RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 FAM135AQ9P2D6 1515 aa12.84□□□□□ -0.35
SEC24D-209ENST00000509818 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
SEC24D-209ENST00000509818 SCAPERQ9BY12 1400 aa12.83□□□□□ -0.36
SEC24D-209ENST00000509818 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
SEC24D-209ENST00000509818 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
SEC24D-209ENST00000509818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.362e-7■■■□□ 15.1
SEC24D-209ENST00000509818 ZFYVE16Q7Z3T8 1539 aa12.81□□□□□ -0.36
SEC24D-209ENST00000509818 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
SEC24D-209ENST00000509818 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
SEC24D-209ENST00000509818 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
SEC24D-209ENST00000509818 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
SEC24D-209ENST00000509818 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
SEC24D-209ENST00000509818 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
SEC24D-209ENST00000509818 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
SEC24D-209ENST00000509818 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
SEC24D-209ENST00000509818 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC24D-209ENST00000509818 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
SEC24D-209ENST00000509818 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
SEC24D-209ENST00000509818 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
SEC24D-209ENST00000509818 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
SEC24D-209ENST00000509818 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
SEC24D-209ENST00000509818 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
SEC24D-209ENST00000509818 ZNF518AQ6AHZ1 1483 aa12.76□□□□□ -0.37
SEC24D-209ENST00000509818 ADAMTSL3P82987 1691 aa12.75□□□□□ -0.37
SEC24D-209ENST00000509818 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
SEC24D-209ENST00000509818 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
SEC24D-209ENST00000509818 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
SEC24D-209ENST00000509818 KANK1Q14678 1352 aa12.74□□□□□ -0.37
SEC24D-209ENST00000509818 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
SEC24D-209ENST00000509818 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
SEC24D-209ENST00000509818 ATP10AO60312 1499 aa12.73□□□□□ -0.37
SEC24D-209ENST00000509818 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
SEC24D-209ENST00000509818 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
SEC24D-209ENST00000509818 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
SEC24D-209ENST00000509818 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
SEC24D-209ENST00000509818 PLA2R1Q13018 1463 aa12.71□□□□□ -0.37
SEC24D-209ENST00000509818 KDM5CP41229 1560 aa12.71□□□□□ -0.37
SEC24D-209ENST00000509818 KIF3BO15066 747 aa12.71□□□□□ -0.37
SEC24D-209ENST00000509818 PTPRMP28827 1452 aa12.71□□□□□ -0.38
SEC24D-209ENST00000509818 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
SEC24D-209ENST00000509818 HECW2Q9P2P5 1572 aa12.7□□□□□ -0.38
SEC24D-209ENST00000509818 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
SEC24D-209ENST00000509818 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
SEC24D-209ENST00000509818 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
SEC24D-209ENST00000509818 A2MP01023 1474 aa12.68□□□□□ -0.38
SEC24D-209ENST00000509818 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
SEC24D-209ENST00000509818 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
SEC24D-209ENST00000509818 TET3O43151 1660 aa12.68□□□□□ -0.38
SEC24D-209ENST00000509818 MLECQ14165 292 aa12.68□□□□□ -0.38
SEC24D-209ENST00000509818 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
SEC24D-209ENST00000509818 E9PCH4 1651 aa12.67□□□□□ -0.38
SEC24D-209ENST00000509818 ANP32CO43423 234 aa12.67□□□□□ -0.38
SEC24D-209ENST00000509818 DIP2CQ9Y2E4 1556 aa12.67□□□□□ -0.38
SEC24D-209ENST00000509818 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
SEC24D-209ENST00000509818 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
SEC24D-209ENST00000509818 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
SEC24D-209ENST00000509818 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
SEC24D-209ENST00000509818 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
SEC24D-209ENST00000509818 PTPRTO14522 1441 aa12.66□□□□□ -0.38
SEC24D-209ENST00000509818 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
SEC24D-209ENST00000509818 MROH1Q8NDA8 1641 aa12.64□□□□□ -0.39
SEC24D-209ENST00000509818 USP47Q96K76 1375 aa12.64□□□□□ -0.39
SEC24D-209ENST00000509818 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
SEC24D-209ENST00000509818 PLPPR3Q6T4P5 718 aa12.63□□□□□ -0.39
SEC24D-209ENST00000509818 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
SEC24D-209ENST00000509818 TRPM2O94759 1503 aa12.63□□□□□ -0.39
SEC24D-209ENST00000509818 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
SEC24D-209ENST00000509818 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
SEC24D-209ENST00000509818 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
SEC24D-209ENST00000509818 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
SEC24D-209ENST00000509818 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
SEC24D-209ENST00000509818 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
SEC24D-209ENST00000509818 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
SEC24D-209ENST00000509818 POLR1AO95602 1720 aaPredicted RBP12.61□□□□□ -0.39
SEC24D-209ENST00000509818 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
SEC24D-209ENST00000509818 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
SEC24D-209ENST00000509818 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
SEC24D-209ENST00000509818 ROCK2O75116 1388 aaKnown RBP12.6□□□□□ -0.39
SEC24D-209ENST00000509818 CEP152O94986 1710 aa12.6□□□□□ -0.39
SEC24D-209ENST00000509818 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
SEC24D-209ENST00000509818 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
SEC24D-209ENST00000509818 EFCAB6Q5THR3 1501 aa12.59□□□□□ -0.39
SEC24D-209ENST00000509818 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
SEC24D-209ENST00000509818 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.39
SEC24D-209ENST00000509818 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
SEC24D-209ENST00000509818 GGT6Q6P531 493 aa12.58□□□□□ -0.4
SEC24D-209ENST00000509818 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
SEC24D-209ENST00000509818 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
SEC24D-209ENST00000509818 GPRASP1Q5JY77 1395 aa12.57□□□□□ -0.4
SEC24D-209ENST00000509818 LAMC1P11047 1609 aa12.56□□□□□ -0.4
SEC24D-209ENST00000509818 AGLP35573 1532 aa12.56□□□□□ -0.4
SEC24D-209ENST00000509818 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
SEC24D-209ENST00000509818 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
SEC24D-209ENST00000509818 HSPA2P54652 639 aa12.54□□□□□ -0.4
SEC24D-209ENST00000509818 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
SEC24D-209ENST00000509818 KIF1BO60333 1816 aa12.53□□□□□ -0.4
SEC24D-209ENST00000509818 ABCC3O15438 1527 aa12.53□□□□□ -0.4
SEC24D-209ENST00000509818 NPATQ14207 1427 aa12.52□□□□□ -0.41
SEC24D-209ENST00000509818 C3P01024 1663 aa12.5□□□□□ -0.41
SEC24D-209ENST00000509818 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms