RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 ROCK1Q13464 1354 aa25.41■■□□□ 1.66
CNOT3-207ENST00000496327 EIF2AK4Q9P2K8 1649 aaKnown RBP25.38■■□□□ 1.65
CNOT3-207ENST00000496327 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
CNOT3-207ENST00000496327 FAM135AQ9P2D6 1515 aa25.34■■□□□ 1.65
CNOT3-207ENST00000496327 CEBPAP49715 358 aaPredicted RBP25.33■■□□□ 1.65
CNOT3-207ENST00000496327 ANKRD50Q9ULJ7 1429 aa25.33■■□□□ 1.65
CNOT3-207ENST00000496327 RNF17Q9BXT8 1623 aaKnown RBP25.33■■□□□ 1.65
CNOT3-207ENST00000496327 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
CNOT3-207ENST00000496327 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
CNOT3-207ENST00000496327 WASHC2CQ9Y4E1 1318 aa25.31■■□□□ 1.64
CNOT3-207ENST00000496327 MROH2AA6NES4 1674 aa25.27■■□□□ 1.64
CNOT3-207ENST00000496327 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
CNOT3-207ENST00000496327 CLTCQ00610 1675 aaKnown RBP25.26■■□□□ 1.63
CNOT3-207ENST00000496327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.632e-7■■■■□ 20.4
CNOT3-207ENST00000496327 PRDM15P57071 1507 aaPredicted RBP25.25■■□□□ 1.63
CNOT3-207ENST00000496327 ABCC3O15438 1527 aa25.24■■□□□ 1.63
CNOT3-207ENST00000496327 KANK1Q14678 1352 aa25.24■■□□□ 1.63
CNOT3-207ENST00000496327 C3P01024 1663 aa25.23■■□□□ 1.63
CNOT3-207ENST00000496327 NPATQ14207 1427 aa25.22■■□□□ 1.63
CNOT3-207ENST00000496327 DEPDC5O75140 1603 aa25.21■■□□□ 1.63
CNOT3-207ENST00000496327 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
CNOT3-207ENST00000496327 PZPP20742 1482 aa25.18■■□□□ 1.62
CNOT3-207ENST00000496327 NAIPQ13075 1403 aa25.18■■□□□ 1.62
CNOT3-207ENST00000496327 HFM1A2PYH4 1435 aa25.16■■□□□ 1.62
CNOT3-207ENST00000496327 VWDEQ8N2E2 1590 aa25.15■■□□□ 1.62
CNOT3-207ENST00000496327 UHRF1BP1Q6BDS2 1440 aa25.15■■□□□ 1.62
CNOT3-207ENST00000496327 LMTK3Q96Q04 1460 aa25.15■■□□□ 1.62
CNOT3-207ENST00000496327 LMTK2Q8IWU2 1503 aa25.14■■□□□ 1.62
CNOT3-207ENST00000496327 FBXO31Q5XUX0 539 aaPredicted RBP25.13■■□□□ 1.61
CNOT3-207ENST00000496327 UNC13BO14795 1591 aa25.12■■□□□ 1.61
CNOT3-207ENST00000496327 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
CNOT3-207ENST00000496327 TNRQ92752 1358 aa25.1■■□□□ 1.61
CNOT3-207ENST00000496327 CEP152O94986 1710 aa25.1■■□□□ 1.61
CNOT3-207ENST00000496327 CAMSAP1Q5T5Y3 1602 aa25.09■■□□□ 1.61
CNOT3-207ENST00000496327 NUP155O75694 1391 aa25.08■■□□□ 1.61
CNOT3-207ENST00000496327 GCC2Q8IWJ2 1684 aa25.08■■□□□ 1.61
CNOT3-207ENST00000496327 PREX1Q8TCU6 1659 aa25.08■■□□□ 1.61
CNOT3-207ENST00000496327 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
CNOT3-207ENST00000496327 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
CNOT3-207ENST00000496327 EFCAB6Q5THR3 1501 aa25.04■■□□□ 1.6
CNOT3-207ENST00000496327 HSPA2P54652 639 aa25.04■■□□□ 1.6
CNOT3-207ENST00000496327 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
CNOT3-207ENST00000496327 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
CNOT3-207ENST00000496327 IQGAP3Q86VI3 1631 aa25■■□□□ 1.59
CNOT3-207ENST00000496327 RPRD2Q5VT52 1461 aaKnown RBP24.99■■□□□ 1.59
CNOT3-207ENST00000496327 NLRP1Q9C000 1473 aa24.99■■□□□ 1.59
CNOT3-207ENST00000496327 TET3O43151 1660 aa24.98■■□□□ 1.59
CNOT3-207ENST00000496327 A2ML1A8K2U0 1454 aa24.98■■□□□ 1.59
CNOT3-207ENST00000496327 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
CNOT3-207ENST00000496327 SETD5Q9C0A6 1442 aa24.97■■□□□ 1.59
CNOT3-207ENST00000496327 TRIM52Q96A61 297 aa24.97■■□□□ 1.59
CNOT3-207ENST00000496327 NOS1P29475 1434 aa24.95■■□□□ 1.59
CNOT3-207ENST00000496327 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
CNOT3-207ENST00000496327 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
CNOT3-207ENST00000496327 RAB3GAP2Q9H2M9 1393 aa24.89■■□□□ 1.57
CNOT3-207ENST00000496327 THEMISQ8N1K5 641 aaPredicted RBP24.87■■□□□ 1.57
CNOT3-207ENST00000496327 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
CNOT3-207ENST00000496327 SLC52A1Q9NWF4 448 aa24.87■■□□□ 1.57
CNOT3-207ENST00000496327 SYNMO15061 1565 aa24.87■■□□□ 1.57
CNOT3-207ENST00000496327 UGGT1Q9NYU2 1555 aa24.87■■□□□ 1.57
CNOT3-207ENST00000496327 E9PCH4 1651 aa24.86■■□□□ 1.57
CNOT3-207ENST00000496327 PLA2R1Q13018 1463 aa24.86■■□□□ 1.57
CNOT3-207ENST00000496327 IDI1Q13907 227 aa24.85■■□□□ 1.57
CNOT3-207ENST00000496327 PKD2Q13563 968 aa24.83■■□□□ 1.57
CNOT3-207ENST00000496327 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
CNOT3-207ENST00000496327 STAG3Q9UJ98 1225 aa24.81■■□□□ 1.56
CNOT3-207ENST00000496327 PTPRTO14522 1441 aa24.8■■□□□ 1.56
CNOT3-207ENST00000496327 HRCP23327 699 aa24.8■■□□□ 1.56
CNOT3-207ENST00000496327 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
CNOT3-207ENST00000496327 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
CNOT3-207ENST00000496327 NCKAP5LQ9HCH0 1330 aa24.78■■□□□ 1.56
CNOT3-207ENST00000496327 PIK3C2BO00750 1634 aa24.77■■□□□ 1.56
CNOT3-207ENST00000496327 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
CNOT3-207ENST00000496327 ANKLE2Q86XL3 938 aa24.76■■□□□ 1.55
CNOT3-207ENST00000496327 ADGRB3O60242 1522 aa24.75■■□□□ 1.55
CNOT3-207ENST00000496327 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
CNOT3-207ENST00000496327 UBR1Q8IWV7 1749 aa24.74■■□□□ 1.55
CNOT3-207ENST00000496327 TRPM2O94759 1503 aa24.72■■□□□ 1.55
CNOT3-207ENST00000496327 TMEM2Q9UHN6 1383 aa24.72■■□□□ 1.55
CNOT3-207ENST00000496327 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
CNOT3-207ENST00000496327 CHGAP10645 457 aaKnown RBP24.71■■□□□ 1.55
CNOT3-207ENST00000496327 SLIT1O75093 1534 aa24.71■■□□□ 1.55
CNOT3-207ENST00000496327 SPHKAPQ2M3C7 1700 aa24.7■■□□□ 1.54
CNOT3-207ENST00000496327 KDM5AP29375 1690 aaKnown RBP24.7■■□□□ 1.54
CNOT3-207ENST00000496327 FOXD1Q16676 465 aa24.7■■□□□ 1.54
CNOT3-207ENST00000496327 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
CNOT3-207ENST00000496327 SCAF11Q99590 1463 aaKnown RBP24.67■■□□□ 1.54
CNOT3-207ENST00000496327 TXNDC2Q86VQ3 553 aa24.67■■□□□ 1.54
CNOT3-207ENST00000496327 MED14O60244 1454 aa24.65■■□□□ 1.54
CNOT3-207ENST00000496327 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
CNOT3-207ENST00000496327 LTKP29376 864 aa24.65■■□□□ 1.54
CNOT3-207ENST00000496327 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
CNOT3-207ENST00000496327 TMEM131LA2VDJ0 1609 aa24.64■■□□□ 1.54
CNOT3-207ENST00000496327 CLTCL1P53675 1640 aa24.62■■□□□ 1.53
CNOT3-207ENST00000496327 RIMS2Q9UQ26 1411 aa24.61■■□□□ 1.53
CNOT3-207ENST00000496327 POLR1AO95602 1720 aaPredicted RBP24.61■■□□□ 1.53
CNOT3-207ENST00000496327 HDGFP51858 240 aaKnown RBP24.61■■□□□ 1.53
CNOT3-207ENST00000496327 ZFYVE9O95405 1425 aa24.61■■□□□ 1.53
CNOT3-207ENST00000496327 CCDC144AA2RUR9 1427 aa24.6■■□□□ 1.53
CNOT3-207ENST00000496327 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms