RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
SH3RF1-203ENST00000508685 ADGRL1O94910 1474 aa15.46■□□□□ 0.06
SH3RF1-203ENST00000508685 PPRC1Q5VV67 1664 aaKnown RBP15.46■□□□□ 0.06
SH3RF1-203ENST00000508685 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
SH3RF1-203ENST00000508685 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
SH3RF1-203ENST00000508685 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
SH3RF1-203ENST00000508685 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
SH3RF1-203ENST00000508685 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
SH3RF1-203ENST00000508685 IQGAP3Q86VI3 1631 aa15.41■□□□□ 0.06
SH3RF1-203ENST00000508685 INO80Q9ULG1 1556 aaPredicted RBP15.41■□□□□ 0.06
SH3RF1-203ENST00000508685 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
SH3RF1-203ENST00000508685 ANP32CO43423 234 aa15.39■□□□□ 0.05
SH3RF1-203ENST00000508685 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
SH3RF1-203ENST00000508685 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
SH3RF1-203ENST00000508685 PLA2R1Q13018 1463 aa15.37■□□□□ 0.05
SH3RF1-203ENST00000508685 MYT1LQ9UL68 1186 aa15.36■□□□□ 0.05
SH3RF1-203ENST00000508685 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
SH3RF1-203ENST00000508685 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
SH3RF1-203ENST00000508685 ZNF518AQ6AHZ1 1483 aa15.34■□□□□ 0.05
SH3RF1-203ENST00000508685 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
SH3RF1-203ENST00000508685 NEO1Q92859 1461 aa15.33■□□□□ 0.04
SH3RF1-203ENST00000508685 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.04
SH3RF1-203ENST00000508685 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.04
SH3RF1-203ENST00000508685 DEPDC5O75140 1603 aa15.32■□□□□ 0.04
SH3RF1-203ENST00000508685 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
SH3RF1-203ENST00000508685 POGZQ7Z3K3 1410 aa15.32■□□□□ 0.04
SH3RF1-203ENST00000508685 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
SH3RF1-203ENST00000508685 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
SH3RF1-203ENST00000508685 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
SH3RF1-203ENST00000508685 C11orf95C9JLR9 678 aaPredicted RBP15.3■□□□□ 0.04
SH3RF1-203ENST00000508685 KIF3BO15066 747 aa15.3■□□□□ 0.04
SH3RF1-203ENST00000508685 DHX29Q7Z478 1369 aaKnown RBP15.3■□□□□ 0.04
SH3RF1-203ENST00000508685 E9PCH4 1651 aa15.29■□□□□ 0.04
SH3RF1-203ENST00000508685 KDM5CP41229 1560 aa15.29■□□□□ 0.04
SH3RF1-203ENST00000508685 ATP10AO60312 1499 aa15.29■□□□□ 0.04
SH3RF1-203ENST00000508685 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
SH3RF1-203ENST00000508685 RALGAPBQ86X10 1494 aa15.28■□□□□ 0.04
SH3RF1-203ENST00000508685 MROH1Q8NDA8 1641 aa15.28■□□□□ 0.04
SH3RF1-203ENST00000508685 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
SH3RF1-203ENST00000508685 NEFLP07196 543 aa15.27■□□□□ 0.03
SH3RF1-203ENST00000508685 USP47Q96K76 1375 aa15.27■□□□□ 0.03
SH3RF1-203ENST00000508685 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.03
SH3RF1-203ENST00000508685 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
SH3RF1-203ENST00000508685 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
SH3RF1-203ENST00000508685 A2MP01023 1474 aa15.26■□□□□ 0.03
SH3RF1-203ENST00000508685 HECW2Q9P2P5 1572 aa15.26■□□□□ 0.03
SH3RF1-203ENST00000508685 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
SH3RF1-203ENST00000508685 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
SH3RF1-203ENST00000508685 TET3O43151 1660 aa15.24■□□□□ 0.03
SH3RF1-203ENST00000508685 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
SH3RF1-203ENST00000508685 KANK1Q14678 1352 aa15.24■□□□□ 0.03
SH3RF1-203ENST00000508685 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
SH3RF1-203ENST00000508685 PRAG1Q86YV5 1406 aa15.23■□□□□ 0.03
SH3RF1-203ENST00000508685 ABCA6Q8N139 1617 aa15.23■□□□□ 0.03
SH3RF1-203ENST00000508685 KIF7Q2M1P5 1343 aa15.23■□□□□ 0.03
SH3RF1-203ENST00000508685 TRPM2O94759 1503 aa15.22■□□□□ 0.03
SH3RF1-203ENST00000508685 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
SH3RF1-203ENST00000508685 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
SH3RF1-203ENST00000508685 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.03
SH3RF1-203ENST00000508685 PTPRTO14522 1441 aa15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 POLR1AO95602 1720 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 FKBP8Q14318 412 aa15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 TRPM1Q7Z4N2 1603 aa15.2■□□□□ 0.02
SH3RF1-203ENST00000508685 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
SH3RF1-203ENST00000508685 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
SH3RF1-203ENST00000508685 RICTORQ6R327 1708 aa15.19■□□□□ 0.02
SH3RF1-203ENST00000508685 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
SH3RF1-203ENST00000508685 CEP152O94986 1710 aa15.17■□□□□ 0.02
SH3RF1-203ENST00000508685 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
SH3RF1-203ENST00000508685 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
SH3RF1-203ENST00000508685 GGT6Q6P531 493 aa15.16■□□□□ 0.02
SH3RF1-203ENST00000508685 DIP2CQ9Y2E4 1556 aa15.16■□□□□ 0.02
SH3RF1-203ENST00000508685 ST20-MTHFSA0A0A6YYL1 179 aa15.16■□□□□ 0.02
SH3RF1-203ENST00000508685 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.02
SH3RF1-203ENST00000508685 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
SH3RF1-203ENST00000508685 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
SH3RF1-203ENST00000508685 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
SH3RF1-203ENST00000508685 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
SH3RF1-203ENST00000508685 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
SH3RF1-203ENST00000508685 NPATQ14207 1427 aa15.11■□□□□ 0.01
SH3RF1-203ENST00000508685 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
SH3RF1-203ENST00000508685 ABCC3O15438 1527 aa15.1■□□□□ 0.01
SH3RF1-203ENST00000508685 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
SH3RF1-203ENST00000508685 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
SH3RF1-203ENST00000508685 LAMC1P11047 1609 aa15.08■□□□□ 0
SH3RF1-203ENST00000508685 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
SH3RF1-203ENST00000508685 ARHGEF40Q8TER5 1519 aa15.08■□□□□ 0
SH3RF1-203ENST00000508685 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
SH3RF1-203ENST00000508685 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
SH3RF1-203ENST00000508685 MROH2AA6NES4 1674 aa15.06■□□□□ 0
SH3RF1-203ENST00000508685 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
SH3RF1-203ENST00000508685 BCANQ96GW7 911 aa15.06■□□□□ 0
SH3RF1-203ENST00000508685 CAMSAP1Q5T5Y3 1602 aa15.06■□□□□ 0
SH3RF1-203ENST00000508685 NEURL4Q96JN8 1562 aa15.05■□□□□ 0
SH3RF1-203ENST00000508685 KIF1BO60333 1816 aa15.05■□□□□ -0
SH3RF1-203ENST00000508685 HNRNPUQ00839 825 aaKnown RBP eCLIP15.04■□□□□ -0
SH3RF1-203ENST00000508685 CCDC184Q52MB2 194 aa15.04■□□□□ -0
SH3RF1-203ENST00000508685 SIGLEC1Q9BZZ2 1709 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms