RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 C3P01024 1663 aa34.71■■■■□ 3.15
CHRD-217ENST00000496527 CLTCQ00610 1675 aaKnown RBP34.71■■■■□ 3.15
CHRD-217ENST00000496527 MROH2AA6NES4 1674 aa34.7■■■■□ 3.15
CHRD-217ENST00000496527 ERBINQ96RT1 1412 aa34.7■■■■□ 3.15
CHRD-217ENST00000496527 RRBP1Q9P2E9 1410 aaKnown RBP34.69■■■■□ 3.14
CHRD-217ENST00000496527 ITGAEP38570 1179 aa34.68■■■■□ 3.14
CHRD-217ENST00000496527 WASHC2CQ9Y4E1 1318 aa34.68■■■■□ 3.14
CHRD-217ENST00000496527 PTPRKQ15262 1439 aa34.67■■■■□ 3.14
CHRD-217ENST00000496527 RNF17Q9BXT8 1623 aaKnown RBP34.65■■■■□ 3.14
CHRD-217ENST00000496527 FAM135AQ9P2D6 1515 aa34.65■■■■□ 3.14
CHRD-217ENST00000496527 KDM5DQ9BY66 1539 aa34.64■■■■□ 3.14
CHRD-217ENST00000496527 LMTK3Q96Q04 1460 aa34.61■■■■□ 3.13
CHRD-217ENST00000496527 ROCK1Q13464 1354 aa34.59■■■■□ 3.13
CHRD-217ENST00000496527 SETD1BQ9UPS6 1966 aaKnown RBP34.58■■■■□ 3.13
CHRD-217ENST00000496527 NPATQ14207 1427 aa34.58■■■■□ 3.13
CHRD-217ENST00000496527 PREX1Q8TCU6 1659 aa34.55■■■■□ 3.12
CHRD-217ENST00000496527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.55■■■■□ 3.127e-11■□□□□ 10.1
CHRD-217ENST00000496527 MROH1Q8NDA8 1641 aa34.55■■■■□ 3.12
CHRD-217ENST00000496527 UHRF1BP1Q6BDS2 1440 aa34.55■■■■□ 3.12
CHRD-217ENST00000496527 ANKRD50Q9ULJ7 1429 aa34.55■■■■□ 3.12
CHRD-217ENST00000496527 ABCC3O15438 1527 aa34.52■■■■□ 3.12
CHRD-217ENST00000496527 KANK1Q14678 1352 aa34.5■■■■□ 3.11
CHRD-217ENST00000496527 HSPA2P54652 639 aa34.5■■■■□ 3.11
CHRD-217ENST00000496527 ZC3H13Q5T200 1668 aaKnown RBP34.5■■■■□ 3.11
CHRD-217ENST00000496527 PRDM15P57071 1507 aaPredicted RBP34.5■■■■□ 3.11
CHRD-217ENST00000496527 PZPP20742 1482 aa34.48■■■■□ 3.11
CHRD-217ENST00000496527 DEPDC5O75140 1603 aa34.47■■■■□ 3.11
CHRD-217ENST00000496527 FBXO31Q5XUX0 539 aaPredicted RBP34.45■■■■□ 3.11
CHRD-217ENST00000496527 CEP152O94986 1710 aa34.42■■■■□ 3.1
CHRD-217ENST00000496527 TNRQ92752 1358 aa34.38■■■■□ 3.09
CHRD-217ENST00000496527 CAMSAP1Q5T5Y3 1602 aa34.38■■■■□ 3.09
CHRD-217ENST00000496527 VWDEQ8N2E2 1590 aa34.35■■■■□ 3.09
CHRD-217ENST00000496527 MYO3AQ8NEV4 1616 aa34.33■■■■□ 3.09
CHRD-217ENST00000496527 ARHGAP31Q2M1Z3 1444 aa34.32■■■■□ 3.08
CHRD-217ENST00000496527 LMTK2Q8IWU2 1503 aa34.32■■■■□ 3.08
CHRD-217ENST00000496527 UNC13BO14795 1591 aa34.28■■■■□ 3.08
CHRD-217ENST00000496527 ERVK-7P63135 1459 aa34.28■■■■□ 3.08
CHRD-217ENST00000496527 SPATA31D1Q6ZQQ2 1576 aa34.28■■■■□ 3.08
CHRD-217ENST00000496527 CEP170BQ9Y4F5 1589 aaPredicted RBP34.28■■■■□ 3.08
CHRD-217ENST00000496527 A2ML1A8K2U0 1454 aa34.27■■■■□ 3.08
CHRD-217ENST00000496527 NAIPQ13075 1403 aa34.26■■■■□ 3.07
CHRD-217ENST00000496527 ZNF142P52746 1687 aaPredicted RBP34.25■■■■□ 3.07
CHRD-217ENST00000496527 NLRP1Q9C000 1473 aa34.23■■■■□ 3.07
CHRD-217ENST00000496527 CFAP65Q6ZU64 1925 aaKnown RBP34.23■■■■□ 3.07
CHRD-217ENST00000496527 NUP155O75694 1391 aa34.23■■■■□ 3.07
CHRD-217ENST00000496527 HFM1A2PYH4 1435 aa34.21■■■■□ 3.07
CHRD-217ENST00000496527 EFCAB6Q5THR3 1501 aa34.2■■■■□ 3.07
CHRD-217ENST00000496527 GCC2Q8IWJ2 1684 aa34.19■■■■□ 3.06
CHRD-217ENST00000496527 TET3O43151 1660 aa34.16■■■■□ 3.06
CHRD-217ENST00000496527 DMRT2Q9Y5R5 561 aa34.15■■■■□ 3.06
CHRD-217ENST00000496527 IQGAP3Q86VI3 1631 aa34.15■■■■□ 3.06
CHRD-217ENST00000496527 RPRD2Q5VT52 1461 aaKnown RBP34.14■■■■□ 3.06
CHRD-217ENST00000496527 STRCQ7RTU9 1775 aa34.13■■■■□ 3.05
CHRD-217ENST00000496527 THEMISQ8N1K5 641 aaPredicted RBP34.13■■■■□ 3.05
CHRD-217ENST00000496527 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
CHRD-217ENST00000496527 PLA2R1Q13018 1463 aa34.11■■■■□ 3.05
CHRD-217ENST00000496527 NOS1P29475 1434 aa34.09■■■■□ 3.05
CHRD-217ENST00000496527 PKD2Q13563 968 aa34.08■■■■□ 3.05
CHRD-217ENST00000496527 NCKAP5LQ9HCH0 1330 aa34.07■■■■□ 3.05
CHRD-217ENST00000496527 TRIM52Q96A61 297 aa34.06■■■■□ 3.04
CHRD-217ENST00000496527 PTPRTO14522 1441 aa34.03■■■■□ 3.04
CHRD-217ENST00000496527 IDI1Q13907 227 aa34.02■■■■□ 3.04
CHRD-217ENST00000496527 SLC52A1Q9NWF4 448 aa34.02■■■■□ 3.04
CHRD-217ENST00000496527 E9PCH4 1651 aa34.02■■■■□ 3.04
CHRD-217ENST00000496527 SYNMO15061 1565 aa34.02■■■■□ 3.04
CHRD-217ENST00000496527 STAG3Q9UJ98 1225 aa34.01■■■■□ 3.03
CHRD-217ENST00000496527 ANKLE2Q86XL3 938 aa34■■■■□ 3.03
CHRD-217ENST00000496527 UBR1Q8IWV7 1749 aa33.96■■■■□ 3.03
CHRD-217ENST00000496527 PIK3C2BO00750 1634 aa33.96■■■■□ 3.03
CHRD-217ENST00000496527 SETD5Q9C0A6 1442 aa33.94■■■■□ 3.02
CHRD-217ENST00000496527 SLC4A1APQ9BWU0 796 aaKnown RBP33.91■■■■□ 3.02
CHRD-217ENST00000496527 POLR1AO95602 1720 aaPredicted RBP33.88■■■■□ 3.01
CHRD-217ENST00000496527 ACIN1Q9UKV3 1341 aaKnown RBP33.88■■■■□ 3.01
CHRD-217ENST00000496527 KDM5AP29375 1690 aaKnown RBP33.87■■■■□ 3.01
CHRD-217ENST00000496527 ADGRB3O60242 1522 aa33.85■■■■□ 3.01
CHRD-217ENST00000496527 EID1Q9Y6B2 187 aa33.85■■■■□ 3.01
CHRD-217ENST00000496527 TMEM2Q9UHN6 1383 aa33.85■■■■□ 3.01
CHRD-217ENST00000496527 SLIT1O75093 1534 aa33.84■■■■□ 3.01
CHRD-217ENST00000496527 ARHGAP23Q9P227 1491 aa33.84■■■■□ 3.01
CHRD-217ENST00000496527 TXNDC2Q86VQ3 553 aa33.84■■■■□ 3.01
CHRD-217ENST00000496527 NEURL4Q96JN8 1562 aa33.84■■■■□ 3.01
CHRD-217ENST00000496527 NPHP4O75161 1426 aaPredicted RBP33.82■■■■□ 3
CHRD-217ENST00000496527 CHGAP10645 457 aaKnown RBP33.82■■■■□ 3
CHRD-217ENST00000496527 RAB3GAP2Q9H2M9 1393 aa33.81■■■■□ 3
CHRD-217ENST00000496527 MED14O60244 1454 aa33.81■■■■□ 3
CHRD-217ENST00000496527 SCAF11Q99590 1463 aaKnown RBP33.81■■■■□ 3
CHRD-217ENST00000496527 SPHKAPQ2M3C7 1700 aa33.8■■■■□ 3
CHRD-217ENST00000496527 LTKP29376 864 aa33.8■■■■□ 3
CHRD-217ENST00000496527 MPHOSPH9Q99550 1183 aa33.77■■■■□ 3
CHRD-217ENST00000496527 TMEM131LA2VDJ0 1609 aa33.75■■■□□ 2.99
CHRD-217ENST00000496527 IQGAP1P46940 1657 aa33.72■■■□□ 2.99
CHRD-217ENST00000496527 HDGFP51858 240 aaKnown RBP33.72■■■□□ 2.99
CHRD-217ENST00000496527 TRPM2O94759 1503 aa33.72■■■□□ 2.99
CHRD-217ENST00000496527 ZNF335Q9H4Z2 1342 aaPredicted RBP33.72■■■□□ 2.99
CHRD-217ENST00000496527 CERKQ8TCT0 537 aa33.71■■■□□ 2.99
CHRD-217ENST00000496527 FOXD1Q16676 465 aa33.7■■■□□ 2.99
CHRD-217ENST00000496527 MYO5BQ9ULV0 1848 aa33.69■■■□□ 2.98
CHRD-217ENST00000496527 RIMS2Q9UQ26 1411 aa33.68■■■□□ 2.98
CHRD-217ENST00000496527 HRCP23327 699 aa33.67■■■□□ 2.98
CHRD-217ENST00000496527 LTBP4Q8N2S1 1624 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms