RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
RNF4-202ENST00000502316 GGT6Q6P531 493 aa21.46■■□□□ 1.03
RNF4-202ENST00000502316 RIMS1Q86UR5 1692 aaKnown RBP21.46■■□□□ 1.03
RNF4-202ENST00000502316 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
RNF4-202ENST00000502316 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
RNF4-202ENST00000502316 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
RNF4-202ENST00000502316 NAIPQ13075 1403 aa21.45■■□□□ 1.02
RNF4-202ENST00000502316 CNTLNQ9NXG0 1405 aa21.45■■□□□ 1.02
RNF4-202ENST00000502316 PTPRMP28827 1452 aa21.44■■□□□ 1.02
RNF4-202ENST00000502316 KDM5DQ9BY66 1539 aa21.43■■□□□ 1.02
RNF4-202ENST00000502316 MROH2AA6NES4 1674 aa21.42■■□□□ 1.02
RNF4-202ENST00000502316 CLTCQ00610 1675 aaKnown RBP21.4■■□□□ 1.02
RNF4-202ENST00000502316 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
RNF4-202ENST00000502316 VWDEQ8N2E2 1590 aa21.4■■□□□ 1.02
RNF4-202ENST00000502316 UNC13BO14795 1591 aa21.39■■□□□ 1.01
RNF4-202ENST00000502316 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
RNF4-202ENST00000502316 ABCC3O15438 1527 aa21.38■■□□□ 1.01
RNF4-202ENST00000502316 WASHC2CQ9Y4E1 1318 aa21.35■■□□□ 1.01
RNF4-202ENST00000502316 C3P01024 1663 aa21.35■■□□□ 1.01
RNF4-202ENST00000502316 LMTK2Q8IWU2 1503 aa21.34■■□□□ 1.01
RNF4-202ENST00000502316 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
RNF4-202ENST00000502316 KANK1Q14678 1352 aa21.34■■□□□ 1.01
RNF4-202ENST00000502316 CEP152O94986 1710 aa21.32■■□□□ 1
RNF4-202ENST00000502316 CAMSAP1Q5T5Y3 1602 aa21.3■■□□□ 1
RNF4-202ENST00000502316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 19e-7■■□□□ 12.4
RNF4-202ENST00000502316 PZPP20742 1482 aa21.3■■□□□ 1
RNF4-202ENST00000502316 IQGAP3Q86VI3 1631 aa21.29■■□□□ 1
RNF4-202ENST00000502316 ARHGAP31Q2M1Z3 1444 aa21.29■■□□□ 1
RNF4-202ENST00000502316 CEBPAP49715 358 aaPredicted RBP21.28■■□□□ 1
RNF4-202ENST00000502316 NPATQ14207 1427 aa21.28■■□□□ 1
RNF4-202ENST00000502316 SETD5Q9C0A6 1442 aa21.28■■□□□ 1
RNF4-202ENST00000502316 EFCAB6Q5THR3 1501 aa21.26■□□□□ 0.99
RNF4-202ENST00000502316 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
RNF4-202ENST00000502316 NUP155O75694 1391 aa21.25■□□□□ 0.99
RNF4-202ENST00000502316 TET3O43151 1660 aa21.25■□□□□ 0.99
RNF4-202ENST00000502316 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
RNF4-202ENST00000502316 RPRD2Q5VT52 1461 aaKnown RBP21.21■□□□□ 0.99
RNF4-202ENST00000502316 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
RNF4-202ENST00000502316 SPATA31D1Q6ZQQ2 1576 aa21.21■□□□□ 0.99
RNF4-202ENST00000502316 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
RNF4-202ENST00000502316 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
RNF4-202ENST00000502316 RAB3GAP2Q9H2M9 1393 aa21.21■□□□□ 0.99
RNF4-202ENST00000502316 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
RNF4-202ENST00000502316 PREX1Q8TCU6 1659 aa21.19■□□□□ 0.98
RNF4-202ENST00000502316 FBXO31Q5XUX0 539 aaPredicted RBP21.18■□□□□ 0.98
RNF4-202ENST00000502316 HRCP23327 699 aa21.17■□□□□ 0.98
RNF4-202ENST00000502316 E9PCH4 1651 aa21.17■□□□□ 0.98
RNF4-202ENST00000502316 MYO3AQ8NEV4 1616 aa21.15■□□□□ 0.98
RNF4-202ENST00000502316 LMTK3Q96Q04 1460 aa21.15■□□□□ 0.98
RNF4-202ENST00000502316 TNRQ92752 1358 aa21.15■□□□□ 0.98
RNF4-202ENST00000502316 NOS1P29475 1434 aa21.14■□□□□ 0.98
RNF4-202ENST00000502316 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
RNF4-202ENST00000502316 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
RNF4-202ENST00000502316 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
RNF4-202ENST00000502316 NLRP1Q9C000 1473 aa21.11■□□□□ 0.97
RNF4-202ENST00000502316 SYNMO15061 1565 aa21.1■□□□□ 0.97
RNF4-202ENST00000502316 CFAP65Q6ZU64 1925 aaKnown RBP21.1■□□□□ 0.97
RNF4-202ENST00000502316 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
RNF4-202ENST00000502316 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
RNF4-202ENST00000502316 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
RNF4-202ENST00000502316 PTPRTO14522 1441 aa21.07■□□□□ 0.96
RNF4-202ENST00000502316 PKD2Q13563 968 aa21.06■□□□□ 0.96
RNF4-202ENST00000502316 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
RNF4-202ENST00000502316 SPHKAPQ2M3C7 1700 aa21.05■□□□□ 0.96
RNF4-202ENST00000502316 PIK3C2BO00750 1634 aa21.04■□□□□ 0.96
RNF4-202ENST00000502316 SLC52A1Q9NWF4 448 aa21.02■□□□□ 0.96
RNF4-202ENST00000502316 TRPM2O94759 1503 aa21.02■□□□□ 0.96
RNF4-202ENST00000502316 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
RNF4-202ENST00000502316 KDM5AP29375 1690 aaKnown RBP21.01■□□□□ 0.95
RNF4-202ENST00000502316 UGGT1Q9NYU2 1555 aa21.01■□□□□ 0.95
RNF4-202ENST00000502316 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
RNF4-202ENST00000502316 IDI1Q13907 227 aa20.99■□□□□ 0.95
RNF4-202ENST00000502316 HSPA2P54652 639 aa20.97■□□□□ 0.95
RNF4-202ENST00000502316 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
RNF4-202ENST00000502316 FOXD1Q16676 465 aa20.95■□□□□ 0.94
RNF4-202ENST00000502316 CLTCL1P53675 1640 aa20.95■□□□□ 0.94
RNF4-202ENST00000502316 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
RNF4-202ENST00000502316 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
RNF4-202ENST00000502316 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
RNF4-202ENST00000502316 SLIT1O75093 1534 aa20.91■□□□□ 0.94
RNF4-202ENST00000502316 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
RNF4-202ENST00000502316 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
RNF4-202ENST00000502316 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
RNF4-202ENST00000502316 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
RNF4-202ENST00000502316 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
RNF4-202ENST00000502316 STAG3Q9UJ98 1225 aa20.87■□□□□ 0.93
RNF4-202ENST00000502316 MYO5BQ9ULV0 1848 aa20.87■□□□□ 0.93
RNF4-202ENST00000502316 KIF1BO60333 1816 aa20.85■□□□□ 0.93
RNF4-202ENST00000502316 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
RNF4-202ENST00000502316 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
RNF4-202ENST00000502316 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
RNF4-202ENST00000502316 NEURL4Q96JN8 1562 aa20.84■□□□□ 0.93
RNF4-202ENST00000502316 MED14O60244 1454 aa20.82■□□□□ 0.92
RNF4-202ENST00000502316 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
RNF4-202ENST00000502316 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
RNF4-202ENST00000502316 SPATA31E1Q6ZUB1 1445 aa20.81■□□□□ 0.92
RNF4-202ENST00000502316 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
RNF4-202ENST00000502316 NCKAP5LQ9HCH0 1330 aa20.8■□□□□ 0.92
RNF4-202ENST00000502316 RIMS2Q9UQ26 1411 aa20.79■□□□□ 0.92
RNF4-202ENST00000502316 LTKP29376 864 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms