RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
TRIO-209ENST00000507714 KIF3BO15066 747 aa13.35□□□□□ -0.27
TRIO-209ENST00000507714 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
TRIO-209ENST00000507714 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
TRIO-209ENST00000507714 AGLP35573 1532 aa13.34□□□□□ -0.27
TRIO-209ENST00000507714 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
TRIO-209ENST00000507714 KANK1Q14678 1352 aa13.33□□□□□ -0.27
TRIO-209ENST00000507714 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
TRIO-209ENST00000507714 GGT6Q6P531 493 aa13.33□□□□□ -0.28
TRIO-209ENST00000507714 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
TRIO-209ENST00000507714 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
TRIO-209ENST00000507714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.284e-7■□□□□ 11.1
TRIO-209ENST00000507714 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
TRIO-209ENST00000507714 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
TRIO-209ENST00000507714 PTPRMP28827 1452 aa13.3□□□□□ -0.28
TRIO-209ENST00000507714 NUP155O75694 1391 aa13.29□□□□□ -0.28
TRIO-209ENST00000507714 SIGLEC1Q9BZZ2 1709 aa13.28□□□□□ -0.28
TRIO-209ENST00000507714 UNC13BO14795 1591 aa13.28□□□□□ -0.28
TRIO-209ENST00000507714 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
TRIO-209ENST00000507714 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
TRIO-209ENST00000507714 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
TRIO-209ENST00000507714 WASHC2CQ9Y4E1 1318 aa13.26□□□□□ -0.29
TRIO-209ENST00000507714 FAM135AQ9P2D6 1515 aa13.25□□□□□ -0.29
TRIO-209ENST00000507714 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
TRIO-209ENST00000507714 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
TRIO-209ENST00000507714 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
TRIO-209ENST00000507714 IQGAP3Q86VI3 1631 aa13.23□□□□□ -0.29
TRIO-209ENST00000507714 MROH2AA6NES4 1674 aa13.22□□□□□ -0.29
TRIO-209ENST00000507714 ZC3H13Q5T200 1668 aaKnown RBP13.22□□□□□ -0.29
TRIO-209ENST00000507714 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.29
TRIO-209ENST00000507714 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
TRIO-209ENST00000507714 TET3O43151 1660 aa13.2□□□□□ -0.3
TRIO-209ENST00000507714 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
TRIO-209ENST00000507714 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
TRIO-209ENST00000507714 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
TRIO-209ENST00000507714 C3P01024 1663 aa13.19□□□□□ -0.3
TRIO-209ENST00000507714 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
TRIO-209ENST00000507714 PKD2Q13563 968 aa13.19□□□□□ -0.3
TRIO-209ENST00000507714 CEP152O94986 1710 aa13.19□□□□□ -0.3
TRIO-209ENST00000507714 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
TRIO-209ENST00000507714 ABCC3O15438 1527 aa13.18□□□□□ -0.3
TRIO-209ENST00000507714 PZPP20742 1482 aa13.17□□□□□ -0.3
TRIO-209ENST00000507714 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
TRIO-209ENST00000507714 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
TRIO-209ENST00000507714 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
TRIO-209ENST00000507714 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
TRIO-209ENST00000507714 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
TRIO-209ENST00000507714 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
TRIO-209ENST00000507714 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
TRIO-209ENST00000507714 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
TRIO-209ENST00000507714 NPATQ14207 1427 aa13.15□□□□□ -0.3
TRIO-209ENST00000507714 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
TRIO-209ENST00000507714 EFCAB6Q5THR3 1501 aa13.14□□□□□ -0.31
TRIO-209ENST00000507714 E9PCH4 1651 aa13.13□□□□□ -0.31
TRIO-209ENST00000507714 FOXD1Q16676 465 aa13.1□□□□□ -0.31
TRIO-209ENST00000507714 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
TRIO-209ENST00000507714 TNRQ92752 1358 aa13.09□□□□□ -0.31
TRIO-209ENST00000507714 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
TRIO-209ENST00000507714 SLC52A1Q9NWF4 448 aa13.08□□□□□ -0.32
TRIO-209ENST00000507714 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
TRIO-209ENST00000507714 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
TRIO-209ENST00000507714 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
TRIO-209ENST00000507714 PTPRTO14522 1441 aa13.06□□□□□ -0.32
TRIO-209ENST00000507714 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
TRIO-209ENST00000507714 HSPA2P54652 639 aa13.06□□□□□ -0.32
TRIO-209ENST00000507714 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
TRIO-209ENST00000507714 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
TRIO-209ENST00000507714 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
TRIO-209ENST00000507714 NOS1P29475 1434 aa13.05□□□□□ -0.32
TRIO-209ENST00000507714 ERVK-7P63135 1459 aa13.05□□□□□ -0.32
TRIO-209ENST00000507714 TRPM2O94759 1503 aa13.05□□□□□ -0.32
TRIO-209ENST00000507714 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
TRIO-209ENST00000507714 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
TRIO-209ENST00000507714 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
TRIO-209ENST00000507714 KIF1BO60333 1816 aa13.04□□□□□ -0.32
TRIO-209ENST00000507714 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
TRIO-209ENST00000507714 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
TRIO-209ENST00000507714 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.32
TRIO-209ENST00000507714 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
TRIO-209ENST00000507714 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
TRIO-209ENST00000507714 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
TRIO-209ENST00000507714 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
TRIO-209ENST00000507714 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
TRIO-209ENST00000507714 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
TRIO-209ENST00000507714 TONSLQ96HA7 1378 aa13□□□□□ -0.33
TRIO-209ENST00000507714 IDI1Q13907 227 aa13□□□□□ -0.33
TRIO-209ENST00000507714 SYNMO15061 1565 aa12.99□□□□□ -0.33
TRIO-209ENST00000507714 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
TRIO-209ENST00000507714 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
TRIO-209ENST00000507714 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
TRIO-209ENST00000507714 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
TRIO-209ENST00000507714 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
TRIO-209ENST00000507714 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
TRIO-209ENST00000507714 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
TRIO-209ENST00000507714 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
TRIO-209ENST00000507714 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
TRIO-209ENST00000507714 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.34
TRIO-209ENST00000507714 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
TRIO-209ENST00000507714 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
TRIO-209ENST00000507714 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms