511040 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
DDX41-212ENST00000511040 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
DDX41-212ENST00000511040 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
DDX41-212ENST00000511040 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
DDX41-212ENST00000511040 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
DDX41-212ENST00000511040 FOXD1Q16676 465 aa20.84■□□□□ 0.93
DDX41-212ENST00000511040 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.92
DDX41-212ENST00000511040 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
DDX41-212ENST00000511040 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
DDX41-212ENST00000511040 RIMS2Q9UQ26 1411 aa20.8■□□□□ 0.92
DDX41-212ENST00000511040 TRPM2O94759 1503 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms