RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
SQSTM1-213ENST00000510187 MAGI2Q86UL8 1455 aa23■■□□□ 1.27
SQSTM1-213ENST00000510187 ABCA6Q8N139 1617 aa22.99■■□□□ 1.27
SQSTM1-213ENST00000510187 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
SQSTM1-213ENST00000510187 A2MP01023 1474 aa22.99■■□□□ 1.27
SQSTM1-213ENST00000510187 DIP2CQ9Y2E4 1556 aa22.97■■□□□ 1.27
SQSTM1-213ENST00000510187 NUP155O75694 1391 aa22.95■■□□□ 1.26
SQSTM1-213ENST00000510187 KIF3BO15066 747 aa22.94■■□□□ 1.26
SQSTM1-213ENST00000510187 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
SQSTM1-213ENST00000510187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.93■■□□□ 1.26
SQSTM1-213ENST00000510187 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
SQSTM1-213ENST00000510187 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
SQSTM1-213ENST00000510187 ATP10AO60312 1499 aa22.9■■□□□ 1.26
SQSTM1-213ENST00000510187 UNC13BO14795 1591 aa22.9■■□□□ 1.26
SQSTM1-213ENST00000510187 PZPP20742 1482 aa22.89■■□□□ 1.26
SQSTM1-213ENST00000510187 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
SQSTM1-213ENST00000510187 ARHGEF40Q8TER5 1519 aa22.87■■□□□ 1.25
SQSTM1-213ENST00000510187 DEPDC5O75140 1603 aa22.84■■□□□ 1.25
SQSTM1-213ENST00000510187 FAM135AQ9P2D6 1515 aa22.84■■□□□ 1.25
SQSTM1-213ENST00000510187 REREQ9P2R6 1566 aa22.83■■□□□ 1.24
SQSTM1-213ENST00000510187 KANK1Q14678 1352 aa22.82■■□□□ 1.24
SQSTM1-213ENST00000510187 FOXD1Q16676 465 aa22.82■■□□□ 1.24
SQSTM1-213ENST00000510187 GGT6Q6P531 493 aa22.82■■□□□ 1.24
SQSTM1-213ENST00000510187 BCORL1Q5H9F3 1711 aa22.81■■□□□ 1.24
SQSTM1-213ENST00000510187 PKD2Q13563 968 aa22.81■■□□□ 1.24
SQSTM1-213ENST00000510187 PRDM15P57071 1507 aaPredicted RBP22.81■■□□□ 1.24
SQSTM1-213ENST00000510187 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
SQSTM1-213ENST00000510187 RNF17Q9BXT8 1623 aaKnown RBP22.8■■□□□ 1.24
SQSTM1-213ENST00000510187 MROH1Q8NDA8 1641 aa22.8■■□□□ 1.24
SQSTM1-213ENST00000510187 AGLP35573 1532 aa22.77■■□□□ 1.24
SQSTM1-213ENST00000510187 SIN3AQ96ST3 1273 aa22.77■■□□□ 1.23
SQSTM1-213ENST00000510187 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
SQSTM1-213ENST00000510187 SIGLEC1Q9BZZ2 1709 aa22.73■■□□□ 1.23
SQSTM1-213ENST00000510187 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
SQSTM1-213ENST00000510187 ARID4BQ4LE39 1312 aaPredicted RBP22.72■■□□□ 1.23
SQSTM1-213ENST00000510187 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
SQSTM1-213ENST00000510187 ANKRD30BQ9BXX2 1392 aa22.71■■□□□ 1.23
SQSTM1-213ENST00000510187 MLECQ14165 292 aa22.69■■□□□ 1.22
SQSTM1-213ENST00000510187 LMTK2Q8IWU2 1503 aa22.69■■□□□ 1.22
SQSTM1-213ENST00000510187 TET3O43151 1660 aa22.68■■□□□ 1.22
SQSTM1-213ENST00000510187 ABCC3O15438 1527 aa22.67■■□□□ 1.22
SQSTM1-213ENST00000510187 CEP152O94986 1710 aa22.67■■□□□ 1.22
SQSTM1-213ENST00000510187 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
SQSTM1-213ENST00000510187 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
SQSTM1-213ENST00000510187 EFCAB6Q5THR3 1501 aa22.64■■□□□ 1.22
SQSTM1-213ENST00000510187 E9PCH4 1651 aa22.64■■□□□ 1.21
SQSTM1-213ENST00000510187 ZC3H13Q5T200 1668 aaKnown RBP22.62■■□□□ 1.21
SQSTM1-213ENST00000510187 CAMSAP1Q5T5Y3 1602 aa22.59■■□□□ 1.21
SQSTM1-213ENST00000510187 PLA2R1Q13018 1463 aa22.59■■□□□ 1.21
SQSTM1-213ENST00000510187 NPATQ14207 1427 aa22.59■■□□□ 1.21
SQSTM1-213ENST00000510187 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
SQSTM1-213ENST00000510187 RPRD2Q5VT52 1461 aaKnown RBP22.58■■□□□ 1.21
SQSTM1-213ENST00000510187 CCDC144AA2RUR9 1427 aa22.56■■□□□ 1.2
SQSTM1-213ENST00000510187 PTPRTO14522 1441 aa22.56■■□□□ 1.2
SQSTM1-213ENST00000510187 ARHGAP31Q2M1Z3 1444 aa22.56■■□□□ 1.2
SQSTM1-213ENST00000510187 CLTCQ00610 1675 aaKnown RBP22.54■■□□□ 1.2
SQSTM1-213ENST00000510187 DDX10Q13206 875 aaKnown RBP22.54■■□□□ 1.2
SQSTM1-213ENST00000510187 SPHKAPQ2M3C7 1700 aa22.53■■□□□ 1.2
SQSTM1-213ENST00000510187 TRPM2O94759 1503 aa22.52■■□□□ 1.2
SQSTM1-213ENST00000510187 CCER2I3L3R5 266 aa22.52■■□□□ 1.2
SQSTM1-213ENST00000510187 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
SQSTM1-213ENST00000510187 ZMYM3Q14202 1370 aa22.48■■□□□ 1.19
SQSTM1-213ENST00000510187 NOS1P29475 1434 aa22.47■■□□□ 1.19
SQSTM1-213ENST00000510187 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
SQSTM1-213ENST00000510187 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
SQSTM1-213ENST00000510187 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.19
SQSTM1-213ENST00000510187 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.19
SQSTM1-213ENST00000510187 CLTCL1P53675 1640 aa22.45■■□□□ 1.18
SQSTM1-213ENST00000510187 UGGT1Q9NYU2 1555 aa22.44■■□□□ 1.18
SQSTM1-213ENST00000510187 ANP32CO43423 234 aa22.43■■□□□ 1.18
SQSTM1-213ENST00000510187 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
SQSTM1-213ENST00000510187 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
SQSTM1-213ENST00000510187 FER1L4A9Z1Z3 1794 aa22.42■■□□□ 1.18
SQSTM1-213ENST00000510187 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
SQSTM1-213ENST00000510187 SYNMO15061 1565 aa22.41■■□□□ 1.18
SQSTM1-213ENST00000510187 MROH2AA6NES4 1674 aa22.4■■□□□ 1.18
SQSTM1-213ENST00000510187 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
SQSTM1-213ENST00000510187 SPATA31E1Q6ZUB1 1445 aa22.38■■□□□ 1.17
SQSTM1-213ENST00000510187 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
SQSTM1-213ENST00000510187 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
SQSTM1-213ENST00000510187 CHGAP10645 457 aaKnown RBP22.36■■□□□ 1.17
SQSTM1-213ENST00000510187 CEBPAP49715 358 aaPredicted RBP22.36■■□□□ 1.17
SQSTM1-213ENST00000510187 IDI1Q13907 227 aa22.36■■□□□ 1.17
SQSTM1-213ENST00000510187 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
SQSTM1-213ENST00000510187 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
SQSTM1-213ENST00000510187 ADAMTSL3P82987 1691 aa22.35■■□□□ 1.17
SQSTM1-213ENST00000510187 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
SQSTM1-213ENST00000510187 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
SQSTM1-213ENST00000510187 KIF1BO60333 1816 aa22.33■■□□□ 1.16
SQSTM1-213ENST00000510187 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
SQSTM1-213ENST00000510187 C3P01024 1663 aa22.32■■□□□ 1.16
SQSTM1-213ENST00000510187 NEURL4Q96JN8 1562 aa22.32■■□□□ 1.16
SQSTM1-213ENST00000510187 RIMS1Q86UR5 1692 aaKnown RBP22.31■■□□□ 1.16
SQSTM1-213ENST00000510187 TNRQ92752 1358 aa22.31■■□□□ 1.16
SQSTM1-213ENST00000510187 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
SQSTM1-213ENST00000510187 ZNF326Q5BKZ1 582 aaKnown RBP22.29■■□□□ 1.16
SQSTM1-213ENST00000510187 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
SQSTM1-213ENST00000510187 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
SQSTM1-213ENST00000510187 HSPA5P11021 654 aaKnown RBP22.24■■□□□ 1.15
SQSTM1-213ENST00000510187 EIF4G2P78344 907 aaKnown RBP eCLIP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms