RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 ATP10AO60312 1499 aa35.48■■■■□ 3.27
DHFR-203ENST00000505337 RPRD2Q5VT52 1461 aaKnown RBP35.44■■■■□ 3.26
DHFR-203ENST00000505337 BCORL1Q5H9F3 1711 aa35.43■■■■□ 3.26
DHFR-203ENST00000505337 ADAMTSL3P82987 1691 aa35.43■■■■□ 3.26
DHFR-203ENST00000505337 UNC13BO14795 1591 aa35.43■■■■□ 3.26
DHFR-203ENST00000505337 MYT1LQ9UL68 1186 aa35.43■■■■□ 3.26
DHFR-203ENST00000505337 DIP2CQ9Y2E4 1556 aa35.41■■■■□ 3.26
DHFR-203ENST00000505337 SLC4A1APQ9BWU0 796 aaKnown RBP35.4■■■■□ 3.26
DHFR-203ENST00000505337 KIDINS220Q9ULH0 1771 aa35.39■■■■□ 3.26
DHFR-203ENST00000505337 ABCA6Q8N139 1617 aa35.39■■■■□ 3.26
DHFR-203ENST00000505337 FOXD1Q16676 465 aa35.36■■■■□ 3.25
DHFR-203ENST00000505337 SPAG9O60271 1321 aaKnown RBP35.34■■■■□ 3.25
DHFR-203ENST00000505337 DUOX2Q9NRD8 1548 aa35.33■■■■□ 3.25
DHFR-203ENST00000505337 REREQ9P2R6 1566 aa35.31■■■■□ 3.24
DHFR-203ENST00000505337 MADDQ8WXG6 1647 aa35.31■■■■□ 3.24
DHFR-203ENST00000505337 INO80Q9ULG1 1556 aaPredicted RBP35.28■■■■□ 3.24
DHFR-203ENST00000505337 ATP7AQ04656 1500 aa35.27■■■■□ 3.24
DHFR-203ENST00000505337 IQGAP3Q86VI3 1631 aa35.27■■■■□ 3.24
DHFR-203ENST00000505337 MLECQ14165 292 aa35.27■■■■□ 3.24
DHFR-203ENST00000505337 NUP155O75694 1391 aa35.27■■■■□ 3.24
DHFR-203ENST00000505337 FAM135AQ9P2D6 1515 aa35.27■■■■□ 3.24
DHFR-203ENST00000505337 PTPRMP28827 1452 aa35.26■■■■□ 3.23
DHFR-203ENST00000505337 ERBINQ96RT1 1412 aa35.24■■■■□ 3.23
DHFR-203ENST00000505337 RTEL1-TNFRSF6BF6WH68 1400 aa35.21■■■■□ 3.23
DHFR-203ENST00000505337 AGLP35573 1532 aa35.2■■■■□ 3.23
DHFR-203ENST00000505337 PKD2Q13563 968 aa35.19■■■■□ 3.22
DHFR-203ENST00000505337 RIMS1Q86UR5 1692 aaKnown RBP35.18■■■■□ 3.22
DHFR-203ENST00000505337 MIER1Q8N108 512 aa35.14■■■■□ 3.22
DHFR-203ENST00000505337 L3MBTL2Q969R5 705 aa35.14■■■■□ 3.22
DHFR-203ENST00000505337 FER1L4A9Z1Z3 1794 aa35.12■■■■□ 3.21
DHFR-203ENST00000505337 DEPDC5O75140 1603 aa35.11■■■■□ 3.21
DHFR-203ENST00000505337 A2MP01023 1474 aa35.11■■■■□ 3.21
DHFR-203ENST00000505337 EIF2AK4Q9P2K8 1649 aaKnown RBP35.05■■■■□ 3.2
DHFR-203ENST00000505337 DHX29Q7Z478 1369 aaKnown RBP35.01■■■■□ 3.19
DHFR-203ENST00000505337 PLPPR3Q6T4P5 718 aa34.98■■■■□ 3.19
DHFR-203ENST00000505337 POLR1AO95602 1720 aaPredicted RBP34.95■■■■□ 3.19
DHFR-203ENST00000505337 CEBPAP49715 358 aaPredicted RBP34.94■■■■□ 3.18
DHFR-203ENST00000505337 E9PCH4 1651 aa34.93■■■■□ 3.18
DHFR-203ENST00000505337 NBPF8Q3BBV2 869 aa34.92■■■■□ 3.18
DHFR-203ENST00000505337 HIRIP3Q9BW71 556 aaPredicted RBP34.91■■■■□ 3.18
DHFR-203ENST00000505337 VWDEQ8N2E2 1590 aa34.91■■■■□ 3.18
DHFR-203ENST00000505337 PLA2R1Q13018 1463 aa34.9■■■■□ 3.18
DHFR-203ENST00000505337 GGT6Q6P531 493 aa34.89■■■■□ 3.18
DHFR-203ENST00000505337 TET3O43151 1660 aa34.89■■■■□ 3.18
DHFR-203ENST00000505337 MROH1Q8NDA8 1641 aa34.89■■■■□ 3.18
DHFR-203ENST00000505337 ESF1Q9H501 851 aaKnown RBP34.89■■■■□ 3.18
DHFR-203ENST00000505337 UHRF1BP1Q6BDS2 1440 aa34.89■■■■□ 3.18
DHFR-203ENST00000505337 PRDM15P57071 1507 aaPredicted RBP34.88■■■■□ 3.17
DHFR-203ENST00000505337 CNTLNQ9NXG0 1405 aa34.87■■■■□ 3.17
DHFR-203ENST00000505337 SPHKAPQ2M3C7 1700 aa34.84■■■■□ 3.17
DHFR-203ENST00000505337 KIF3BO15066 747 aa34.84■■■■□ 3.17
DHFR-203ENST00000505337 C3P01024 1663 aa34.84■■■■□ 3.17
DHFR-203ENST00000505337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.84■■■■□ 3.174e-9■□□□□ 9.5
DHFR-203ENST00000505337 CCDC144AA2RUR9 1427 aa34.83■■■■□ 3.17
DHFR-203ENST00000505337 LMTK3Q96Q04 1460 aa34.82■■■■□ 3.16
DHFR-203ENST00000505337 HSPA5P11021 654 aaKnown RBP34.81■■■■□ 3.16
DHFR-203ENST00000505337 RNF17Q9BXT8 1623 aaKnown RBP34.81■■■■□ 3.16
DHFR-203ENST00000505337 PPP6R1Q9UPN7 881 aa34.81■■■■□ 3.16
DHFR-203ENST00000505337 RALGAPBQ86X10 1494 aa34.8■■■■□ 3.16
DHFR-203ENST00000505337 EIF4G2P78344 907 aaKnown RBP eCLIP34.8■■■■□ 3.16
DHFR-203ENST00000505337 SPATA31E1Q6ZUB1 1445 aa34.79■■■■□ 3.16
DHFR-203ENST00000505337 DDX10Q13206 875 aaKnown RBP34.78■■■■□ 3.16
DHFR-203ENST00000505337 CLTCQ00610 1675 aaKnown RBP34.78■■■■□ 3.16
DHFR-203ENST00000505337 ZMYM3Q14202 1370 aa34.78■■■■□ 3.16
DHFR-203ENST00000505337 MROH2AA6NES4 1674 aa34.78■■■■□ 3.16
DHFR-203ENST00000505337 CEP152O94986 1710 aa34.76■■■■□ 3.16
DHFR-203ENST00000505337 TRPM2O94759 1503 aa34.75■■■■□ 3.15
DHFR-203ENST00000505337 TRPM1Q7Z4N2 1603 aa34.71■■■■□ 3.15
DHFR-203ENST00000505337 PREX1Q8TCU6 1659 aa34.68■■■■□ 3.14
DHFR-203ENST00000505337 SETD1BQ9UPS6 1966 aaKnown RBP34.66■■■■□ 3.14
DHFR-203ENST00000505337 CENPBP07199 599 aaPredicted RBP34.66■■■■□ 3.14
DHFR-203ENST00000505337 EFCAB6Q5THR3 1501 aa34.66■■■■□ 3.14
DHFR-203ENST00000505337 PTPRTO14522 1441 aa34.65■■■■□ 3.14
DHFR-203ENST00000505337 KANK1Q14678 1352 aa34.65■■■■□ 3.14
DHFR-203ENST00000505337 CLTCL1P53675 1640 aa34.65■■■■□ 3.14
DHFR-203ENST00000505337 HSPA2P54652 639 aa34.65■■■■□ 3.14
DHFR-203ENST00000505337 WASHC2AQ641Q2 1341 aa34.64■■■■□ 3.14
DHFR-203ENST00000505337 LMTK2Q8IWU2 1503 aa34.64■■■■□ 3.14
DHFR-203ENST00000505337 WASHC2CQ9Y4E1 1318 aa34.64■■■■□ 3.14
DHFR-203ENST00000505337 NPATQ14207 1427 aa34.63■■■■□ 3.13
DHFR-203ENST00000505337 PRAG1Q86YV5 1406 aa34.61■■■■□ 3.13
DHFR-203ENST00000505337 LAMC1P11047 1609 aa34.6■■■■□ 3.13
DHFR-203ENST00000505337 USP47Q96K76 1375 aa34.58■■■■□ 3.13
DHFR-203ENST00000505337 NEURL4Q96JN8 1562 aa34.57■■■■□ 3.12
DHFR-203ENST00000505337 CCDC7Q96M83 1385 aa34.56■■■■□ 3.12
DHFR-203ENST00000505337 ZNF326Q5BKZ1 582 aaKnown RBP34.56■■■■□ 3.12
DHFR-203ENST00000505337 YTHDC1Q96MU7 727 aaKnown RBP34.56■■■■□ 3.12
DHFR-203ENST00000505337 DCAF11Q8TEB1 546 aa34.55■■■■□ 3.12
DHFR-203ENST00000505337 ABCC3O15438 1527 aa34.55■■■■□ 3.12
DHFR-203ENST00000505337 FBXO31Q5XUX0 539 aaPredicted RBP34.51■■■■□ 3.12
DHFR-203ENST00000505337 ZC3H13Q5T200 1668 aaKnown RBP34.5■■■■□ 3.11
DHFR-203ENST00000505337 KIF1BO60333 1816 aa34.49■■■■□ 3.11
DHFR-203ENST00000505337 C11orf95C9JLR9 678 aaPredicted RBP34.48■■■■□ 3.11
DHFR-203ENST00000505337 KDM2AQ9Y2K7 1162 aa34.47■■■■□ 3.11
DHFR-203ENST00000505337 CAMSAP1Q5T5Y3 1602 aa34.44■■■■□ 3.1
DHFR-203ENST00000505337 GPRASP1Q5JY77 1395 aa34.44■■■■□ 3.1
DHFR-203ENST00000505337 MYO3AQ8NEV4 1616 aa34.44■■■■□ 3.1
DHFR-203ENST00000505337 IFT172Q9UG01 1749 aa34.43■■■■□ 3.1
DHFR-203ENST00000505337 ANP32CO43423 234 aa34.42■■■■□ 3.1
DHFR-203ENST00000505337 KIF7Q2M1P5 1343 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms