RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 NPATQ14207 1427 aa17.76■□□□□ 0.43
UBE2D3-211ENST00000502404 FKBP8Q14318 412 aa17.75■□□□□ 0.43
UBE2D3-211ENST00000502404 GGT6Q6P531 493 aa17.75■□□□□ 0.43
UBE2D3-211ENST00000502404 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
UBE2D3-211ENST00000502404 A2MP01023 1474 aa17.75■□□□□ 0.43
UBE2D3-211ENST00000502404 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
UBE2D3-211ENST00000502404 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
UBE2D3-211ENST00000502404 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
UBE2D3-211ENST00000502404 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
UBE2D3-211ENST00000502404 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
UBE2D3-211ENST00000502404 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-211ENST00000502404 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-211ENST00000502404 RTEL1-TNFRSF6BF6WH68 1400 aa17.69■□□□□ 0.42
UBE2D3-211ENST00000502404 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
UBE2D3-211ENST00000502404 INO80Q9ULG1 1556 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-211ENST00000502404 PKD2Q13563 968 aa17.67■□□□□ 0.42
UBE2D3-211ENST00000502404 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
UBE2D3-211ENST00000502404 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
UBE2D3-211ENST00000502404 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
UBE2D3-211ENST00000502404 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
UBE2D3-211ENST00000502404 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
UBE2D3-211ENST00000502404 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
UBE2D3-211ENST00000502404 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
UBE2D3-211ENST00000502404 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
UBE2D3-211ENST00000502404 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
UBE2D3-211ENST00000502404 KIF3BO15066 747 aa17.63■□□□□ 0.41
UBE2D3-211ENST00000502404 NCKAP5LQ9HCH0 1330 aa17.62■□□□□ 0.41
UBE2D3-211ENST00000502404 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-211ENST00000502404 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
UBE2D3-211ENST00000502404 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
UBE2D3-211ENST00000502404 CCDC141Q6ZP82 1450 aa17.61■□□□□ 0.41
UBE2D3-211ENST00000502404 PLA2R1Q13018 1463 aa17.59■□□□□ 0.41
UBE2D3-211ENST00000502404 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
UBE2D3-211ENST00000502404 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
UBE2D3-211ENST00000502404 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
UBE2D3-211ENST00000502404 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
UBE2D3-211ENST00000502404 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-211ENST00000502404 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
UBE2D3-211ENST00000502404 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
UBE2D3-211ENST00000502404 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
UBE2D3-211ENST00000502404 A2ML1A8K2U0 1454 aa17.54■□□□□ 0.4
UBE2D3-211ENST00000502404 ZNF142P52746 1687 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-211ENST00000502404 TNRQ92752 1358 aa17.53■□□□□ 0.4
UBE2D3-211ENST00000502404 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-211ENST00000502404 TCOF1Q13428 1488 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-211ENST00000502404 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
UBE2D3-211ENST00000502404 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.4
UBE2D3-211ENST00000502404 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-211ENST00000502404 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-211ENST00000502404 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.39
UBE2D3-211ENST00000502404 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
UBE2D3-211ENST00000502404 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
UBE2D3-211ENST00000502404 ARHGEF5Q12774 1597 aa17.51■□□□□ 0.39
UBE2D3-211ENST00000502404 PZPP20742 1482 aa17.5■□□□□ 0.39
UBE2D3-211ENST00000502404 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
UBE2D3-211ENST00000502404 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
UBE2D3-211ENST00000502404 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
UBE2D3-211ENST00000502404 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
UBE2D3-211ENST00000502404 DNMT1P26358 1616 aaKnown RBP17.46■□□□□ 0.39
UBE2D3-211ENST00000502404 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-211ENST00000502404 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
UBE2D3-211ENST00000502404 SPDYE2BA6NHP3 402 aa17.44■□□□□ 0.38
UBE2D3-211ENST00000502404 SPDYE6P0CI01 402 aa17.44■□□□□ 0.38
UBE2D3-211ENST00000502404 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
UBE2D3-211ENST00000502404 TOM1O60784 492 aa17.42■□□□□ 0.38
UBE2D3-211ENST00000502404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBE2D3-211ENST00000502404 MAST1Q9Y2H9 1570 aa17.41■□□□□ 0.38
UBE2D3-211ENST00000502404 PROM2Q8N271 834 aa17.4■□□□□ 0.38
UBE2D3-211ENST00000502404 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
UBE2D3-211ENST00000502404 CPS1P31327 1500 aa17.39■□□□□ 0.37
UBE2D3-211ENST00000502404 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
UBE2D3-211ENST00000502404 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-211ENST00000502404 ABCC3O15438 1527 aa17.37■□□□□ 0.37
UBE2D3-211ENST00000502404 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
UBE2D3-211ENST00000502404 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-211ENST00000502404 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-211ENST00000502404 SOCS7O14512 581 aa17.36■□□□□ 0.37
UBE2D3-211ENST00000502404 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
UBE2D3-211ENST00000502404 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-211ENST00000502404 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
UBE2D3-211ENST00000502404 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
UBE2D3-211ENST00000502404 MED14O60244 1454 aa17.35■□□□□ 0.37
UBE2D3-211ENST00000502404 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
UBE2D3-211ENST00000502404 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
UBE2D3-211ENST00000502404 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-211ENST00000502404 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
UBE2D3-211ENST00000502404 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
UBE2D3-211ENST00000502404 NEURL4Q96JN8 1562 aa17.33■□□□□ 0.37
UBE2D3-211ENST00000502404 KANK1Q14678 1352 aa17.33■□□□□ 0.36
UBE2D3-211ENST00000502404 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
UBE2D3-211ENST00000502404 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
UBE2D3-211ENST00000502404 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
UBE2D3-211ENST00000502404 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
UBE2D3-211ENST00000502404 ABCC5O15440 1437 aa17.3■□□□□ 0.36
UBE2D3-211ENST00000502404 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
UBE2D3-211ENST00000502404 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
UBE2D3-211ENST00000502404 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
UBE2D3-211ENST00000502404 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
UBE2D3-211ENST00000502404 HSPA1LP34931 641 aa17.27■□□□□ 0.36
UBE2D3-211ENST00000502404 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms