RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
TRIM41-204ENST00000508930 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
TRIM41-204ENST00000508930 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
TRIM41-204ENST00000508930 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
TRIM41-204ENST00000508930 PANK3Q9H999 370 aa18.61■□□□□ 0.57
TRIM41-204ENST00000508930 KDM5CP41229 1560 aa18.61■□□□□ 0.57
TRIM41-204ENST00000508930 MBD5Q9P267 1494 aa18.61■□□□□ 0.57
TRIM41-204ENST00000508930 DNMT1P26358 1616 aaKnown RBP18.61■□□□□ 0.57
TRIM41-204ENST00000508930 KIF14Q15058 1648 aa18.6■□□□□ 0.57
TRIM41-204ENST00000508930 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
TRIM41-204ENST00000508930 ARXQ96QS3 562 aa18.59■□□□□ 0.57
TRIM41-204ENST00000508930 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
TRIM41-204ENST00000508930 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
TRIM41-204ENST00000508930 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.56
TRIM41-204ENST00000508930 WDR62O43379 1518 aa18.57■□□□□ 0.56
TRIM41-204ENST00000508930 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
TRIM41-204ENST00000508930 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
TRIM41-204ENST00000508930 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
TRIM41-204ENST00000508930 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
TRIM41-204ENST00000508930 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
TRIM41-204ENST00000508930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.55■□□□□ 0.566e-9■■■■□ 23.1
TRIM41-204ENST00000508930 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
TRIM41-204ENST00000508930 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
TRIM41-204ENST00000508930 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
TRIM41-204ENST00000508930 BECN1Q14457 450 aa18.54■□□□□ 0.56
TRIM41-204ENST00000508930 TMF1P82094 1093 aa18.54■□□□□ 0.56
TRIM41-204ENST00000508930 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
TRIM41-204ENST00000508930 UBE2Q2Q8WVN8 375 aa18.54■□□□□ 0.56
TRIM41-204ENST00000508930 SLKQ9H2G2 1235 aaPredicted RBP18.54■□□□□ 0.56
TRIM41-204ENST00000508930 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
TRIM41-204ENST00000508930 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
TRIM41-204ENST00000508930 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
TRIM41-204ENST00000508930 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
TRIM41-204ENST00000508930 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.55
TRIM41-204ENST00000508930 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
TRIM41-204ENST00000508930 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-204ENST00000508930 FBLN2P98095 1184 aa18.47■□□□□ 0.55
TRIM41-204ENST00000508930 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
TRIM41-204ENST00000508930 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
TRIM41-204ENST00000508930 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
TRIM41-204ENST00000508930 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM41-204ENST00000508930 POGKQ9P215 609 aa18.47■□□□□ 0.55
TRIM41-204ENST00000508930 NUP153P49790 1475 aaKnown RBP18.47■□□□□ 0.55
TRIM41-204ENST00000508930 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
TRIM41-204ENST00000508930 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
TRIM41-204ENST00000508930 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
TRIM41-204ENST00000508930 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
TRIM41-204ENST00000508930 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
TRIM41-204ENST00000508930 PLEKHH2Q8IVE3 1493 aa18.44■□□□□ 0.54
TRIM41-204ENST00000508930 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
TRIM41-204ENST00000508930 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
TRIM41-204ENST00000508930 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
TRIM41-204ENST00000508930 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
TRIM41-204ENST00000508930 PLEKHH1Q9ULM0 1364 aa18.41■□□□□ 0.54
TRIM41-204ENST00000508930 BCAR3O75815 825 aa18.4■□□□□ 0.54
TRIM41-204ENST00000508930 ADGRL2O95490 1459 aa18.4■□□□□ 0.54
TRIM41-204ENST00000508930 APAF1O14727 1248 aa18.4■□□□□ 0.54
TRIM41-204ENST00000508930 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
TRIM41-204ENST00000508930 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.54
TRIM41-204ENST00000508930 ERBINQ96RT1 1412 aa18.39■□□□□ 0.53
TRIM41-204ENST00000508930 SLFN5Q08AF3 891 aa18.38■□□□□ 0.53
TRIM41-204ENST00000508930 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
TRIM41-204ENST00000508930 TESK2Q96S53 571 aa18.38■□□□□ 0.53
TRIM41-204ENST00000508930 GZF1Q9H116 711 aaPredicted RBP18.38■□□□□ 0.53
TRIM41-204ENST00000508930 GLIPR1L2Q4G1C9 344 aa18.37■□□□□ 0.53
TRIM41-204ENST00000508930 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-204ENST00000508930 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
TRIM41-204ENST00000508930 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
TRIM41-204ENST00000508930 INSRP06213 1382 aa18.36■□□□□ 0.53
TRIM41-204ENST00000508930 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
TRIM41-204ENST00000508930 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
TRIM41-204ENST00000508930 IGHDP01880 384 aa18.35■□□□□ 0.53
TRIM41-204ENST00000508930 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
TRIM41-204ENST00000508930 CGNL1Q0VF96 1302 aa18.34■□□□□ 0.53
TRIM41-204ENST00000508930 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
TRIM41-204ENST00000508930 GOLGA6L3A6NEY3 463 aa18.34■□□□□ 0.53
TRIM41-204ENST00000508930 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.53
TRIM41-204ENST00000508930 PANK1Q8TE04 598 aa18.33■□□□□ 0.53
TRIM41-204ENST00000508930 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
TRIM41-204ENST00000508930 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.52
TRIM41-204ENST00000508930 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-204ENST00000508930 E9PSI1 815 aa18.33■□□□□ 0.52
TRIM41-204ENST00000508930 SEC24BO95487 1268 aa18.33■□□□□ 0.52
TRIM41-204ENST00000508930 NEUROD2Q15784 382 aa18.33■□□□□ 0.52
TRIM41-204ENST00000508930 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
TRIM41-204ENST00000508930 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
TRIM41-204ENST00000508930 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
TRIM41-204ENST00000508930 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
TRIM41-204ENST00000508930 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
TRIM41-204ENST00000508930 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
TRIM41-204ENST00000508930 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
TRIM41-204ENST00000508930 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
TRIM41-204ENST00000508930 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
TRIM41-204ENST00000508930 E9PCH4 1651 aa18.28■□□□□ 0.52
TRIM41-204ENST00000508930 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
TRIM41-204ENST00000508930 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
TRIM41-204ENST00000508930 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
TRIM41-204ENST00000508930 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
TRIM41-204ENST00000508930 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
TRIM41-204ENST00000508930 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms