RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, human

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYSMD3-204	ENST00000509384	U2AF2	P26368	475 aa	Known RBP eCLIP	14.53	□□□□□ -0.08	3e-31	■■■■■ 109.2
LYSMD3-204	ENST00000509384	U2AF1	Q01081	240 aa	Known RBP eCLIP	16.72	■□□□□ 0.27	2e-12	■■■■■ 59
LYSMD3-204	ENST00000509384	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.01	□□□□□ -0.33	4e-7	■■■■■ 40.2
LYSMD3-204	ENST00000509384	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.7	□□□□□ -0.38	3e-6	■■■■■ 26.9
LYSMD3-204	ENST00000509384	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.91	□□□□□ -0.34	9e-7	■■■■□ 22.9
LYSMD3-204	ENST00000509384	AQR	O60306	1485 aa	Known RBP eCLIP	20.16	■□□□□ 0.82	2e-7	■■■□□ 15.3
LYSMD3-204	ENST00000509384	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	1e-5	■■□□□ 14.4
LYSMD3-204	ENST00000509384	ZNF622	Q969S3	477 aa	Known RBP eCLIP	15.14	■□□□□ 0.01	1e-8	■□□□□ 9.7

Retrieved 8 of 8 RNA–protein pairs in 3.8 ms