RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
LYSMD3-204ENST00000509384 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
LYSMD3-204ENST00000509384 PKD2Q13563 968 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 A2MP01023 1474 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.52
LYSMD3-204ENST00000509384 FRMPD1Q5SYB0 1578 aa18.27■□□□□ 0.51
LYSMD3-204ENST00000509384 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
LYSMD3-204ENST00000509384 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
LYSMD3-204ENST00000509384 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
LYSMD3-204ENST00000509384 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
LYSMD3-204ENST00000509384 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
LYSMD3-204ENST00000509384 KIF3BO15066 747 aa18.23■□□□□ 0.51
LYSMD3-204ENST00000509384 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
LYSMD3-204ENST00000509384 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
LYSMD3-204ENST00000509384 KANK1Q14678 1352 aa18.21■□□□□ 0.51
LYSMD3-204ENST00000509384 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
LYSMD3-204ENST00000509384 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
LYSMD3-204ENST00000509384 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
LYSMD3-204ENST00000509384 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
LYSMD3-204ENST00000509384 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 BCORL1Q5H9F3 1711 aa18.14■□□□□ 0.49
LYSMD3-204ENST00000509384 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
LYSMD3-204ENST00000509384 ATP10AO60312 1499 aa18.13■□□□□ 0.49
LYSMD3-204ENST00000509384 TET3O43151 1660 aa18.11■□□□□ 0.49
LYSMD3-204ENST00000509384 GGT6Q6P531 493 aa18.11■□□□□ 0.49
LYSMD3-204ENST00000509384 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 ARHGEF40Q8TER5 1519 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 REREQ9P2R6 1566 aa18.09■□□□□ 0.49
LYSMD3-204ENST00000509384 PLA2R1Q13018 1463 aa18.09■□□□□ 0.49
LYSMD3-204ENST00000509384 L3MBTL2Q969R5 705 aa18.08■□□□□ 0.49
LYSMD3-204ENST00000509384 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
LYSMD3-204ENST00000509384 E9PCH4 1651 aa18.07■□□□□ 0.48
LYSMD3-204ENST00000509384 ABCC3O15438 1527 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 AGLP35573 1532 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
LYSMD3-204ENST00000509384 PTPRTO14522 1441 aa18.04■□□□□ 0.48
LYSMD3-204ENST00000509384 TRPM2O94759 1503 aa18.03■□□□□ 0.48
LYSMD3-204ENST00000509384 CEP152O94986 1710 aa18.02■□□□□ 0.48
LYSMD3-204ENST00000509384 SPHKAPQ2M3C7 1700 aa18■□□□□ 0.47
LYSMD3-204ENST00000509384 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
LYSMD3-204ENST00000509384 NPATQ14207 1427 aa17.99■□□□□ 0.47
LYSMD3-204ENST00000509384 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
LYSMD3-204ENST00000509384 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LYSMD3-204ENST00000509384 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
LYSMD3-204ENST00000509384 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
LYSMD3-204ENST00000509384 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
LYSMD3-204ENST00000509384 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
LYSMD3-204ENST00000509384 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
LYSMD3-204ENST00000509384 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 MLECQ14165 292 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
LYSMD3-204ENST00000509384 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
LYSMD3-204ENST00000509384 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 NOS1P29475 1434 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
LYSMD3-204ENST00000509384 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
LYSMD3-204ENST00000509384 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
LYSMD3-204ENST00000509384 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
LYSMD3-204ENST00000509384 CLTCQ00610 1675 aaKnown RBP17.84■□□□□ 0.45
LYSMD3-204ENST00000509384 SYNMO15061 1565 aa17.84■□□□□ 0.45
LYSMD3-204ENST00000509384 ADGRB3O60242 1522 aa17.83■□□□□ 0.45
LYSMD3-204ENST00000509384 ERVK-7P63135 1459 aa17.83■□□□□ 0.44
LYSMD3-204ENST00000509384 EIF4G2P78344 907 aaKnown RBP eCLIP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 STAC3Q96MF2 364 aa17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 HSPA5P11021 654 aaKnown RBP17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
LYSMD3-204ENST00000509384 KIF1BO60333 1816 aa17.8■□□□□ 0.44
LYSMD3-204ENST00000509384 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
LYSMD3-204ENST00000509384 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 MROH2AA6NES4 1674 aa17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 SPATA31D1Q6ZQQ2 1576 aa17.77■□□□□ 0.44
LYSMD3-204ENST00000509384 MYOM2P54296 1465 aa17.77■□□□□ 0.44
LYSMD3-204ENST00000509384 IDI1Q13907 227 aa17.77■□□□□ 0.43
LYSMD3-204ENST00000509384 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.43
LYSMD3-204ENST00000509384 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 USP47Q96K76 1375 aa17.75■□□□□ 0.43
LYSMD3-204ENST00000509384 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
LYSMD3-204ENST00000509384 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
LYSMD3-204ENST00000509384 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
LYSMD3-204ENST00000509384 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
LYSMD3-204ENST00000509384 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms