RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 TCOF1Q13428 1488 aaKnown RBP14.48□□□□□ -0.09
DDX41-209ENST00000508279 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
DDX41-209ENST00000508279 PPP6R1Q9UPN7 881 aa14.45□□□□□ -0.1
DDX41-209ENST00000508279 KIF15Q9NS87 1388 aa14.45□□□□□ -0.1
DDX41-209ENST00000508279 CFAP65Q6ZU64 1925 aaKnown RBP14.45□□□□□ -0.1
DDX41-209ENST00000508279 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
DDX41-209ENST00000508279 DUOX2Q9NRD8 1548 aa14.44□□□□□ -0.1
DDX41-209ENST00000508279 KDM5DQ9BY66 1539 aa14.43□□□□□ -0.1
DDX41-209ENST00000508279 EIF2AK4Q9P2K8 1649 aaKnown RBP14.43□□□□□ -0.1
DDX41-209ENST00000508279 CEP152O94986 1710 aa14.42□□□□□ -0.1
DDX41-209ENST00000508279 ITGAEP38570 1179 aa14.42□□□□□ -0.1
DDX41-209ENST00000508279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.15e-7■■■■□ 19.6
DDX41-209ENST00000508279 ANKRD30AQ9BXX3 1397 aa14.42□□□□□ -0.1
DDX41-209ENST00000508279 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
DDX41-209ENST00000508279 NPATQ14207 1427 aa14.41□□□□□ -0.1
DDX41-209ENST00000508279 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
DDX41-209ENST00000508279 MYO3AQ8NEV4 1616 aa14.4□□□□□ -0.1
DDX41-209ENST00000508279 FBXO31Q5XUX0 539 aaPredicted RBP14.39□□□□□ -0.11
DDX41-209ENST00000508279 STRCQ7RTU9 1775 aa14.38□□□□□ -0.11
DDX41-209ENST00000508279 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
DDX41-209ENST00000508279 ZC3H13Q5T200 1668 aaKnown RBP14.37□□□□□ -0.11
DDX41-209ENST00000508279 MROH1Q8NDA8 1641 aa14.37□□□□□ -0.11
DDX41-209ENST00000508279 ABCC3O15438 1527 aa14.36□□□□□ -0.11
DDX41-209ENST00000508279 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
DDX41-209ENST00000508279 NCOA1Q15788 1441 aa14.36□□□□□ -0.11
DDX41-209ENST00000508279 PZPP20742 1482 aa14.36□□□□□ -0.11
DDX41-209ENST00000508279 TNRQ92752 1358 aa14.35□□□□□ -0.11
DDX41-209ENST00000508279 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
DDX41-209ENST00000508279 CAMSAP1Q5T5Y3 1602 aa14.35□□□□□ -0.11
DDX41-209ENST00000508279 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
DDX41-209ENST00000508279 ADGRL2O95490 1459 aa14.34□□□□□ -0.11
DDX41-209ENST00000508279 KANK1Q14678 1352 aa14.34□□□□□ -0.11
DDX41-209ENST00000508279 PRDM15P57071 1507 aaPredicted RBP14.32□□□□□ -0.12
DDX41-209ENST00000508279 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
DDX41-209ENST00000508279 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
DDX41-209ENST00000508279 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
DDX41-209ENST00000508279 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
DDX41-209ENST00000508279 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
DDX41-209ENST00000508279 ERVK-7P63135 1459 aa14.28□□□□□ -0.12
DDX41-209ENST00000508279 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
DDX41-209ENST00000508279 SPATA31D1Q6ZQQ2 1576 aa14.27□□□□□ -0.12
DDX41-209ENST00000508279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX41-209ENST00000508279 UGGT1Q9NYU2 1555 aa14.26□□□□□ -0.13
DDX41-209ENST00000508279 NLRP1Q9C000 1473 aa14.25□□□□□ -0.13
DDX41-209ENST00000508279 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
DDX41-209ENST00000508279 ROCK1Q13464 1354 aa14.25□□□□□ -0.13
DDX41-209ENST00000508279 PTPRTO14522 1441 aa14.24□□□□□ -0.13
DDX41-209ENST00000508279 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
DDX41-209ENST00000508279 PKD2Q13563 968 aa14.24□□□□□ -0.13
DDX41-209ENST00000508279 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
DDX41-209ENST00000508279 PLA2R1Q13018 1463 aa14.24□□□□□ -0.13
DDX41-209ENST00000508279 VWDEQ8N2E2 1590 aa14.23□□□□□ -0.13
DDX41-209ENST00000508279 ARHGAP31Q2M1Z3 1444 aa14.23□□□□□ -0.13
DDX41-209ENST00000508279 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
DDX41-209ENST00000508279 UNC13BO14795 1591 aa14.22□□□□□ -0.13
DDX41-209ENST00000508279 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
DDX41-209ENST00000508279 LMTK2Q8IWU2 1503 aa14.21□□□□□ -0.13
DDX41-209ENST00000508279 FOXD1Q16676 465 aa14.21□□□□□ -0.13
DDX41-209ENST00000508279 ANKLE2Q86XL3 938 aa14.21□□□□□ -0.13
DDX41-209ENST00000508279 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
DDX41-209ENST00000508279 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.14
DDX41-209ENST00000508279 TET3O43151 1660 aa14.2□□□□□ -0.14
DDX41-209ENST00000508279 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
DDX41-209ENST00000508279 PIK3C2BO00750 1634 aa14.19□□□□□ -0.14
DDX41-209ENST00000508279 NUP155O75694 1391 aa14.19□□□□□ -0.14
DDX41-209ENST00000508279 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
DDX41-209ENST00000508279 SYNMO15061 1565 aa14.17□□□□□ -0.14
DDX41-209ENST00000508279 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
DDX41-209ENST00000508279 IQGAP3Q86VI3 1631 aa14.17□□□□□ -0.14
DDX41-209ENST00000508279 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
DDX41-209ENST00000508279 E9PCH4 1651 aa14.17□□□□□ -0.14
DDX41-209ENST00000508279 IDI1Q13907 227 aa14.16□□□□□ -0.14
DDX41-209ENST00000508279 MYO5BQ9ULV0 1848 aa14.15□□□□□ -0.14
DDX41-209ENST00000508279 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
DDX41-209ENST00000508279 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
DDX41-209ENST00000508279 CHGAP10645 457 aaKnown RBP14.14□□□□□ -0.15
DDX41-209ENST00000508279 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
DDX41-209ENST00000508279 NOS1P29475 1434 aa14.14□□□□□ -0.15
DDX41-209ENST00000508279 NAIPQ13075 1403 aa14.14□□□□□ -0.15
DDX41-209ENST00000508279 RPRD2Q5VT52 1461 aaKnown RBP14.13□□□□□ -0.15
DDX41-209ENST00000508279 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
DDX41-209ENST00000508279 TXNDC2Q86VQ3 553 aa14.13□□□□□ -0.15
DDX41-209ENST00000508279 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
DDX41-209ENST00000508279 LTKP29376 864 aa14.11□□□□□ -0.15
DDX41-209ENST00000508279 SLC52A1Q9NWF4 448 aa14.11□□□□□ -0.15
DDX41-209ENST00000508279 SCAF11Q99590 1463 aaKnown RBP14.11□□□□□ -0.15
DDX41-209ENST00000508279 ADGRB3O60242 1522 aa14.1□□□□□ -0.15
DDX41-209ENST00000508279 SLIT1O75093 1534 aa14.1□□□□□ -0.15
DDX41-209ENST00000508279 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
DDX41-209ENST00000508279 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
DDX41-209ENST00000508279 BCANQ96GW7 911 aa14.09□□□□□ -0.15
DDX41-209ENST00000508279 MED14O60244 1454 aa14.09□□□□□ -0.15
DDX41-209ENST00000508279 KDM5AP29375 1690 aaKnown RBP14.09□□□□□ -0.15
DDX41-209ENST00000508279 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
DDX41-209ENST00000508279 SPHKAPQ2M3C7 1700 aa14.08□□□□□ -0.16
DDX41-209ENST00000508279 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
DDX41-209ENST00000508279 TMEM131LA2VDJ0 1609 aa14.05□□□□□ -0.16
DDX41-209ENST00000508279 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
DDX41-209ENST00000508279 STRCP1A6NGW2 1772 aa14.04□□□□□ -0.16
DDX41-209ENST00000508279 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms