RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
RACK1-210ENST00000504325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
RACK1-210ENST00000504325 CNTLNQ9NXG0 1405 aa14.06□□□□□ -0.16
RACK1-210ENST00000504325 KANK1Q14678 1352 aa14.04□□□□□ -0.16
RACK1-210ENST00000504325 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
RACK1-210ENST00000504325 MADDQ8WXG6 1647 aa14.03□□□□□ -0.16
RACK1-210ENST00000504325 FAM135AQ9P2D6 1515 aa14.02□□□□□ -0.16
RACK1-210ENST00000504325 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
RACK1-210ENST00000504325 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
RACK1-210ENST00000504325 PTPRMP28827 1452 aa14.01□□□□□ -0.17
RACK1-210ENST00000504325 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
RACK1-210ENST00000504325 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
RACK1-210ENST00000504325 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
RACK1-210ENST00000504325 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
RACK1-210ENST00000504325 NUP155O75694 1391 aa14□□□□□ -0.17
RACK1-210ENST00000504325 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
RACK1-210ENST00000504325 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
RACK1-210ENST00000504325 DEPDC5O75140 1603 aa14□□□□□ -0.17
RACK1-210ENST00000504325 FER1L4A9Z1Z3 1794 aa13.99□□□□□ -0.17
RACK1-210ENST00000504325 RIMS1Q86UR5 1692 aaKnown RBP13.98□□□□□ -0.17
RACK1-210ENST00000504325 HRCP23327 699 aa13.98□□□□□ -0.17
RACK1-210ENST00000504325 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
RACK1-210ENST00000504325 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
RACK1-210ENST00000504325 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
RACK1-210ENST00000504325 ABCC3O15438 1527 aa13.98□□□□□ -0.17
RACK1-210ENST00000504325 UNC13BO14795 1591 aa13.96□□□□□ -0.17
RACK1-210ENST00000504325 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.17
RACK1-210ENST00000504325 CLTCQ00610 1675 aaKnown RBP13.96□□□□□ -0.17
RACK1-210ENST00000504325 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.18
RACK1-210ENST00000504325 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
RACK1-210ENST00000504325 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
RACK1-210ENST00000504325 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
RACK1-210ENST00000504325 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
RACK1-210ENST00000504325 PZPP20742 1482 aa13.93□□□□□ -0.18
RACK1-210ENST00000504325 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
RACK1-210ENST00000504325 NPATQ14207 1427 aa13.92□□□□□ -0.18
RACK1-210ENST00000504325 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
RACK1-210ENST00000504325 C3P01024 1663 aa13.91□□□□□ -0.18
RACK1-210ENST00000504325 IQGAP3Q86VI3 1631 aa13.91□□□□□ -0.18
RACK1-210ENST00000504325 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
RACK1-210ENST00000504325 CEP152O94986 1710 aa13.9□□□□□ -0.18
RACK1-210ENST00000504325 RPRD2Q5VT52 1461 aaKnown RBP13.89□□□□□ -0.19
RACK1-210ENST00000504325 MPHOSPH9Q99550 1183 aa13.89□□□□□ -0.19
RACK1-210ENST00000504325 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
RACK1-210ENST00000504325 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
RACK1-210ENST00000504325 TET3O43151 1660 aa13.88□□□□□ -0.19
RACK1-210ENST00000504325 TNRQ92752 1358 aa13.88□□□□□ -0.19
RACK1-210ENST00000504325 PKD2Q13563 968 aa13.88□□□□□ -0.19
RACK1-210ENST00000504325 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
RACK1-210ENST00000504325 SETD1BQ9UPS6 1966 aaKnown RBP13.86□□□□□ -0.19
RACK1-210ENST00000504325 SPATA31D1Q6ZQQ2 1576 aa13.85□□□□□ -0.19
RACK1-210ENST00000504325 NOS1P29475 1434 aa13.85□□□□□ -0.19
RACK1-210ENST00000504325 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
RACK1-210ENST00000504325 SLC52A1Q9NWF4 448 aa13.84□□□□□ -0.19
RACK1-210ENST00000504325 E9PCH4 1651 aa13.82□□□□□ -0.2
RACK1-210ENST00000504325 NLRP1Q9C000 1473 aa13.82□□□□□ -0.2
RACK1-210ENST00000504325 IDI1Q13907 227 aa13.82□□□□□ -0.2
RACK1-210ENST00000504325 PREX1Q8TCU6 1659 aa13.82□□□□□ -0.2
RACK1-210ENST00000504325 PTPRTO14522 1441 aa13.81□□□□□ -0.2
RACK1-210ENST00000504325 FOXD1Q16676 465 aa13.81□□□□□ -0.2
RACK1-210ENST00000504325 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
RACK1-210ENST00000504325 A2ML1A8K2U0 1454 aa13.8□□□□□ -0.2
RACK1-210ENST00000504325 LMTK3Q96Q04 1460 aa13.8□□□□□ -0.2
RACK1-210ENST00000504325 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
RACK1-210ENST00000504325 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
RACK1-210ENST00000504325 SYNMO15061 1565 aa13.78□□□□□ -0.2
RACK1-210ENST00000504325 HSPA2P54652 639 aa13.77□□□□□ -0.21
RACK1-210ENST00000504325 PLA2R1Q13018 1463 aa13.77□□□□□ -0.21
RACK1-210ENST00000504325 MYO3AQ8NEV4 1616 aa13.77□□□□□ -0.21
RACK1-210ENST00000504325 CEP170BQ9Y4F5 1589 aaPredicted RBP13.77□□□□□ -0.21
RACK1-210ENST00000504325 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
RACK1-210ENST00000504325 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
RACK1-210ENST00000504325 TRPM2O94759 1503 aa13.74□□□□□ -0.21
RACK1-210ENST00000504325 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
RACK1-210ENST00000504325 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
RACK1-210ENST00000504325 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
RACK1-210ENST00000504325 ZNF142P52746 1687 aaPredicted RBP13.73□□□□□ -0.21
RACK1-210ENST00000504325 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
RACK1-210ENST00000504325 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
RACK1-210ENST00000504325 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
RACK1-210ENST00000504325 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
RACK1-210ENST00000504325 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
RACK1-210ENST00000504325 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
RACK1-210ENST00000504325 CLTCL1P53675 1640 aa13.69□□□□□ -0.22
RACK1-210ENST00000504325 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
RACK1-210ENST00000504325 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
RACK1-210ENST00000504325 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
RACK1-210ENST00000504325 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
RACK1-210ENST00000504325 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
RACK1-210ENST00000504325 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
RACK1-210ENST00000504325 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
RACK1-210ENST00000504325 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
RACK1-210ENST00000504325 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
RACK1-210ENST00000504325 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
RACK1-210ENST00000504325 SLIT1O75093 1534 aa13.67□□□□□ -0.22
RACK1-210ENST00000504325 RPGRIP1LQ68CZ1 1315 aa13.66□□□□□ -0.22
RACK1-210ENST00000504325 LTKP29376 864 aa13.66□□□□□ -0.22
RACK1-210ENST00000504325 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
RACK1-210ENST00000504325 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
RACK1-210ENST00000504325 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms