RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 FAM135AQ9P2D6 1515 aa21.83■■□□□ 1.09
USP11-212ENST00000497179 FER1L4A9Z1Z3 1794 aa21.83■■□□□ 1.09
USP11-212ENST00000497179 PRDM15P57071 1507 aaPredicted RBP21.82■■□□□ 1.08
USP11-212ENST00000497179 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
USP11-212ENST00000497179 GGT6Q6P531 493 aa21.79■■□□□ 1.08
USP11-212ENST00000497179 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
USP11-212ENST00000497179 UNC13BO14795 1591 aa21.78■■□□□ 1.08
USP11-212ENST00000497179 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
USP11-212ENST00000497179 KDM5DQ9BY66 1539 aa21.77■■□□□ 1.08
USP11-212ENST00000497179 CNTLNQ9NXG0 1405 aa21.77■■□□□ 1.08
USP11-212ENST00000497179 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
USP11-212ENST00000497179 MROH2AA6NES4 1674 aa21.75■■□□□ 1.07
USP11-212ENST00000497179 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
USP11-212ENST00000497179 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
USP11-212ENST00000497179 ABCC3O15438 1527 aa21.75■■□□□ 1.07
USP11-212ENST00000497179 PTPRMP28827 1452 aa21.72■■□□□ 1.07
USP11-212ENST00000497179 TRIM26Q12899 539 aaPredicted RBP21.71■■□□□ 1.07
USP11-212ENST00000497179 ESF1Q9H501 851 aaKnown RBP21.71■■□□□ 1.07
USP11-212ENST00000497179 KANK1Q14678 1352 aa21.71■■□□□ 1.07
USP11-212ENST00000497179 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.07
USP11-212ENST00000497179 CEP152O94986 1710 aa21.7■■□□□ 1.06
USP11-212ENST00000497179 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
USP11-212ENST00000497179 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
USP11-212ENST00000497179 IQGAP3Q86VI3 1631 aa21.68■■□□□ 1.06
USP11-212ENST00000497179 C3P01024 1663 aa21.68■■□□□ 1.06
USP11-212ENST00000497179 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
USP11-212ENST00000497179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.67■■□□□ 1.06
USP11-212ENST00000497179 ZMYM3Q14202 1370 aa21.64■■□□□ 1.06
USP11-212ENST00000497179 EFCAB6Q5THR3 1501 aa21.64■■□□□ 1.05
USP11-212ENST00000497179 TET3O43151 1660 aa21.63■■□□□ 1.05
USP11-212ENST00000497179 PZPP20742 1482 aa21.63■■□□□ 1.05
USP11-212ENST00000497179 NUP155O75694 1391 aa21.62■■□□□ 1.05
USP11-212ENST00000497179 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
USP11-212ENST00000497179 ARHGAP31Q2M1Z3 1444 aa21.62■■□□□ 1.05
USP11-212ENST00000497179 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
USP11-212ENST00000497179 NPATQ14207 1427 aa21.58■■□□□ 1.05
USP11-212ENST00000497179 CEBPAP49715 358 aaPredicted RBP21.58■■□□□ 1.05
USP11-212ENST00000497179 HRCP23327 699 aa21.55■■□□□ 1.04
USP11-212ENST00000497179 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
USP11-212ENST00000497179 SPATA31D1Q6ZQQ2 1576 aa21.55■■□□□ 1.04
USP11-212ENST00000497179 E9PCH4 1651 aa21.54■■□□□ 1.04
USP11-212ENST00000497179 PREX1Q8TCU6 1659 aa21.54■■□□□ 1.04
USP11-212ENST00000497179 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
USP11-212ENST00000497179 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
USP11-212ENST00000497179 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
USP11-212ENST00000497179 MYO3AQ8NEV4 1616 aa21.49■■□□□ 1.03
USP11-212ENST00000497179 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
USP11-212ENST00000497179 TNRQ92752 1358 aa21.48■■□□□ 1.03
USP11-212ENST00000497179 NOS1P29475 1434 aa21.48■■□□□ 1.03
USP11-212ENST00000497179 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
USP11-212ENST00000497179 SYNMO15061 1565 aa21.47■■□□□ 1.03
USP11-212ENST00000497179 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
USP11-212ENST00000497179 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
USP11-212ENST00000497179 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
USP11-212ENST00000497179 SETD1BQ9UPS6 1966 aaKnown RBP21.44■■□□□ 1.02
USP11-212ENST00000497179 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
USP11-212ENST00000497179 NLRP1Q9C000 1473 aa21.44■■□□□ 1.02
USP11-212ENST00000497179 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
USP11-212ENST00000497179 PKD2Q13563 968 aa21.43■■□□□ 1.02
USP11-212ENST00000497179 PTPRTO14522 1441 aa21.42■■□□□ 1.02
USP11-212ENST00000497179 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
USP11-212ENST00000497179 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
USP11-212ENST00000497179 CFAP65Q6ZU64 1925 aaKnown RBP21.41■■□□□ 1.02
USP11-212ENST00000497179 CEP170BQ9Y4F5 1589 aaPredicted RBP21.41■■□□□ 1.02
USP11-212ENST00000497179 TRPM2O94759 1503 aa21.4■■□□□ 1.02
USP11-212ENST00000497179 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
USP11-212ENST00000497179 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
USP11-212ENST00000497179 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
USP11-212ENST00000497179 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
USP11-212ENST00000497179 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
USP11-212ENST00000497179 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
USP11-212ENST00000497179 FOXD1Q16676 465 aa21.33■■□□□ 1.01
USP11-212ENST00000497179 ADGRB3O60242 1522 aa21.33■■□□□ 1
USP11-212ENST00000497179 CLTCL1P53675 1640 aa21.33■■□□□ 1
USP11-212ENST00000497179 UBR1Q8IWV7 1749 aa21.32■■□□□ 1
USP11-212ENST00000497179 IDI1Q13907 227 aa21.31■■□□□ 1
USP11-212ENST00000497179 TMEM131LA2VDJ0 1609 aa21.28■■□□□ 1
USP11-212ENST00000497179 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
USP11-212ENST00000497179 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
USP11-212ENST00000497179 CCDC144AA2RUR9 1427 aa21.25■□□□□ 0.99
USP11-212ENST00000497179 HSPA2P54652 639 aa21.24■□□□□ 0.99
USP11-212ENST00000497179 THEMISQ8N1K5 641 aaPredicted RBP21.24■□□□□ 0.99
USP11-212ENST00000497179 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
USP11-212ENST00000497179 SLIT1O75093 1534 aa21.23■□□□□ 0.99
USP11-212ENST00000497179 KIF1BO60333 1816 aa21.22■□□□□ 0.99
USP11-212ENST00000497179 MYO5BQ9ULV0 1848 aa21.22■□□□□ 0.99
USP11-212ENST00000497179 STAG3Q9UJ98 1225 aa21.21■□□□□ 0.99
USP11-212ENST00000497179 NEURL4Q96JN8 1562 aa21.2■□□□□ 0.98
USP11-212ENST00000497179 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
USP11-212ENST00000497179 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
USP11-212ENST00000497179 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
USP11-212ENST00000497179 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
USP11-212ENST00000497179 STRCQ7RTU9 1775 aa21.17■□□□□ 0.98
USP11-212ENST00000497179 ZFYVE9O95405 1425 aa21.16■□□□□ 0.98
USP11-212ENST00000497179 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
USP11-212ENST00000497179 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.98
USP11-212ENST00000497179 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
USP11-212ENST00000497179 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
USP11-212ENST00000497179 MED14O60244 1454 aa21.11■□□□□ 0.97
USP11-212ENST00000497179 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms