RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 MYBBP1AQ9BQG0 1328 aaKnown RBP12.13□□□□□ -0.47
CAST-213ENST00000504465 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
CAST-213ENST00000504465 RALBP1Q15311 655 aa12.12□□□□□ -0.47
CAST-213ENST00000504465 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
CAST-213ENST00000504465 KTN1Q86UP2 1357 aaKnown RBP12.12□□□□□ -0.47
CAST-213ENST00000504465 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
CAST-213ENST00000504465 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
CAST-213ENST00000504465 PRAG1Q86YV5 1406 aa12.1□□□□□ -0.47
CAST-213ENST00000504465 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CAST-213ENST00000504465 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
CAST-213ENST00000504465 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
CAST-213ENST00000504465 E9PCH4 1651 aa12.09□□□□□ -0.47
CAST-213ENST00000504465 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
CAST-213ENST00000504465 NBPF1Q3BBV0 1214 aa12.09□□□□□ -0.47
CAST-213ENST00000504465 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
CAST-213ENST00000504465 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.48
CAST-213ENST00000504465 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
CAST-213ENST00000504465 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
CAST-213ENST00000504465 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
CAST-213ENST00000504465 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
CAST-213ENST00000504465 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
CAST-213ENST00000504465 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
CAST-213ENST00000504465 TESK2Q96S53 571 aa12.05□□□□□ -0.48
CAST-213ENST00000504465 TRPM1Q7Z4N2 1603 aa12.05□□□□□ -0.48
CAST-213ENST00000504465 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
CAST-213ENST00000504465 A2MP01023 1474 aa12.05□□□□□ -0.48
CAST-213ENST00000504465 RGL3Q3MIN7 710 aa12.04□□□□□ -0.48
CAST-213ENST00000504465 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
CAST-213ENST00000504465 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
CAST-213ENST00000504465 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
CAST-213ENST00000504465 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
CAST-213ENST00000504465 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
CAST-213ENST00000504465 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
CAST-213ENST00000504465 UNC13BO14795 1591 aa12.02□□□□□ -0.49
CAST-213ENST00000504465 PDE3BQ13370 1112 aa12.02□□□□□ -0.49
CAST-213ENST00000504465 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
CAST-213ENST00000504465 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
CAST-213ENST00000504465 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
CAST-213ENST00000504465 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
CAST-213ENST00000504465 IPO9Q96P70 1041 aaKnown RBP12.01□□□□□ -0.49
CAST-213ENST00000504465 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
CAST-213ENST00000504465 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
CAST-213ENST00000504465 PLEKHH2Q8IVE3 1493 aa12□□□□□ -0.49
CAST-213ENST00000504465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.499e-7■■■□□ 17.1
CAST-213ENST00000504465 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
CAST-213ENST00000504465 INSRP06213 1382 aa12□□□□□ -0.49
CAST-213ENST00000504465 PANK3Q9H999 370 aa11.99□□□□□ -0.49
CAST-213ENST00000504465 LAMC1P11047 1609 aa11.99□□□□□ -0.49
CAST-213ENST00000504465 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
CAST-213ENST00000504465 ERBINQ96RT1 1412 aa11.99□□□□□ -0.49
CAST-213ENST00000504465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAST-213ENST00000504465 ATP10AO60312 1499 aa11.98□□□□□ -0.49
CAST-213ENST00000504465 CC2D1BQ5T0F9 858 aaKnown RBP11.98□□□□□ -0.49
CAST-213ENST00000504465 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
CAST-213ENST00000504465 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
CAST-213ENST00000504465 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
CAST-213ENST00000504465 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
CAST-213ENST00000504465 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
CAST-213ENST00000504465 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.49
CAST-213ENST00000504465 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
CAST-213ENST00000504465 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
CAST-213ENST00000504465 PLXNC1O60486 1568 aa11.96□□□□□ -0.5
CAST-213ENST00000504465 TMF1P82094 1093 aa11.94□□□□□ -0.5
CAST-213ENST00000504465 NBR1Q14596 966 aa11.94□□□□□ -0.5
CAST-213ENST00000504465 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
CAST-213ENST00000504465 PLIN1O60240 522 aa11.94□□□□□ -0.5
CAST-213ENST00000504465 PDE4AP27815 886 aa11.93□□□□□ -0.5
CAST-213ENST00000504465 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
CAST-213ENST00000504465 EIF2AK4Q9P2K8 1649 aaKnown RBP11.92□□□□□ -0.5
CAST-213ENST00000504465 BACH2Q9BYV9 841 aa11.92□□□□□ -0.5
CAST-213ENST00000504465 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
CAST-213ENST00000504465 MS4A1P11836 297 aa11.92□□□□□ -0.5
CAST-213ENST00000504465 CRBNQ96SW2 442 aa11.91□□□□□ -0.5
CAST-213ENST00000504465 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
CAST-213ENST00000504465 PLCH2O75038 1416 aa11.9□□□□□ -0.5
CAST-213ENST00000504465 ABCC2Q92887 1545 aa11.9□□□□□ -0.5
CAST-213ENST00000504465 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
CAST-213ENST00000504465 SHROOM2Q13796 1616 aa11.9□□□□□ -0.5
CAST-213ENST00000504465 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
CAST-213ENST00000504465 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.51
CAST-213ENST00000504465 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
CAST-213ENST00000504465 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
CAST-213ENST00000504465 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
CAST-213ENST00000504465 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
CAST-213ENST00000504465 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
CAST-213ENST00000504465 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
CAST-213ENST00000504465 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
CAST-213ENST00000504465 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
CAST-213ENST00000504465 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
CAST-213ENST00000504465 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
CAST-213ENST00000504465 MADDQ8WXG6 1647 aa11.86□□□□□ -0.51
CAST-213ENST00000504465 KNSTRNQ9Y448 316 aa11.86□□□□□ -0.51
CAST-213ENST00000504465 PTPRTO14522 1441 aa11.85□□□□□ -0.51
CAST-213ENST00000504465 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
CAST-213ENST00000504465 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
CAST-213ENST00000504465 ABCC1P33527 1531 aa11.85□□□□□ -0.51
CAST-213ENST00000504465 CHD1O14646 1710 aa11.84□□□□□ -0.51
CAST-213ENST00000504465 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
CAST-213ENST00000504465 SCAF11Q99590 1463 aaKnown RBP11.84□□□□□ -0.51
CAST-213ENST00000504465 TRPM2O94759 1503 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms