RNA–Protein interactions for RNA: ENST00000507676.5

SEC31A-222, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-222	ENST00000507676	DEPDC5	O75140	1603 aa		11.38	□□□□□ -0.59
SEC31A-222	ENST00000507676	HFM1	A2PYH4	1435 aa		11.38	□□□□□ -0.59
SEC31A-222	ENST00000507676	PRDM15	P57071	1507 aa	Predicted RBP	11.38	□□□□□ -0.59
SEC31A-222	ENST00000507676	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.37	□□□□□ -0.59
SEC31A-222	ENST00000507676	ANKRD50	Q9ULJ7	1429 aa		11.37	□□□□□ -0.59
SEC31A-222	ENST00000507676	MSH5	O43196	834 aa		11.37	□□□□□ -0.59
SEC31A-222	ENST00000507676	MLEC	Q14165	292 aa		11.37	□□□□□ -0.59
SEC31A-222	ENST00000507676	UNC13B	O14795	1591 aa		11.36	□□□□□ -0.59
SEC31A-222	ENST00000507676	VWDE	Q8N2E2	1590 aa		11.36	□□□□□ -0.59
SEC31A-222	ENST00000507676	RIMS1	Q86UR5	1692 aa	Known RBP	11.36	□□□□□ -0.59
SEC31A-222	ENST00000507676	FER1L4	A9Z1Z3	1794 aa		11.36	□□□□□ -0.59
SEC31A-222	ENST00000507676	ABCC3	O15438	1527 aa		11.35	□□□□□ -0.59
SEC31A-222	ENST00000507676	KIF3B	O15066	747 aa		11.34	□□□□□ -0.59
SEC31A-222	ENST00000507676	KDM5D	Q9BY66	1539 aa		11.34	□□□□□ -0.59
SEC31A-222	ENST00000507676	CLTC	Q00610	1675 aa	Known RBP	11.33	□□□□□ -0.6
SEC31A-222	ENST00000507676	PTPRM	P28827	1452 aa		11.32	□□□□□ -0.6
SEC31A-222	ENST00000507676	FAM135A	Q9P2D6	1515 aa		11.32	□□□□□ -0.6
SEC31A-222	ENST00000507676	CEP152	O94986	1710 aa		11.32	□□□□□ -0.6
SEC31A-222	ENST00000507676	GGT6	Q6P531	493 aa		11.31	□□□□□ -0.6
SEC31A-222	ENST00000507676	LMTK2	Q8IWU2	1503 aa		11.3	□□□□□ -0.6
SEC31A-222	ENST00000507676	MROH2A	A6NES4	1674 aa		11.3	□□□□□ -0.6
SEC31A-222	ENST00000507676	ZC3H13	Q5T200	1668 aa	Known RBP	11.3	□□□□□ -0.6
SEC31A-222	ENST00000507676	CAMSAP1	Q5T5Y3	1602 aa		11.29	□□□□□ -0.6
SEC31A-222	ENST00000507676	IQGAP3	Q86VI3	1631 aa		11.29	□□□□□ -0.6
SEC31A-222	ENST00000507676	C3	P01024	1663 aa		11.29	□□□□□ -0.6
SEC31A-222	ENST00000507676	CNTLN	Q9NXG0	1405 aa		11.28	□□□□□ -0.6
SEC31A-222	ENST00000507676	PZP	P20742	1482 aa		11.28	□□□□□ -0.6
SEC31A-222	ENST00000507676	EFCAB6	Q5THR3	1501 aa		11.28	□□□□□ -0.6
SEC31A-222	ENST00000507676	SETD5	Q9C0A6	1442 aa		11.27	□□□□□ -0.6
SEC31A-222	ENST00000507676	RAB3GAP2	Q9H2M9	1393 aa		11.27	□□□□□ -0.61
SEC31A-222	ENST00000507676	NPAT	Q14207	1427 aa		11.26	□□□□□ -0.61
SEC31A-222	ENST00000507676	CEBPA	P49715	358 aa	Predicted RBP	11.26	□□□□□ -0.61
SEC31A-222	ENST00000507676	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.26	□□□□□ -0.61	1e-6	■□□□□ 9.6
SEC31A-222	ENST00000507676	TET3	O43151	1660 aa		11.25	□□□□□ -0.61
SEC31A-222	ENST00000507676	ZMYM3	Q14202	1370 aa		11.25	□□□□□ -0.61
SEC31A-222	ENST00000507676	TRIM26	Q12899	539 aa	Predicted RBP	11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	WASHC2C	Q9Y4E1	1318 aa		11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	NUP155	O75694	1391 aa		11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	ARHGAP31	Q2M1Z3	1444 aa		11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	ERVK-7	P63135	1459 aa		11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	SPATA31D1	Q6ZQQ2	1576 aa		11.24	□□□□□ -0.61
SEC31A-222	ENST00000507676	PPP6R1	Q9UPN7	881 aa		11.23	□□□□□ -0.61
SEC31A-222	ENST00000507676		E9PCH4	1651 aa		11.23	□□□□□ -0.61
SEC31A-222	ENST00000507676	SYNM	O15061	1565 aa		11.22	□□□□□ -0.61
SEC31A-222	ENST00000507676	KANK1	Q14678	1352 aa		11.22	□□□□□ -0.61
SEC31A-222	ENST00000507676	PLPPR3	Q6T4P5	718 aa		11.22	□□□□□ -0.61
SEC31A-222	ENST00000507676	PREX1	Q8TCU6	1659 aa		11.21	□□□□□ -0.61
SEC31A-222	ENST00000507676	MYO3A	Q8NEV4	1616 aa		11.21	□□□□□ -0.61
SEC31A-222	ENST00000507676	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.21	□□□□□ -0.61
SEC31A-222	ENST00000507676	NOS1	P29475	1434 aa		11.2	□□□□□ -0.62
SEC31A-222	ENST00000507676	LMTK3	Q96Q04	1460 aa		11.19	□□□□□ -0.62
SEC31A-222	ENST00000507676	ESF1	Q9H501	851 aa	Known RBP	11.19	□□□□□ -0.62
SEC31A-222	ENST00000507676	UGGT1	Q9NYU2	1555 aa		11.19	□□□□□ -0.62
SEC31A-222	ENST00000507676	PLA2R1	Q13018	1463 aa		11.19	□□□□□ -0.62
SEC31A-222	ENST00000507676	RPRD2	Q5VT52	1461 aa	Known RBP	11.19	□□□□□ -0.62
SEC31A-222	ENST00000507676	TNR	Q92752	1358 aa		11.17	□□□□□ -0.62
SEC31A-222	ENST00000507676	TRIM52	Q96A61	297 aa		11.17	□□□□□ -0.62
SEC31A-222	ENST00000507676	ZNF142	P52746	1687 aa	Predicted RBP	11.17	□□□□□ -0.62
SEC31A-222	ENST00000507676	PTPRT	O14522	1441 aa		11.17	□□□□□ -0.62
SEC31A-222	ENST00000507676	PIK3C2B	O00750	1634 aa		11.16	□□□□□ -0.62
SEC31A-222	ENST00000507676	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.16	□□□□□ -0.62
SEC31A-222	ENST00000507676	TRPM2	O94759	1503 aa		11.15	□□□□□ -0.62
SEC31A-222	ENST00000507676	SPHKAP	Q2M3C7	1700 aa		11.15	□□□□□ -0.63
SEC31A-222	ENST00000507676	CLTCL1	P53675	1640 aa		11.14	□□□□□ -0.63
SEC31A-222	ENST00000507676	PKD2	Q13563	968 aa		11.14	□□□□□ -0.63
SEC31A-222	ENST00000507676	MPHOSPH9	Q99550	1183 aa		11.14	□□□□□ -0.63
SEC31A-222	ENST00000507676	PCGF6	Q9BYE7	350 aa		11.14	□□□□□ -0.63
SEC31A-222	ENST00000507676	A2ML1	A8K2U0	1454 aa		11.13	□□□□□ -0.63
SEC31A-222	ENST00000507676	UHRF1BP1	Q6BDS2	1440 aa		11.13	□□□□□ -0.63
SEC31A-222	ENST00000507676	HRC	P23327	699 aa		11.13	□□□□□ -0.63
SEC31A-222	ENST00000507676	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.13	□□□□□ -0.63
SEC31A-222	ENST00000507676	NLRP1	Q9C000	1473 aa		11.12	□□□□□ -0.63
SEC31A-222	ENST00000507676	ADGRB3	O60242	1522 aa		11.12	□□□□□ -0.63
SEC31A-222	ENST00000507676	DHX57	Q6P158	1386 aa	Known RBP	11.11	□□□□□ -0.63
SEC31A-222	ENST00000507676	CFAP65	Q6ZU64	1925 aa	Known RBP	11.11	□□□□□ -0.63
SEC31A-222	ENST00000507676	UBR1	Q8IWV7	1749 aa		11.1	□□□□□ -0.63
SEC31A-222	ENST00000507676	HSPA2	P54652	639 aa		11.09	□□□□□ -0.63
SEC31A-222	ENST00000507676	TMEM131L	A2VDJ0	1609 aa		11.09	□□□□□ -0.63
SEC31A-222	ENST00000507676	ANKRD30B	Q9BXX2	1392 aa		11.08	□□□□□ -0.64
SEC31A-222	ENST00000507676	IDI1	Q13907	227 aa		11.08	□□□□□ -0.64
SEC31A-222	ENST00000507676	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.07	□□□□□ -0.64
SEC31A-222	ENST00000507676	NEURL4	Q96JN8	1562 aa		11.07	□□□□□ -0.64
SEC31A-222	ENST00000507676	SETD1B	Q9UPS6	1966 aa	Known RBP	11.07	□□□□□ -0.64
SEC31A-222	ENST00000507676	ARHGAP23	Q9P227	1491 aa		11.06	□□□□□ -0.64
SEC31A-222	ENST00000507676	KDM5A	P29375	1690 aa	Known RBP	11.06	□□□□□ -0.64
SEC31A-222	ENST00000507676	ACIN1	Q9UKV3	1341 aa	Known RBP	11.06	□□□□□ -0.64
SEC31A-222	ENST00000507676	SLIT1	O75093	1534 aa		11.05	□□□□□ -0.64
SEC31A-222	ENST00000507676	MYO5B	Q9ULV0	1848 aa		11.05	□□□□□ -0.64
SEC31A-222	ENST00000507676	ZFYVE9	O95405	1425 aa		11.05	□□□□□ -0.64
SEC31A-222	ENST00000507676	SPATA31E1	Q6ZUB1	1445 aa		11.05	□□□□□ -0.64
SEC31A-222	ENST00000507676	STRC	Q7RTU9	1775 aa		11.04	□□□□□ -0.64
SEC31A-222	ENST00000507676	CCDC144A	A2RUR9	1427 aa		11.03	□□□□□ -0.64
SEC31A-222	ENST00000507676	SLC52A1	Q9NWF4	448 aa		11.03	□□□□□ -0.64
SEC31A-222	ENST00000507676	NEXMIF	Q5QGS0	1516 aa		11.03	□□□□□ -0.64
SEC31A-222	ENST00000507676	TMEM2	Q9UHN6	1383 aa		11.03	□□□□□ -0.64
SEC31A-222	ENST00000507676	POLR1A	O95602	1720 aa	Predicted RBP	11.01	□□□□□ -0.65
SEC31A-222	ENST00000507676	RIMS2	Q9UQ26	1411 aa		11.01	□□□□□ -0.65
SEC31A-222	ENST00000507676	SCAF11	Q99590	1463 aa	Known RBP	11	□□□□□ -0.65
SEC31A-222	ENST00000507676	LTK	P29376	864 aa		11	□□□□□ -0.65
SEC31A-222	ENST00000507676	NCKAP5L	Q9HCH0	1330 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms