RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
HMGN1P16-201ENST00000508308 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
HMGN1P16-201ENST00000508308 REM2Q8IYK8 340 aaPredicted RBP10.39□□□□□ -0.75
HMGN1P16-201ENST00000508308 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
HMGN1P16-201ENST00000508308 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
HMGN1P16-201ENST00000508308 CERKQ8TCT0 537 aa10.38□□□□□ -0.75
HMGN1P16-201ENST00000508308 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
HMGN1P16-201ENST00000508308 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
HMGN1P16-201ENST00000508308 A2MP01023 1474 aa10.37□□□□□ -0.75
HMGN1P16-201ENST00000508308 LOC105371045A0A1W2PR82 267 aa10.36□□□□□ -0.75
HMGN1P16-201ENST00000508308 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
HMGN1P16-201ENST00000508308 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
HMGN1P16-201ENST00000508308 CLTCQ00610 1675 aaKnown RBP10.35□□□□□ -0.75
HMGN1P16-201ENST00000508308 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
HMGN1P16-201ENST00000508308 NPATQ14207 1427 aa10.34□□□□□ -0.75
HMGN1P16-201ENST00000508308 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
HMGN1P16-201ENST00000508308 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
HMGN1P16-201ENST00000508308 PTPRTO14522 1441 aa10.33□□□□□ -0.76
HMGN1P16-201ENST00000508308 PTPRKQ15262 1439 aa10.33□□□□□ -0.76
HMGN1P16-201ENST00000508308 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
HMGN1P16-201ENST00000508308 CAMSAP2Q08AD1 1489 aa10.32□□□□□ -0.76
HMGN1P16-201ENST00000508308 SLC4A2P04920 1241 aa10.32□□□□□ -0.76
HMGN1P16-201ENST00000508308 GGT6Q6P531 493 aa10.32□□□□□ -0.76
HMGN1P16-201ENST00000508308 LTBP4Q8N2S1 1624 aa10.32□□□□□ -0.76
HMGN1P16-201ENST00000508308 DHX29Q7Z478 1369 aaKnown RBP10.31□□□□□ -0.76
HMGN1P16-201ENST00000508308 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
HMGN1P16-201ENST00000508308 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 MYO3AQ8NEV4 1616 aa10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 KANK4Q5T7N3 995 aaPredicted RBP10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 ZNF142P52746 1687 aaPredicted RBP10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
HMGN1P16-201ENST00000508308 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
HMGN1P16-201ENST00000508308 ARHGEF5Q12774 1597 aa10.28□□□□□ -0.76
HMGN1P16-201ENST00000508308 CEP170BQ9Y4F5 1589 aaPredicted RBP10.28□□□□□ -0.76
HMGN1P16-201ENST00000508308 PITPNM1O00562 1244 aa10.28□□□□□ -0.76
HMGN1P16-201ENST00000508308 POLA2Q14181 598 aa10.28□□□□□ -0.76
HMGN1P16-201ENST00000508308 KIF3BO15066 747 aa10.27□□□□□ -0.77
HMGN1P16-201ENST00000508308 FBXO31Q5XUX0 539 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P16-201ENST00000508308 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P16-201ENST00000508308 TCOF1Q13428 1488 aaKnown RBP10.27□□□□□ -0.77
HMGN1P16-201ENST00000508308 PLA2R1Q13018 1463 aa10.26□□□□□ -0.77
HMGN1P16-201ENST00000508308 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
HMGN1P16-201ENST00000508308 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
HMGN1P16-201ENST00000508308 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
HMGN1P16-201ENST00000508308 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
HMGN1P16-201ENST00000508308 KDM5DQ9BY66 1539 aa10.24□□□□□ -0.77
HMGN1P16-201ENST00000508308 MAST1Q9Y2H9 1570 aa10.24□□□□□ -0.77
HMGN1P16-201ENST00000508308 GABBR2O75899 941 aa10.24□□□□□ -0.77
HMGN1P16-201ENST00000508308 ZNF335Q9H4Z2 1342 aaPredicted RBP10.24□□□□□ -0.77
HMGN1P16-201ENST00000508308 PZPP20742 1482 aa10.23□□□□□ -0.77
HMGN1P16-201ENST00000508308 MYOM3Q5VTT5 1437 aa10.23□□□□□ -0.77
HMGN1P16-201ENST00000508308 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
HMGN1P16-201ENST00000508308 RNF17Q9BXT8 1623 aaKnown RBP10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 PKD2Q13563 968 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 WASHC2CQ9Y4E1 1318 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 TNRQ92752 1358 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 NEURL4Q96JN8 1562 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
HMGN1P16-201ENST00000508308 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
HMGN1P16-201ENST00000508308 TSPY10P0CW01 314 aa10.21□□□□□ -0.77
HMGN1P16-201ENST00000508308 MIA2Q96PC5 1412 aa10.21□□□□□ -0.78
HMGN1P16-201ENST00000508308 ABCC3O15438 1527 aa10.2□□□□□ -0.78
HMGN1P16-201ENST00000508308 POLR1AO95602 1720 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P16-201ENST00000508308 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
HMGN1P16-201ENST00000508308 ABCC5O15440 1437 aa10.17□□□□□ -0.78
HMGN1P16-201ENST00000508308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGN1P16-201ENST00000508308 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
HMGN1P16-201ENST00000508308 NLRP1Q9C000 1473 aa10.17□□□□□ -0.78
HMGN1P16-201ENST00000508308 CEP152O94986 1710 aa10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 ZC3H13Q5T200 1668 aaKnown RBP10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 PTPN23Q9H3S7 1636 aa10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 CFAP65Q6ZU64 1925 aaKnown RBP10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 DUOX2Q9NRD8 1548 aa10.16□□□□□ -0.78
HMGN1P16-201ENST00000508308 VWDEQ8N2E2 1590 aa10.15□□□□□ -0.78
HMGN1P16-201ENST00000508308 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.78
HMGN1P16-201ENST00000508308 MED14O60244 1454 aa10.15□□□□□ -0.78
HMGN1P16-201ENST00000508308 ERVK-7P63135 1459 aa10.15□□□□□ -0.78
HMGN1P16-201ENST00000508308 SHANK2Q9UPX8 1470 aa10.15□□□□□ -0.78
HMGN1P16-201ENST00000508308 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 C19orf67A6NJJ6 358 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 ILDR2Q71H61 639 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 THEMISQ8N1K5 641 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 DAPK1P53355 1430 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 FGD6Q6ZV73 1430 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
HMGN1P16-201ENST00000508308 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P16-201ENST00000508308 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
HMGN1P16-201ENST00000508308 ANKLE2Q86XL3 938 aa10.13□□□□□ -0.79
HMGN1P16-201ENST00000508308 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
HMGN1P16-201ENST00000508308 STRCP1A6NGW2 1772 aa10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 NPHP4O75161 1426 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 ARHGAP31Q2M1Z3 1444 aa10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 ERBINQ96RT1 1412 aa10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 UBR1Q8IWV7 1749 aa10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 DISP3Q9P2K9 1392 aa10.12□□□□□ -0.79
HMGN1P16-201ENST00000508308 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
HMGN1P16-201ENST00000508308 CPS1P31327 1500 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms