RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 NEO1Q92859 1461 aa25.99■■□□□ 1.75
LINC00535-201ENST00000501400 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
LINC00535-201ENST00000501400 HIRIP3Q9BW71 556 aaPredicted RBP25.98■■□□□ 1.75
LINC00535-201ENST00000501400 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
LINC00535-201ENST00000501400 VWDEQ8N2E2 1590 aa25.95■■□□□ 1.74
LINC00535-201ENST00000501400 HECW2Q9P2P5 1572 aa25.95■■□□□ 1.74
LINC00535-201ENST00000501400 DIP2BQ9P265 1576 aa25.95■■□□□ 1.74
LINC00535-201ENST00000501400 E9PCH4 1651 aa25.93■■□□□ 1.74
LINC00535-201ENST00000501400 PRDM15P57071 1507 aaPredicted RBP25.93■■□□□ 1.74
LINC00535-201ENST00000501400 ATP10AO60312 1499 aa25.93■■□□□ 1.74
LINC00535-201ENST00000501400 MLH3Q9UHC1 1453 aa25.92■■□□□ 1.74
LINC00535-201ENST00000501400 DHX29Q7Z478 1369 aaKnown RBP25.92■■□□□ 1.74
LINC00535-201ENST00000501400 TET3O43151 1660 aa25.9■■□□□ 1.74
LINC00535-201ENST00000501400 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
LINC00535-201ENST00000501400 RICTORQ6R327 1708 aa25.89■■□□□ 1.74
LINC00535-201ENST00000501400 CCDC144AA2RUR9 1427 aa25.89■■□□□ 1.74
LINC00535-201ENST00000501400 ABCA6Q8N139 1617 aa25.89■■□□□ 1.74
LINC00535-201ENST00000501400 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.73
LINC00535-201ENST00000501400 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
LINC00535-201ENST00000501400 A2MP01023 1474 aa25.86■■□□□ 1.73
LINC00535-201ENST00000501400 HSPA5P11021 654 aaKnown RBP25.86■■□□□ 1.73
LINC00535-201ENST00000501400 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
LINC00535-201ENST00000501400 SPHKAPQ2M3C7 1700 aa25.83■■□□□ 1.73
LINC00535-201ENST00000501400 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.73
LINC00535-201ENST00000501400 BCORL1Q5H9F3 1711 aa25.83■■□□□ 1.73
LINC00535-201ENST00000501400 KIF3BO15066 747 aa25.82■■□□□ 1.72
LINC00535-201ENST00000501400 SPATA31E1Q6ZUB1 1445 aa25.81■■□□□ 1.72
LINC00535-201ENST00000501400 EIF4G2P78344 907 aaKnown RBP eCLIP25.81■■□□□ 1.72
LINC00535-201ENST00000501400 TRPM2O94759 1503 aa25.81■■□□□ 1.72
LINC00535-201ENST00000501400 RALGAPBQ86X10 1494 aa25.81■■□□□ 1.72
LINC00535-201ENST00000501400 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
LINC00535-201ENST00000501400 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
LINC00535-201ENST00000501400 RAPGEF3O95398 923 aa25.78■■□□□ 1.72
LINC00535-201ENST00000501400 KANK1Q14678 1352 aa25.78■■□□□ 1.72
LINC00535-201ENST00000501400 PTPRTO14522 1441 aa25.77■■□□□ 1.72
LINC00535-201ENST00000501400 EFCAB6Q5THR3 1501 aa25.77■■□□□ 1.72
LINC00535-201ENST00000501400 CEP152O94986 1710 aa25.77■■□□□ 1.72
LINC00535-201ENST00000501400 LMTK2Q8IWU2 1503 aa25.76■■□□□ 1.71
LINC00535-201ENST00000501400 TSPOAP1O95153 1857 aa25.75■■□□□ 1.71
LINC00535-201ENST00000501400 FAM69CQ0P6D2 419 aa25.75■■□□□ 1.71
LINC00535-201ENST00000501400 POLR1AO95602 1720 aaPredicted RBP25.75■■□□□ 1.71
LINC00535-201ENST00000501400 CLTCL1P53675 1640 aa25.75■■□□□ 1.71
LINC00535-201ENST00000501400 ZNF326Q5BKZ1 582 aaKnown RBP25.74■■□□□ 1.71
LINC00535-201ENST00000501400 TRPM1Q7Z4N2 1603 aa25.72■■□□□ 1.71
LINC00535-201ENST00000501400 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
LINC00535-201ENST00000501400 WASHC2AQ641Q2 1341 aa25.72■■□□□ 1.71
LINC00535-201ENST00000501400 PRAG1Q86YV5 1406 aa25.71■■□□□ 1.71
LINC00535-201ENST00000501400 DCAF11Q8TEB1 546 aa25.71■■□□□ 1.71
LINC00535-201ENST00000501400 ZMYM4Q5VZL5 1548 aa25.71■■□□□ 1.71
LINC00535-201ENST00000501400 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
LINC00535-201ENST00000501400 USP47Q96K76 1375 aa25.68■■□□□ 1.7
LINC00535-201ENST00000501400 YEATS2Q9ULM3 1422 aa25.68■■□□□ 1.7
LINC00535-201ENST00000501400 RGL3Q3MIN7 710 aa25.65■■□□□ 1.7
LINC00535-201ENST00000501400 C11orf95C9JLR9 678 aaPredicted RBP25.65■■□□□ 1.7
LINC00535-201ENST00000501400 CCDC7Q96M83 1385 aa25.64■■□□□ 1.69
LINC00535-201ENST00000501400 ABCC3O15438 1527 aa25.63■■□□□ 1.69
LINC00535-201ENST00000501400 UGGT1Q9NYU2 1555 aa25.62■■□□□ 1.69
LINC00535-201ENST00000501400 NEURL4Q96JN8 1562 aa25.62■■□□□ 1.69
LINC00535-201ENST00000501400 LAMC1P11047 1609 aa25.6■■□□□ 1.69
LINC00535-201ENST00000501400 CAMSAP1Q5T5Y3 1602 aa25.59■■□□□ 1.69
LINC00535-201ENST00000501400 MADDQ8WXG6 1647 aa25.59■■□□□ 1.69
LINC00535-201ENST00000501400 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
LINC00535-201ENST00000501400 NPATQ14207 1427 aa25.58■■□□□ 1.69
LINC00535-201ENST00000501400 CARD11Q9BXL7 1154 aa25.57■■□□□ 1.68
LINC00535-201ENST00000501400 ROCK2O75116 1388 aaKnown RBP25.57■■□□□ 1.68
LINC00535-201ENST00000501400 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
LINC00535-201ENST00000501400 ZC3H13Q5T200 1668 aaKnown RBP25.56■■□□□ 1.68
LINC00535-201ENST00000501400 CNTLNQ9NXG0 1405 aa25.55■■□□□ 1.68
LINC00535-201ENST00000501400 GGT6Q6P531 493 aa25.55■■□□□ 1.68
LINC00535-201ENST00000501400 MROH2AA6NES4 1674 aa25.55■■□□□ 1.68
LINC00535-201ENST00000501400 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
LINC00535-201ENST00000501400 KIF1BO60333 1816 aa25.55■■□□□ 1.68
LINC00535-201ENST00000501400 SIGLEC1Q9BZZ2 1709 aa25.54■■□□□ 1.68
LINC00535-201ENST00000501400 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
LINC00535-201ENST00000501400 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
LINC00535-201ENST00000501400 CENPBP07199 599 aaPredicted RBP25.51■■□□□ 1.67
LINC00535-201ENST00000501400 CFAP65Q6ZU64 1925 aaKnown RBP25.5■■□□□ 1.67
LINC00535-201ENST00000501400 ADGRB3O60242 1522 aa25.49■■□□□ 1.67
LINC00535-201ENST00000501400 COL17A1Q9UMD9 1497 aaPredicted RBP25.49■■□□□ 1.67
LINC00535-201ENST00000501400 NBPF1Q3BBV0 1214 aa25.49■■□□□ 1.67
LINC00535-201ENST00000501400 ANP32CO43423 234 aa25.47■■□□□ 1.67
LINC00535-201ENST00000501400 WASHC2CQ9Y4E1 1318 aa25.47■■□□□ 1.67
LINC00535-201ENST00000501400 NOS1P29475 1434 aa25.45■■□□□ 1.67
LINC00535-201ENST00000501400 SYNMO15061 1565 aa25.45■■□□□ 1.66
LINC00535-201ENST00000501400 PIK3C2BO00750 1634 aa25.44■■□□□ 1.66
LINC00535-201ENST00000501400 ARHGAP31Q2M1Z3 1444 aa25.44■■□□□ 1.66
LINC00535-201ENST00000501400 ARHGEF40Q8TER5 1519 aa25.44■■□□□ 1.66
LINC00535-201ENST00000501400 MYOM2P54296 1465 aa25.44■■□□□ 1.66
LINC00535-201ENST00000501400 ST20-MTHFSA0A0A6YYL1 179 aa25.43■■□□□ 1.66
LINC00535-201ENST00000501400 AGLP35573 1532 aa25.43■■□□□ 1.66
LINC00535-201ENST00000501400 IQGAP1P46940 1657 aa25.43■■□□□ 1.66
LINC00535-201ENST00000501400 KIAA1210Q9ULL0 1709 aa25.42■■□□□ 1.66
LINC00535-201ENST00000501400 ARID4BQ4LE39 1312 aaPredicted RBP25.4■■□□□ 1.66
LINC00535-201ENST00000501400 CCER2I3L3R5 266 aa25.4■■□□□ 1.66
LINC00535-201ENST00000501400 STAC3Q96MF2 364 aa25.4■■□□□ 1.66
LINC00535-201ENST00000501400 PPLO60437 1756 aa25.37■■□□□ 1.65
LINC00535-201ENST00000501400 PREX1Q8TCU6 1659 aa25.37■■□□□ 1.65
LINC00535-201ENST00000501400 NRXN1Q9ULB1 1477 aa25.37■■□□□ 1.65
LINC00535-201ENST00000501400 ADGRF5Q8IZF2 1346 aa25.3■■□□□ 1.64
LINC00535-201ENST00000501400 TESK2Q96S53 571 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms