RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
LYSMD3-204ENST00000509384 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
LYSMD3-204ENST00000509384 PKD2Q13563 968 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 A2MP01023 1474 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
LYSMD3-204ENST00000509384 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.52
LYSMD3-204ENST00000509384 FRMPD1Q5SYB0 1578 aa18.27■□□□□ 0.51
LYSMD3-204ENST00000509384 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
LYSMD3-204ENST00000509384 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
LYSMD3-204ENST00000509384 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
LYSMD3-204ENST00000509384 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
LYSMD3-204ENST00000509384 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
LYSMD3-204ENST00000509384 KIF3BO15066 747 aa18.23■□□□□ 0.51
LYSMD3-204ENST00000509384 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
LYSMD3-204ENST00000509384 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
LYSMD3-204ENST00000509384 KANK1Q14678 1352 aa18.21■□□□□ 0.51
LYSMD3-204ENST00000509384 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
LYSMD3-204ENST00000509384 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
LYSMD3-204ENST00000509384 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
LYSMD3-204ENST00000509384 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
LYSMD3-204ENST00000509384 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
LYSMD3-204ENST00000509384 BCORL1Q5H9F3 1711 aa18.14■□□□□ 0.49
LYSMD3-204ENST00000509384 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
LYSMD3-204ENST00000509384 ATP10AO60312 1499 aa18.13■□□□□ 0.49
LYSMD3-204ENST00000509384 TET3O43151 1660 aa18.11■□□□□ 0.49
LYSMD3-204ENST00000509384 GGT6Q6P531 493 aa18.11■□□□□ 0.49
LYSMD3-204ENST00000509384 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 ARHGEF40Q8TER5 1519 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
LYSMD3-204ENST00000509384 REREQ9P2R6 1566 aa18.09■□□□□ 0.49
LYSMD3-204ENST00000509384 PLA2R1Q13018 1463 aa18.09■□□□□ 0.49
LYSMD3-204ENST00000509384 L3MBTL2Q969R5 705 aa18.08■□□□□ 0.49
LYSMD3-204ENST00000509384 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
LYSMD3-204ENST00000509384 E9PCH4 1651 aa18.07■□□□□ 0.48
LYSMD3-204ENST00000509384 ABCC3O15438 1527 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 AGLP35573 1532 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
LYSMD3-204ENST00000509384 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
LYSMD3-204ENST00000509384 PTPRTO14522 1441 aa18.04■□□□□ 0.48
LYSMD3-204ENST00000509384 TRPM2O94759 1503 aa18.03■□□□□ 0.48
LYSMD3-204ENST00000509384 CEP152O94986 1710 aa18.02■□□□□ 0.48
LYSMD3-204ENST00000509384 SPHKAPQ2M3C7 1700 aa18■□□□□ 0.47
LYSMD3-204ENST00000509384 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
LYSMD3-204ENST00000509384 NPATQ14207 1427 aa17.99■□□□□ 0.47
LYSMD3-204ENST00000509384 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
LYSMD3-204ENST00000509384 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LYSMD3-204ENST00000509384 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
LYSMD3-204ENST00000509384 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
LYSMD3-204ENST00000509384 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
LYSMD3-204ENST00000509384 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
LYSMD3-204ENST00000509384 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
LYSMD3-204ENST00000509384 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
LYSMD3-204ENST00000509384 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 MLECQ14165 292 aa17.92■□□□□ 0.46
LYSMD3-204ENST00000509384 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
LYSMD3-204ENST00000509384 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
LYSMD3-204ENST00000509384 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 NOS1P29475 1434 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
LYSMD3-204ENST00000509384 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
LYSMD3-204ENST00000509384 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
LYSMD3-204ENST00000509384 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
LYSMD3-204ENST00000509384 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
LYSMD3-204ENST00000509384 CLTCQ00610 1675 aaKnown RBP17.84■□□□□ 0.45
LYSMD3-204ENST00000509384 SYNMO15061 1565 aa17.84■□□□□ 0.45
LYSMD3-204ENST00000509384 ADGRB3O60242 1522 aa17.83■□□□□ 0.45
LYSMD3-204ENST00000509384 ERVK-7P63135 1459 aa17.83■□□□□ 0.44
LYSMD3-204ENST00000509384 EIF4G2P78344 907 aaKnown RBP eCLIP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 STAC3Q96MF2 364 aa17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
LYSMD3-204ENST00000509384 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 HSPA5P11021 654 aaKnown RBP17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
LYSMD3-204ENST00000509384 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
LYSMD3-204ENST00000509384 KIF1BO60333 1816 aa17.8■□□□□ 0.44
LYSMD3-204ENST00000509384 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
LYSMD3-204ENST00000509384 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 MROH2AA6NES4 1674 aa17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
LYSMD3-204ENST00000509384 SPATA31D1Q6ZQQ2 1576 aa17.77■□□□□ 0.44
LYSMD3-204ENST00000509384 MYOM2P54296 1465 aa17.77■□□□□ 0.44
LYSMD3-204ENST00000509384 IDI1Q13907 227 aa17.77■□□□□ 0.43
LYSMD3-204ENST00000509384 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.43
LYSMD3-204ENST00000509384 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
LYSMD3-204ENST00000509384 USP47Q96K76 1375 aa17.75■□□□□ 0.43
LYSMD3-204ENST00000509384 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
LYSMD3-204ENST00000509384 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
LYSMD3-204ENST00000509384 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
LYSMD3-204ENST00000509384 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
LYSMD3-204ENST00000509384 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms