RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	DEPDC5	O75140	1603 aa		32.97	■■■□□ 2.87
RAP1B-213	ENST00000501412	PZP	P20742	1482 aa		32.92	■■■□□ 2.86
RAP1B-213	ENST00000501412	MROH1	Q8NDA8	1641 aa		32.92	■■■□□ 2.86
RAP1B-213	ENST00000501412	RNF17	Q9BXT8	1623 aa	Known RBP	32.92	■■■□□ 2.86
RAP1B-213	ENST00000501412	SIGLEC1	Q9BZZ2	1709 aa		32.91	■■■□□ 2.86
RAP1B-213	ENST00000501412	TRIM52	Q96A61	297 aa		32.91	■■■□□ 2.86
RAP1B-213	ENST00000501412	KIF3B	O15066	747 aa		32.89	■■■□□ 2.86
RAP1B-213	ENST00000501412	AGL	P35573	1532 aa		32.89	■■■□□ 2.86
RAP1B-213	ENST00000501412	PRDM15	P57071	1507 aa	Predicted RBP	32.88	■■■□□ 2.85
RAP1B-213	ENST00000501412	NUP155	O75694	1391 aa		32.88	■■■□□ 2.85
RAP1B-213	ENST00000501412	IQGAP3	Q86VI3	1631 aa		32.87	■■■□□ 2.85
RAP1B-213	ENST00000501412	VWDE	Q8N2E2	1590 aa		32.86	■■■□□ 2.85
RAP1B-213	ENST00000501412	FAM135A	Q9P2D6	1515 aa		32.83	■■■□□ 2.85
RAP1B-213	ENST00000501412	CCER1	Q8TC90	406 aa	Predicted RBP	32.83	■■■□□ 2.85
RAP1B-213	ENST00000501412	MPHOSPH9	Q99550	1183 aa		32.83	■■■□□ 2.85
RAP1B-213	ENST00000501412	KDM4F	A0A1W2PPD8	638 aa		32.81	■■■□□ 2.84
RAP1B-213	ENST00000501412	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
RAP1B-213	ENST00000501412	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.76	■■■□□ 2.84
RAP1B-213	ENST00000501412	CLSPN	Q9HAW4	1339 aa		32.73	■■■□□ 2.83
RAP1B-213	ENST00000501412	LMTK2	Q8IWU2	1503 aa		32.72	■■■□□ 2.83
RAP1B-213	ENST00000501412	KANK1	Q14678	1352 aa		32.71	■■■□□ 2.83
RAP1B-213	ENST00000501412	GGT6	Q6P531	493 aa		32.7	■■■□□ 2.83
RAP1B-213	ENST00000501412	TET3	O43151	1660 aa		32.69	■■■□□ 2.82
RAP1B-213	ENST00000501412	CEP152	O94986	1710 aa		32.67	■■■□□ 2.82
RAP1B-213	ENST00000501412	ABCC3	O15438	1527 aa		32.67	■■■□□ 2.82
RAP1B-213	ENST00000501412	PKD2	Q13563	968 aa		32.67	■■■□□ 2.82
RAP1B-213	ENST00000501412	ZC3H13	Q5T200	1668 aa	Known RBP	32.64	■■■□□ 2.82
RAP1B-213	ENST00000501412	FOXD1	Q16676	465 aa		32.64	■■■□□ 2.82
RAP1B-213	ENST00000501412		E9PCH4	1651 aa		32.62	■■■□□ 2.81
RAP1B-213	ENST00000501412	EFCAB6	Q5THR3	1501 aa		32.62	■■■□□ 2.81
RAP1B-213	ENST00000501412	ANKRD30B	Q9BXX2	1392 aa		32.61	■■■□□ 2.81
RAP1B-213	ENST00000501412	PPP6R1	Q9UPN7	881 aa		32.61	■■■□□ 2.81
RAP1B-213	ENST00000501412	WASHC2C	Q9Y4E1	1318 aa		32.57	■■■□□ 2.8
RAP1B-213	ENST00000501412	CAMSAP1	Q5T5Y3	1602 aa		32.57	■■■□□ 2.8
RAP1B-213	ENST00000501412	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.56	■■■□□ 2.8
RAP1B-213	ENST00000501412	MLEC	Q14165	292 aa		32.53	■■■□□ 2.8
RAP1B-213	ENST00000501412	PLA2R1	Q13018	1463 aa		32.53	■■■□□ 2.8
RAP1B-213	ENST00000501412	NPAT	Q14207	1427 aa		32.51	■■■□□ 2.8
RAP1B-213	ENST00000501412	ARHGAP31	Q2M1Z3	1444 aa		32.51	■■■□□ 2.8
RAP1B-213	ENST00000501412	RPRD2	Q5VT52	1461 aa	Known RBP	32.51	■■■□□ 2.79
RAP1B-213	ENST00000501412	CLTC	Q00610	1675 aa	Known RBP	32.5	■■■□□ 2.79
RAP1B-213	ENST00000501412	SIN3A	Q96ST3	1273 aa		32.49	■■■□□ 2.79
RAP1B-213	ENST00000501412	PTPRT	O14522	1441 aa		32.48	■■■□□ 2.79
RAP1B-213	ENST00000501412	SPHKAP	Q2M3C7	1700 aa		32.45	■■■□□ 2.79
RAP1B-213	ENST00000501412	TRPM2	O94759	1503 aa		32.43	■■■□□ 2.78
RAP1B-213	ENST00000501412	CNTLN	Q9NXG0	1405 aa		32.41	■■■□□ 2.78
RAP1B-213	ENST00000501412	MROH2A	A6NES4	1674 aa		32.39	■■■□□ 2.78
RAP1B-213	ENST00000501412	NOS1	P29475	1434 aa		32.38	■■■□□ 2.77
RAP1B-213	ENST00000501412	FER1L4	A9Z1Z3	1794 aa		32.38	■■■□□ 2.77
RAP1B-213	ENST00000501412	ZEB1	P37275	1124 aa	Predicted RBP	32.37	■■■□□ 2.77
RAP1B-213	ENST00000501412	ADAMTSL3	P82987	1691 aa		32.37	■■■□□ 2.77
RAP1B-213	ENST00000501412	NEUROD1	Q13562	356 aa		32.35	■■■□□ 2.77
RAP1B-213	ENST00000501412	ZMYM3	Q14202	1370 aa		32.35	■■■□□ 2.77
RAP1B-213	ENST00000501412	PREX1	Q8TCU6	1659 aa		32.35	■■■□□ 2.77
RAP1B-213	ENST00000501412	CFAP65	Q6ZU64	1925 aa	Known RBP	32.34	■■■□□ 2.77
RAP1B-213	ENST00000501412	CCDC144A	A2RUR9	1427 aa		32.33	■■■□□ 2.77
RAP1B-213	ENST00000501412	ESF1	Q9H501	851 aa	Known RBP	32.32	■■■□□ 2.76
RAP1B-213	ENST00000501412	CLTCL1	P53675	1640 aa		32.32	■■■□□ 2.76
RAP1B-213	ENST00000501412	SYNM	O15061	1565 aa		32.31	■■■□□ 2.76
RAP1B-213	ENST00000501412	MADD	Q8WXG6	1647 aa		32.31	■■■□□ 2.76
RAP1B-213	ENST00000501412	ERVK-7	P63135	1459 aa		32.31	■■■□□ 2.76
RAP1B-213	ENST00000501412	SPATA31D1	Q6ZQQ2	1576 aa		32.29	■■■□□ 2.76
RAP1B-213	ENST00000501412	UGGT1	Q9NYU2	1555 aa		32.28	■■■□□ 2.76
RAP1B-213	ENST00000501412	PIK3C2B	O00750	1634 aa		32.26	■■■□□ 2.76
RAP1B-213	ENST00000501412	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.26	■■■□□ 2.75
RAP1B-213	ENST00000501412	TIMELESS	Q9UNS1	1208 aa		32.26	■■■□□ 2.75
RAP1B-213	ENST00000501412	C3	P01024	1663 aa		32.25	■■■□□ 2.75
RAP1B-213	ENST00000501412	RIMS1	Q86UR5	1692 aa	Known RBP	32.22	■■■□□ 2.75
RAP1B-213	ENST00000501412	TONSL	Q96HA7	1378 aa		32.21	■■■□□ 2.75
RAP1B-213	ENST00000501412	SPATA31E1	Q6ZUB1	1445 aa		32.21	■■■□□ 2.75
RAP1B-213	ENST00000501412	NEURL4	Q96JN8	1562 aa		32.19	■■■□□ 2.74
RAP1B-213	ENST00000501412	PTPRM	P28827	1452 aa		32.17	■■■□□ 2.74
RAP1B-213	ENST00000501412	KIF1B	O60333	1816 aa		32.14	■■■□□ 2.74
RAP1B-213	ENST00000501412	CEBPA	P49715	358 aa	Predicted RBP	32.14	■■■□□ 2.74
RAP1B-213	ENST00000501412	L3MBTL2	Q969R5	705 aa		32.14	■■■□□ 2.74
RAP1B-213	ENST00000501412	SLC52A1	Q9NWF4	448 aa		32.14	■■■□□ 2.74
RAP1B-213	ENST00000501412	ADGRB3	O60242	1522 aa		32.12	■■■□□ 2.73
RAP1B-213	ENST00000501412	IDI1	Q13907	227 aa		32.12	■■■□□ 2.73
RAP1B-213	ENST00000501412	TNR	Q92752	1358 aa		32.09	■■■□□ 2.73
RAP1B-213	ENST00000501412	PPP1R15A	O75807	674 aa	Predicted RBP	32.07	■■■□□ 2.72
RAP1B-213	ENST00000501412	TMEM131L	A2VDJ0	1609 aa		32.05	■■■□□ 2.72
RAP1B-213	ENST00000501412	RGL3	Q3MIN7	710 aa		32.03	■■■□□ 2.72
RAP1B-213	ENST00000501412	NLRP1	Q9C000	1473 aa		32	■■■□□ 2.71
RAP1B-213	ENST00000501412	MYO5B	Q9ULV0	1848 aa		31.99	■■■□□ 2.71
RAP1B-213	ENST00000501412	IFT172	Q9UG01	1749 aa		31.98	■■■□□ 2.71
RAP1B-213	ENST00000501412	KDM5A	P29375	1690 aa	Known RBP	31.97	■■■□□ 2.71
RAP1B-213	ENST00000501412	MYO3A	Q8NEV4	1616 aa		31.95	■■■□□ 2.71
RAP1B-213	ENST00000501412	A2ML1	A8K2U0	1454 aa		31.95	■■■□□ 2.71
RAP1B-213	ENST00000501412	UHRF1BP1	Q6BDS2	1440 aa		31.95	■■■□□ 2.71
RAP1B-213	ENST00000501412	DCAF11	Q8TEB1	546 aa		31.95	■■■□□ 2.7
RAP1B-213	ENST00000501412	CHGA	P10645	457 aa	Known RBP	31.94	■■■□□ 2.7
RAP1B-213	ENST00000501412	PLPPR3	Q6T4P5	718 aa		31.94	■■■□□ 2.7
RAP1B-213	ENST00000501412	PPL	O60437	1756 aa		31.93	■■■□□ 2.7
RAP1B-213	ENST00000501412	UBR1	Q8IWV7	1749 aa		31.92	■■■□□ 2.7
RAP1B-213	ENST00000501412	NEXMIF	Q5QGS0	1516 aa		31.91	■■■□□ 2.7
RAP1B-213	ENST00000501412	NBPF8	Q3BBV2	869 aa		31.91	■■■□□ 2.7
RAP1B-213	ENST00000501412	RPGRIP1L	Q68CZ1	1315 aa		31.9	■■■□□ 2.7
RAP1B-213	ENST00000501412	MYOM2	P54296	1465 aa		31.9	■■■□□ 2.7
RAP1B-213	ENST00000501412	SETD1B	Q9UPS6	1966 aa	Known RBP	31.9	■■■□□ 2.7
RAP1B-213	ENST00000501412	STAC3	Q96MF2	364 aa		31.89	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 100 ms