RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 CHD1O14646 1710 aa13.26□□□□□ -0.29
SEC31A-227ENST00000508502 CCDC144AA2RUR9 1427 aa13.26□□□□□ -0.29
SEC31A-227ENST00000508502 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
SEC31A-227ENST00000508502 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
SEC31A-227ENST00000508502 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
SEC31A-227ENST00000508502 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
SEC31A-227ENST00000508502 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
SEC31A-227ENST00000508502 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
SEC31A-227ENST00000508502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEC31A-227ENST00000508502 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
SEC31A-227ENST00000508502 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
SEC31A-227ENST00000508502 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
SEC31A-227ENST00000508502 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
SEC31A-227ENST00000508502 PLA2R1Q13018 1463 aa13.21□□□□□ -0.3
SEC31A-227ENST00000508502 UNC13BO14795 1591 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 RALBP1Q15311 655 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 SHROOM2Q13796 1616 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
SEC31A-227ENST00000508502 ABCC2Q92887 1545 aa13.2□□□□□ -0.3
SEC31A-227ENST00000508502 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
SEC31A-227ENST00000508502 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
SEC31A-227ENST00000508502 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
SEC31A-227ENST00000508502 MYO5CQ9NQX4 1742 aa13.18□□□□□ -0.3
SEC31A-227ENST00000508502 A2MP01023 1474 aa13.18□□□□□ -0.3
SEC31A-227ENST00000508502 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
SEC31A-227ENST00000508502 E9PCH4 1651 aa13.17□□□□□ -0.3
SEC31A-227ENST00000508502 LRPPRCP42704 1394 aaKnown RBP13.17□□□□□ -0.3
SEC31A-227ENST00000508502 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
SEC31A-227ENST00000508502 MSH5O43196 834 aa13.16□□□□□ -0.3
SEC31A-227ENST00000508502 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
SEC31A-227ENST00000508502 DUOX2Q9NRD8 1548 aa13.16□□□□□ -0.3
SEC31A-227ENST00000508502 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
SEC31A-227ENST00000508502 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.3
SEC31A-227ENST00000508502 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
SEC31A-227ENST00000508502 PLCH2O75038 1416 aa13.14□□□□□ -0.31
SEC31A-227ENST00000508502 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
SEC31A-227ENST00000508502 ERBINQ96RT1 1412 aa13.13□□□□□ -0.31
SEC31A-227ENST00000508502 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
SEC31A-227ENST00000508502 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
SEC31A-227ENST00000508502 TESK2Q96S53 571 aa13.12□□□□□ -0.31
SEC31A-227ENST00000508502 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
SEC31A-227ENST00000508502 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
SEC31A-227ENST00000508502 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
SEC31A-227ENST00000508502 PRDM15P57071 1507 aaPredicted RBP13.12□□□□□ -0.31
SEC31A-227ENST00000508502 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
SEC31A-227ENST00000508502 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
SEC31A-227ENST00000508502 ATP10AO60312 1499 aa13.11□□□□□ -0.31
SEC31A-227ENST00000508502 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
SEC31A-227ENST00000508502 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
SEC31A-227ENST00000508502 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
SEC31A-227ENST00000508502 LAMC1P11047 1609 aa13.1□□□□□ -0.31
SEC31A-227ENST00000508502 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
SEC31A-227ENST00000508502 TMF1P82094 1093 aa13.09□□□□□ -0.31
SEC31A-227ENST00000508502 PANK3Q9H999 370 aa13.09□□□□□ -0.31
SEC31A-227ENST00000508502 ABCC1P33527 1531 aa13.09□□□□□ -0.31
SEC31A-227ENST00000508502 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
SEC31A-227ENST00000508502 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
SEC31A-227ENST00000508502 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
SEC31A-227ENST00000508502 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
SEC31A-227ENST00000508502 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
SEC31A-227ENST00000508502 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
SEC31A-227ENST00000508502 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
SEC31A-227ENST00000508502 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
SEC31A-227ENST00000508502 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
SEC31A-227ENST00000508502 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.32
SEC31A-227ENST00000508502 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.32
SEC31A-227ENST00000508502 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
SEC31A-227ENST00000508502 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
SEC31A-227ENST00000508502 EXOC6Q8TAG9 804 aa13.01□□□□□ -0.33
SEC31A-227ENST00000508502 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
SEC31A-227ENST00000508502 MADDQ8WXG6 1647 aa13□□□□□ -0.33
SEC31A-227ENST00000508502 TRPM2O94759 1503 aa13□□□□□ -0.33
SEC31A-227ENST00000508502 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
SEC31A-227ENST00000508502 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
SEC31A-227ENST00000508502 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
SEC31A-227ENST00000508502 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
SEC31A-227ENST00000508502 PTPRTO14522 1441 aa12.98□□□□□ -0.33
SEC31A-227ENST00000508502 KANK1Q14678 1352 aa12.98□□□□□ -0.33
SEC31A-227ENST00000508502 KIF3BO15066 747 aa12.98□□□□□ -0.33
SEC31A-227ENST00000508502 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 INSRP06213 1382 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 FANCAO15360 1455 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
SEC31A-227ENST00000508502 CEP152O94986 1710 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
SEC31A-227ENST00000508502 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
SEC31A-227ENST00000508502 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
SEC31A-227ENST00000508502 ZMYM4Q5VZL5 1548 aa12.96□□□□□ -0.34
SEC31A-227ENST00000508502 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
SEC31A-227ENST00000508502 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
SEC31A-227ENST00000508502 SCAPERQ9BY12 1400 aa12.95□□□□□ -0.34
SEC31A-227ENST00000508502 TET3O43151 1660 aa12.95□□□□□ -0.34
SEC31A-227ENST00000508502 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
SEC31A-227ENST00000508502 PLIN1O60240 522 aa12.94□□□□□ -0.34
SEC31A-227ENST00000508502 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.346e-7■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms